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Quick Question of Variants #31

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heeyounh opened this issue Mar 1, 2019 · 2 comments
Open

Quick Question of Variants #31

heeyounh opened this issue Mar 1, 2019 · 2 comments

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@heeyounh
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heeyounh commented Mar 1, 2019

In the title of each entry, some VariantComplex have no amino acid or * character.
What is that mean?
ex) VariantComplex=(298|298| ) in NX_W5XKT8-1

Thank you!

Regards,

Heeyoun Hwang
KBSI, Rep. of Korea

@edeutsch
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edeutsch commented Mar 1, 2019

In NX_W5XKT8-1, I see:
\VariantComplex=(112|112|)
This means that the amino acid at position 112 may be deleted (i.e. simply missing but the rest of the sequence goes on)

In NX_A0A075B6I0-1, I see:
\VariantSimple=......(61|*).......
This means that position 61 may be turned into a stop codon.

@heeyounh
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heeyounh commented Mar 1, 2019

Thank you very much for your quick reply!

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