From 1297a72a274c71d87d64ae6f31f0e4d4635b232f Mon Sep 17 00:00:00 2001 From: fbdtemme Date: Tue, 20 Aug 2024 13:06:30 +0200 Subject: [PATCH 1/2] Fix some typos in the human-readable assay region names --- src/pixelator/resources/assays/D21.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/pixelator/resources/assays/D21.yaml b/src/pixelator/resources/assays/D21.yaml index e9b577d5..8401ee6d 100644 --- a/src/pixelator/resources/assays/D21.yaml +++ b/src/pixelator/resources/assays/D21.yaml @@ -40,7 +40,7 @@ assay_spec: - region_id: umi-b region_type: umi - name: Pixel binding site 1 + name: Unique molecular identifier B sequence_type: random sequence: NNNNNNNNNN min_len: 10 @@ -48,7 +48,7 @@ assay_spec: - region_id: bc region_type: barcode - name: barcode + name: Barcode sequence_type: random sequence: NNNNNNNN min_len: 8 From 5dcad08b59b913b425965401692c17dca78877b3 Mon Sep 17 00:00:00 2001 From: fbdtemme Date: Tue, 20 Aug 2024 13:07:27 +0200 Subject: [PATCH 2/2] Only install dev packages in dev container layer --- containers/dev.Dockerfile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/containers/dev.Dockerfile b/containers/dev.Dockerfile index a8aab25d..d6d4d7ae 100644 --- a/containers/dev.Dockerfile +++ b/containers/dev.Dockerfile @@ -13,6 +13,6 @@ WORKDIR /pixelator COPY ./ /pixelator COPY .git /pixelator/.git -RUN poetry export --output requirements.txt --without-hashes --no-interaction --no-ansi --with dev +RUN poetry export --output requirements.txt --without-hashes --no-interaction --no-ansi --only dev RUN pip3.11 install -r requirements.txt && rm requirements.txt