diff --git a/transforms/images/apply-flatfield-plugin/src/polus/plugins/transforms/images/apply_flatfield/apply_flatfield.py b/transforms/images/apply-flatfield-plugin/src/polus/plugins/transforms/images/apply_flatfield/apply_flatfield.py index 40e895a1c..d81ef71da 100644 --- a/transforms/images/apply-flatfield-plugin/src/polus/plugins/transforms/images/apply_flatfield/apply_flatfield.py +++ b/transforms/images/apply-flatfield-plugin/src/polus/plugins/transforms/images/apply_flatfield/apply_flatfield.py @@ -101,6 +101,10 @@ def _unshade_images( ff_path: path to the flatfield image df_path: path to the darkfield image """ + logger.info(f"Applying flatfield correction to {len(img_paths)} images ...") + logger.info(f"{ff_path.name = } ...") + logger.debug(f"Images: {img_paths}") + with bfio.BioReader(ff_path, max_workers=2) as bf: ff_image = bf[:, :, :, 0, 0].squeeze()