From 30fae68b2165b1b4986cdbf1c891bfcefad5c083 Mon Sep 17 00:00:00 2001 From: anton083 Date: Thu, 26 Oct 2023 03:25:38 +0200 Subject: [PATCH] Update README.md --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 500d16f..93081a0 100644 --- a/README.md +++ b/README.md @@ -3,7 +3,7 @@ [![Build Status](https://github.com/MurrellGroup/AssigningSecondaryStructure.jl/actions/workflows/CI.yml/badge.svg?branch=main)](https://github.com/MurrellGroup/AssigningSecondaryStructure.jl/actions/workflows/CI.yml?query=branch%3Amain) [![Coverage](https://codecov.io/gh/MurrellGroup/AssigningSecondaryStructure.jl/branch/main/graph/badge.svg)](https://codecov.io/gh/MurrellGroup/AssigningSecondaryStructure.jl) -This package provides a to calculate the secondary structure using the [DSSP](https://swift.cmbi.umcn.nl/gv/dssp/) algorithm. The package was ported from the [PyDSSP](https://github.com/ShintaroMinami/PyDSSP) package. +This package provides a quick way to assign secondary structure using the [DSSP](https://swift.cmbi.umcn.nl/gv/dssp/) algorithm. The package was ported from the [PyDSSP](https://github.com/ShintaroMinami/PyDSSP) package. This is not a complete implementation of DSSP, as it only assigns '-' for loops, 'H' for alpha helices, and 'E' for beta strands. In spite of that, it matches the original DSSP to a large extent, with the added advantage of being more than 10x faster. For the full DSSP algorithm, check out [BioStructures.jl](https://github.com/BioJulia/BioStructures.jl) or [ProteinSecondaryStructures.jl](https://github.com/m3g/ProteinSecondaryStructures.jl), which both use the [DSSP_jll.jl](https://docs.juliahub.com/General/DSSP_jll/stable/) package that auto-generated using [BinaryBuilder.jl](https://github.com/JuliaPackaging/BinaryBuilder.jl).