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CHANGELOG.md

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Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

Unreleased

7.1.2 2024-10-28

  • Bump fo-dicom from 5.1.3 to 5.1.4
  • Bump HIC.DicomTypeTranslation from 4.1.3 to 4.1.5

7.1.1 2024-10-16

  • Update to target RDMP v8.3.1
  • Bump Microsoft.Extensions.Logging.Console from 8.0.0 to 8.0.1
  • Bump NunitXml.TextLogger tfrom 4..0.254 to 4.1.0

7.1.0 2024-09-27

  • Bump HIC.DicomTypeTranslation from 4.1.2 to 4.1.3
  • Bump HIC.BadMedicine.Dicom from 0.1.0 to 0.1.1
  • Bump NLog from 5.3.2 to 5.3.4
  • Tidy attacher syntax/logic by @jas88 in #436

7.0.8 2024-08-01

  • Update to target RDMP v8.2.2

7.0.7 2024-07-24

  • Update to target RDMP version 8.2.1

7.0.6 2024-07-08

  • Updated to target RDMP version 8.2.0
  • Update for changed RDMP LoadMetaData API

7.0.5 2024-05-31

  • Implement CodeMeaning/CodeValue extraction for ICD11 support
  • Bump HIC.DicomTypeTranslation from 4.1.0 to 4.1.1

7.0.4 2024-04-08

  • Update RDMP API for new multi-load per catalogue

7.0.3 2024-03-28

  • Add ability to retry file fetch in FoDicomAnaonymiser
  • Bump .net7 to .net8
  • Fix issue with cross-platform file path mapping

7.0.2 2024-02-14

  • Fix issue with PutDicomFilesInExtractionDirectories option in FoDicom Pipeline Component

7.0.1

  • Documentation Update
  • Update to target RDMP version 8.1.0

7.0.0 2023-02-08

  • Replace SharpCompress 0.32.2 with LibArchive.net 0.1.3 due to LZMA bugs
  • Bump HIC.DicomTypeTranslation from 4.0.1 to 4.0.2
  • Bump HIC.RDMP.Plugin from 8.0.5 to 8.0.7
  • Bump Terminal.Gui from 1.8.2 to 1.9.0

6.0.2 2022-11-04

  • Documentation updates
  • Updated to target RDMP version 8.0.5
  • Update for changed CsvHelper API from RDMP

6.0.1 2022-09-27

  • Fixed issue running ExecuteCommandCreateNewImagingDatasetSuite when using a YamlRepository

6.0.0 2022-09-27

  • Updated to target RDMP version 8.0.0

5.0.12 2022-09-09

5.0.11 2022-08-24

Added

  • Added MetadataOnly property to FoDicomAnonymiser #64

5.0.10 2022-06-21

  • Refactored FoDicomAnonymiser to be easier for downstream consumption
  • Added HTTP Basic Authentication support to SemEHR API endpoint connection.

5.0.9 2022-05-27

  • Added SemEHR Request Timeout property so that the timeout setting can be changed as needed for longer running queries.

5.0.8 2022-05-04

Changed

  • Corrected resizing for the SemEHR API query builder - #236

5.0.7 2022-04-26

Changed

  • Bump SharpCompress from 0.30.1 to 0.31.0
  • Bump HIC.RDMP.Plugin from 7.0.9 to 7.0.10

5.0.6 2022-03-31

Added

  • Support for running CLI AddTag command for multiple Catalogues at once
  • Extend repertoire of archive formats to include 7zip, RAR, tar, bz2 via SharpCompress
  • New dependency: SharpCompress 0.30.1

Changed

  • Bump HIC.RDMP.Plugin from 7.0.7 to 7.0.9

5.0.5 2022-03-03

  • Bump HIC.RDMP.Plugin from 7.0.6 to 7.0.7

5.0.4 2022-02-04

  • Bump HIC.RDMP.Plugin from 7.0.5 to 7.0.6
  • Added support for ignoring validation errors in SSL certificates

5.0.3 2022-01-28

  • Bump HIC.RDMP.Plugin from 7.0.3 to 7.0.5

Added

  • Added SkipAnonymisationOnStructuredReports option to FoDicomAnonymiser

5.0.2 2021-11-15

  • Added periodic disposal in ZipPool to prevent too many open file handles at once.

