-
Notifications
You must be signed in to change notification settings - Fork 115
/
neXtProt_headers.txt
47 lines (47 loc) · 3.03 KB
/
neXtProt_headers.txt
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
ActiveSite Amino acid(s) directly involved in the activity of an enzyme
AntibodyMapping provides information as to whether an antibody mapping is "unique", "pseudo-unique" or "not unique" in a manner analogous to that of peptide mappings
BetaStrand Beta strand regions within the experimentally determined protein structure
BindingSite Binding site for any chemical group (co-enzyme, prosthetic group, etc.)
CalciumBindingRegion Position(s) of calcium binding region(s) within the protein
CleavageSite Cleavage site on the sequence
CoiledCoilRegion Positions of regions of coiled coil within the protein
CompositionallyBiasedRegion Region of compositional bias in the protein
CrossLink Residues participating in covalent linkage(s) between proteins
DisulfideBond Cysteine residues participating in disulfide bonds
DnaBindingRegion Position and type of a DNA-binding domain
Domain Position and type of each modular protein domain
DomainInfo Relevant information on protein domain(s)
GlycosylationSite Covalently attached glycan group(s)
Helix Helical regions within the experimentally determined protein structure
InitiatorMethionine Cleavage of the initiator methionine
InteractingRegion Region interacting with another macromolecule
IntramembraneRegion Intramembrane region
InteractionMapping Interaction Mapping
LipidationSite Lipidation: covalently attached lipid group(s)
MatureProtein Extent of an active peptide or a polypetide chain in the mature protein
MetalBindingSite Binding site for a metal ion
MiscellaneousRegion Region of interest in the sequence
MiscellaneousSite Interesting single amino acid site on the sequence
MitochondrialTransitPeptide Mitochondrial transit peptide
ModifiedResidue Modified residues
Mutagenesis Site which has been experimentally altered by mutagenesis
NonConsecutiveResidue Indicates that two residues in a sequence are not consecutive
NonTerminalResidue The sequence is incomplete. Indicate that a residue is not the terminal residue of the complete protein
NucleotidePhosphateBindingRegion Nucleotide phosphate binding region
PdbMapping Protein 3D structure
PeptideMapping Peptide mapping
PhenotypicVariation Phenotypic Variation
PeroxisomeTransitPeptide Peroxisome transit peptide
Propeptide Part of a protein that is cleaved during maturation or activation
PtmInfo Post-translational modifications
Repeat Positions of repeated sequence motifs or repeated domains
Selenocysteine Occurence of non-standard amino acids (selenocysteine and pyrrolysine) in the protein sequence
SequenceConflict Sequence discrepancies of unknown origin
ShortSequenceMotif Short (up to 20 amino acids) sequence motif of biological interest
SignalPeptide Sequence targeting proteins to the secretory pathway or periplasmic space
SrmPeptideMapping Srm peptide mapping
TopologicalDomain Location of non-membrane regions of membrane-spanning proteins
TransmembraneRegion Extent of a membrane-spanning region
Turn Turns within the experimentally determined protein structure
Variant Variant-specific annotations
ZincFingerRegion Position(s) and type(s) of zinc fingers within the protein