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pyproject.toml
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pyproject.toml
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[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"
[project]
name = "mist"
version = "1.0.0"
authors = [
{ name="Lai Wenpu", email="kyzy850520@163.com" },
]
description = "MIST: an interpretable and flexible deep learning framework for single-T cell transcriptome and receptor analysis"
readme = "README.md"
license = {file = "LICENSE"}
requires-python = ">=3.7"
classifiers = [
'Development Status :: 3 - Alpha',
"Programming Language :: Python :: 3",
"License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
"Operating System :: OS Independent",
"Topic :: Scientific/Engineering :: Bio-Informatics",
"Intended Audience :: Science/Research",
# "Operating System :: MacOS :: MacOS X",
"Operating System :: Microsoft :: Windows",
"Operating System :: POSIX :: Linux",
]
dependencies = [
"numpy>=1.21.6",
"pandas>=1.3.5",
"anndata>=0.8.0",
"scipy>=1.7.3",
"scikit-learn>=1.0.2",
"scanpy>=1.9.3",
"scirpy>=0.12.0",
"torch>=1.13.0",
"einops>=0.6.0",
"tqdm>=4.64.1",
"prefetch_generator>=1.0.3",
"local-attention>=1.5.7",
"leidenalg>=0.10.2"
]
[project.scripts]
MIST = "mist.main:main"
[tool.setuptools]
package-data = { "mist" = ["doc/*.csv"] }
[tool.setuptools.packages.find]
where = ["mist"]
[project.urls]
"Homepage" = "https://github.com/aapupu/MIST"
# [tool.hatch.build.targets.wheel]
# ignore-vcs = true
# include = [
# "mist/**"
# ]