DESCRIPTION

Package: MSstatsWeightedSummary
Type: Package
Title: Weighted Protein-Level Summarization for Protein Clusters
Version: 0.99.6
Authors@R: c(person("Mateusz", "Staniak", email = "mtst@mstaniak.pl", role = c("aut", "cre")))
Description: Protein-level summarization of feature (PSM)-level data is an important step
    in proteomics data analysis methods, including the MSstats workflow. MSstats and MSstatsTMT
    packages summarize features based on unique peptides. This package provides implements 
    a statistical method to jointly summarize clusters of proteins that share features 
    using weights specific to peptide-protein matches.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Imports: 
    parallel,
    IRanges,
    CVXR,
    NbClust,
    ggplot2,
    stringr,
    data.table,
    igraph,
    Biostrings,
    proxy,
    log4r,
    methods,
    survival
Suggests: 
    knitr,
    rmarkdown
VignetteBuilder: knitr
Depends: 
    R (>= 2.10)