5.0.1 2021-11-15

  • Bump HIC.RDMP.Plugin from 7.0.1 to 7.0.3
  • Added retry fields to FoDicomAnonymiser for when file system is unstable during extractions

5.0.0 2021-11-03

  • Added SemEHR cohort building prototype
  • Bump HIC.RDMP.Plugin from 6.0.1 to 6.0.2

4.0.2 2021-08-17

  • Bump HIC.RDMP.Plugin from 6.0.0 to 6.0.1
  • Added Verbose flag to PACSSource to cut down on logging

4.0.0 2021-07-29

  • Updated to work with RDMP 6.0 and FAnsi 2.0

3.0.1 2021-07-14

Changed

  • Bump NunitXml.TestLogger from 3.0.97 to 3.0.107
  • Bump HIC.RDMP.Plugin from 5.0.0 to 5.0.3

Added

  • Added support for customising DicomClient client settings in PACSSource caching component (e.g. AssociationLingerTimeoutInMs)
  • Added logging of association requests in PACSSource
  • Added new field MaximumAllowableAssociationEventsPerMinute for shutting down the executing process if the number of Association events crosses the given threshold

3.0.0 2021-06-05

Changed

  • Updated to RDMP 5.0.0 (dotnet5) plugin layout and API

Added

  • FoDicomAnonymiser checks now support automatic database creation/patching for UID mapping server

2.2.4 2021-03-08

Changed

  • When creating new imaging loads UseAllTableInfoInLoadAsFieldMap is enabled by default (improves load performance and stability)

Fixed

  • Fixed DLE not not loading files that are missing extensions when processing directory entries

2.2.3 2021-03-05

Changed

  • Bump HIC.RDMP.Plugin from 4.2.1 to 4.2.3
  • Bump HIC.DicomTypeTranslation from 2.3.1 to 2.3.2

Fixed

  • DLE now happily loads files on disk that are missing an extension e.g. USm123.213.432.234 (in the dicom standard the extension is optional)

2.2.2 2021-01-19

Fixed

  • Fixed bug with AutoRoutingAttacherWithPersistentRaw data load module when used with RDMP 4.2.1 API

2.2.1 2021-01-14

Updated to be compatible with RDMP 4.2

2.1.11 2020-09-18

Added

  • Added TimeoutInSeconds property to PrimaryKeyCollisionIsolationMutilation DLE module

2.1.10 2020-09-01

Added

  • Consecutively failing requests now result in delaying the fetch (incase server is busy with something)
  • Added retry on failure/warning when fetching from PACS

Fixed

  • In PACSSource TransferTimeOutInSeconds now applies only to the current study being fetched (not the whole hour)
  • Properly reported Warning and Cancel statuses in fetch request responses in PACSSource

2.1.9 2020-08-28

  • Refactor PACS fetch code with simpler queue handling
  • Run integration test against RDMP 4.1.8 not 4.1.0 due to API changes
  • Build plugin targetting .Net Standard 2.0 rather than deprecated Core 2.2

2.1.8 2020-08-25

  • Add local stub PACS in test package to enable further testing in future
  • Point existing Orthanc unit test at public PACS server for better coverage
  • Add unit tests to reproduce fixed issue below

Fixed

  • Handle duplicate object delivery better, to support retry scenario

Added

  • Added new command CompareImagingSchemas accessible from the Catalogue right click context menu. The command shows differences between a live database table and the template used to create it.
  • Added new command AddTag which adds a given dicom tag or typed column to the provided Catalogue (change is synced with RDMP and any _Archive tables)

2.1.7 2020-08-17

Fixed

  • Allow the PACS to send us lossy compressed versions if it wants, otherwise we won't be able to receive anything it has in that format

Added

  • Accept video (MPEG/HEVC) content if the PACS offers it
  • Added new cache source ProcessBasedCacheSource that calls out to a remote process

2.1.6 2020-06-17

Fixed

  • Fixed logging exception during C-MOVE retries

2.1.5 2020-06-03

Added

  • Single retry when ordering a C-MOVE fails

Fixed

  • Fixed issue with failed store requests hanging ordering

2.1.4 2020-05-26

  • Bugfix: respond correctly to far-end association release requests in CachingSCP
  • Revert 2.1.3's temporary workaround for the above issue

