diff --git a/pom.xml b/pom.xml index 362c65e..4fc3d28 100644 --- a/pom.xml +++ b/pom.xml @@ -72,12 +72,12 @@ org.springframework spring-web - 5.3.29 + 6.0.12 org.springframework spring-context-support - 5.3.29 + 6.0.12 com.fasterxml.jackson.core diff --git a/src/test/java/uk/ac/ebi/pride/utilities/ols/web/service/client/OLSClientTest.java b/src/test/java/uk/ac/ebi/pride/utilities/ols/web/service/client/OLSClientTest.java index 3dad021..09f7372 100644 --- a/src/test/java/uk/ac/ebi/pride/utilities/ols/web/service/client/OLSClientTest.java +++ b/src/test/java/uk/ac/ebi/pride/utilities/ols/web/service/client/OLSClientTest.java @@ -91,7 +91,7 @@ public void testGetTermChildrenByOBOIdMI() throws Exception { public void testGetTermParentsByOBOIdGo() throws Exception { List children = olsClient.getTermChildren(new Identifier("GO:0140110", Identifier.IdentifierType.OBO), "GO", 1); logger.debug(children.toString()); - Assert.assertTrue(contains(children, new Identifier("GO:0034246", Identifier.IdentifierType.OBO))); + Assert.assertTrue(contains(children, new Identifier("GO:0043856", Identifier.IdentifierType.OBO))); } @Test @@ -132,7 +132,7 @@ public void testGetTermsByAnnotationData() throws Exception { public void testGetTermParentsByOBOId() throws Exception { List parents = olsClient.getTermParents(new Identifier("GO:0034246", Identifier.IdentifierType.OBO), "GO", 1); logger.debug(parents.toString()); - Assert.assertTrue(contains(parents, new Identifier("GO:0140110", Identifier.IdentifierType.OBO))); + Assert.assertTrue(contains(parents, new Identifier("GO:0003700", Identifier.IdentifierType.OBO))); } @Test @@ -150,14 +150,14 @@ public void testGetTermParentsByOBOIdMI() throws Exception { public void testGetTermParentsByShortForm() throws Exception { List parents = olsClient.getTermParents(new Identifier("GO_0034246", Identifier.IdentifierType.OWL), "GO", 1); logger.debug(parents.toString()); - Assert.assertTrue(contains(parents, new Identifier("GO_0140110", Identifier.IdentifierType.OWL))); + Assert.assertTrue(contains(parents, new Identifier("GO_0006390", Identifier.IdentifierType.OWL))); } @Test public void testGetTermParentsByIrIId() throws Exception { List parents = olsClient.getTermParents(new Identifier("http://purl.obolibrary.org/obo/GO_0034246", Identifier.IdentifierType.IRI), "GO", 1); logger.debug(parents.toString()); - Assert.assertTrue(contains(parents, new Identifier("http://purl.obolibrary.org/obo/GO_0140110", Identifier.IdentifierType.IRI))); + Assert.assertTrue(contains(parents, new Identifier("http://purl.obolibrary.org/obo/GO_0003700", Identifier.IdentifierType.IRI))); } @Test @@ -244,7 +244,7 @@ public void testGetOntologyFromFilePath(){ // Assert.assertEquals(ontology.getNamespace(),"eol"); // ontology = olsClient.getOntologyFromFilePath(URI.create("http://www.bio.ntnu.no/ontology/GeXO/gexo.owl")); // Assert.assertEquals(ontology.getNamespace(),"gexo"); - ontology = olsClient.getOntologyFromFilePath(URI.create("http://purl.obolibrary.org/obo/go.owl")); + ontology = olsClient.getOntologyFromFilePath(URI.create("http://purl.obolibrary.org/obo/go/extensions/go-plus.owl")); Assert.assertEquals(ontology.getNamespace(),"go"); }