2.1.3 2020-05-21

Added

  • Add condition variable for CachingSCP to alert PACSSource when transfer completes
  • Added version number logging of plugin and fo-dicom

2.1.2 2020-05-18

Changed

  • Updated Networking API for PACSSource to latest (non deprecated) DicomClient

2.1.1 2020-05-11

Fixed

  • Reduced the number of instances of DicomClient being used in PACSSource

2.1.0 2020-05-05

Added

  • Added PostgresSql support in PrimaryKeyCollisionIsolationMutilation

Changed

  • Updated to RDMP 4.1.0
  • Updated to DicomTypeTranslation 2.2.0

2.0.9 2020-04-15

Added

  • Added tool to help visualize primary key collisions stored in an isolation table.

2.0.8 2020-03-27

  • Bump HIC.DicomTypeTranslation from 2.1.2 to 2.2.0
  • This includes an update to fo-dicom from 4.0.1 to 4.0.4

2.0.7 2020-02-05

Added

  • Support for zip file notation when loading dicoms from zip files (e.g. load only c:\myzip!1.dcm and c:\myzip!3.dcm )
  • Upgraded to latest RDMP release (4.0.2) ...

2.0.6 2020-01-06

Changed

  • PrimaryKeyCollisionIsolationMutilation now supports non string primary/foreign values.

Fixed

  • Fixed path in error messages from FoDicomAnonymiser (e.g. when failing to anonymize an image) to show full path
  • Fixed bug in PrimaryKeyCollisionIsolationMutilation when collisions occur in multiple sets of child records of a primary key.
  • Fixed bug in PrimaryKeyCollisionIsolationMutilation when child tables have collisions involving different parent foreign key references

2.0.5 2019-12-12

Added

  • Added better logging of error(s) in FoDicomAnonymiser (now includes file path of image failing)

Changed

  • DicomSource now expresses relative paths (where possible) with the ./ prefix e.g. ./subdir/1.dcm (previously subdir/1.dcm)

Fixed

  • Fixed relative path expression bug when loading an explicit file list (of dicoms). Bug caused file path to be expressed as filename only (i.e. no path)
  • Fixed DicomSource not expressing subdirectories of zip files (meaning it previously only worked when everything was in the root of the zip file).

2.0.4 2019-12-04

Changed

  • Upgraded to latest RDMP API (4.0.1)

2.0.3 2019-11-21

Changed

  • Updated to latest DicomTypeTranslation package
  • Upgraded to latest RDMP package

2.0.2 2019-11-13

Fixed

  • Fixed crash when setting ArchiveRoot to null on a DicomSource

2.0.1 2019-11-12

Added

  • Added support for Linux style paths e.g. archive "/archive/root" with subdir "series1/1.dcm"

Changed

  • Updated to RDMP 4.0.1-rc1
  • Local paths are now expressed without a leading "/" (e.g. series1/1.dcm when previously it would be /series1/1.dcm)
  • Database paths now use / instead of \ to work with both Windows and Linux

Fixed

  • Fixed bug in FoDicomAnonymiser when using a UID mapping repository with sql authentication (username/password)
  • Fixed ZipPool not working in case sensitive file systems (e.g. Linux)

1.3.2 2019-10-30

Changed

  • Updated to RDMP 3.2.1

1.3.1 2019-10-18

Added

  • Added linux x64 binaries to enable plugin to work from CLI engines running in linux hosts (e.g. data load engine)

Removed

  • Removed dlls that are already part of RDMP core application (e.g. Rdmp.Core.dll) from plugin archive

1.3.0 2019-09-13

Changed

  • Changed default source for load pipeline to files (previously JSON)
  • Updated to RDMP API 3.2

Removed

  • Removed 'Create With Default' button from image table creation user interface (All imaging table creation is now done through templates, there is no default).

1.1.0 - 2019-07-31

Added

  • Dicom reading pipeline components can now store Tag Elevation configuration using property TagElevationConfigurationXml (in the database). Previously the only option was to use an external file referenced by TagElevationConfigurationFile (this option is still available)

Changed

  • Updated to latest RDMP API (3.1.0)

1.0.2 - 2019-07-08

Added

  • Initial commit from private repo