train.py

import matplotlib.pyplot as plt
import tensorflow as tf
import pandas as pd
import numpy as np
from sklearn.metrics import confusion_matrix
import time
from datetime import timedelta
import math
import dataset
import random
import PIL as Image

# Convolutional Layer 1.
filter_size1 = 3
num_filters1 = 32

# Convolutional Layer 2.
filter_size2 = 3
num_filters2 = 32

# Convolutional Layer 3.
filter_size3 = 3
num_filters3 = 64

# Fully-connected layer.
fc_size = 128             # Number of neurons in fully-connected layer.

# Number of color channels for the images: 1 channel for gray-scale.
num_channels = 3

# image dimensions (only squares for now)
img_size = 128

# Size of image when flattened to a single dimension
img_size_flat = img_size * img_size * num_channels

# Tuple with height and width of images used to reshape arrays.
img_shape = (img_size, img_size)

# class info

#classes as per your requirement
classes = ['pan', 'npan']
num_classes = len(classes)

# batch size
batch_size = 5

# validation split
validation_size = .2

# how long to wait after validation loss stops improving before terminating training
early_stopping = None  # use None if you don't want to implement early stoping


train_path='train'
test_path='test'


data = dataset.read_train_sets(train_path, img_size, classes, validation_size=validation_size)
test_images, test_ids = dataset.read_test_set(test_path, img_size,classes)

print("Size of:")
print("- Training-set:\t\t{}".format(len(data.train.labels)))
print("- Test-set:\t\t{}".format(len(test_images)))
print("- Validation-set:\t{}".format(len(data.valid.labels)))



def new_weights(shape):
    return tf.Variable(tf.truncated_normal(shape, stddev=0.05))

def new_biases(length):
    return tf.Variable(tf.constant(0.05, shape=[length]))



def new_conv_layer(input,              # The previous layer.
               num_input_channels, # Num. channels in prev. layer.
               filter_size,        # Width and height of each filter.
               num_filters,        # Number of filters.
               use_pooling=True):  # Use 2x2 max-pooling.

    # Shape of the filter-weights for the convolution.
    # This format is determined by the TensorFlow API.
    shape = [filter_size, filter_size, num_input_channels, num_filters]

    # Create new weights aka. filters with the given shape.
    weights = new_weights(shape=shape)

    # Create new biases, one for each filter.
    biases = new_biases(length=num_filters)

    # Create the TensorFlow operation for convolution.
    # Note the strides are set to 1 in all dimensions.
    # The first and last stride must always be 1,
    # because the first is for the image-number and
    # the last is for the input-channel.
    # But e.g. strides=[1, 2, 2, 1] would mean that the filter
    # is moved 2 pixels across the x- and y-axis of the image.
    # The padding is set to 'SAME' which means the input image
    # is padded with zeroes so the size of the output is the same.
    layer = tf.nn.conv2d(input=input,
    	             filter=weights,
    	             strides=[1, 1, 1, 1],
    	             padding='SAME')

    # Add the biases to the results of the convolution.
    # A bias-value is added to each filter-channel.
    layer += biases

    # Use pooling to down-sample the image resolution?
    if use_pooling:
        # This is 2x2 max-pooling, which means that we
        # consider 2x2 windows and select the largest value
        # in each window. Then we move 2 pixels to the next window.
        layer = tf.nn.max_pool(value=layer,
                               ksize=[1, 2, 2, 1],
                               strides=[1, 2, 2, 1],
                               padding='SAME')

    # Rectified Linear Unit (ReLU).
    # It calculates max(x, 0) for each input pixel x.
    # This adds some non-linearity to the formula and allows us
    # to learn more complicated functions.
    layer = tf.nn.relu(layer)

    # Note that ReLU is normally executed before the pooling,
    # but since relu(max_pool(x)) == max_pool(relu(x)) we can
    # save 75% of the relu-operations by max-pooling first.

    # We return both the resulting layer and the filter-weights
    # because we will plot the weights later.
    return layer, weights



def flatten_layer(layer):
    # Get the shape of the input layer.
    layer_shape = layer.get_shape()

    # The shape of the input layer is assumed to be:
    # layer_shape == [num_images, img_height, img_width, num_channels]

    # The number of features is: img_height * img_width * num_channels
    # We can use a function from TensorFlow to calculate this.
    num_features = layer_shape[1:4].num_elements()

    # Reshape the layer to [num_images, num_features].
    # Note that we just set the size of the second dimension
    # to num_features and the size of the first dimension to -1
    # which means the size in that dimension is calculated
    # so the total size of the tensor is unchanged from the reshaping.
    layer_flat = tf.reshape(layer, [-1, num_features])

    # The shape of the flattened layer is now:
    # [num_images, img_height * img_width * num_channels]

    # Return both the flattened layer and the number of features.
    return layer_flat, num_features


def new_fc_layer(input,          # The previous layer.
             num_inputs,     # Num. inputs from prev. layer.
             num_outputs,    # Num. outputs.
             use_relu=True): # Use Rectified Linear Unit (ReLU)?

    # Create new weights and biases.
    weights = new_weights(shape=[num_inputs, num_outputs])
    biases = new_biases(length=num_outputs)

    # Calculate the layer as the matrix multiplication of
    # the input and weights, and then add the bias-values.
    layer = tf.matmul(input, weights) + biases

    # Use ReLU?
    if use_relu:
        layer = tf.nn.relu(layer)

    return layer

session = tf.InteractiveSession()
#session = tf.Session()
x = tf.placeholder(tf.float32, shape=[None, img_size_flat], name='x')
x_image = tf.reshape(x, [-1, img_size, img_size, num_channels])

y_true = tf.placeholder(tf.float32, shape=[None, num_classes], name='y_true')
y_true_cls = tf.argmax(y_true, dimension=1)



layer_conv1, weights_conv1 = \
new_conv_layer(input=x_image,
               num_input_channels=num_channels,
               filter_size=filter_size1,
               num_filters=num_filters1,
               use_pooling=True)
#print("now layer2 input")
#print(layer_conv1.get_shape())
layer_conv2, weights_conv2 = \
new_conv_layer(input=layer_conv1,
               num_input_channels=num_filters1,
               filter_size=filter_size2,
               num_filters=num_filters2,
               use_pooling=True)
#print("now layer3 input")
#print(layer_conv2.get_shape())

layer_conv3, weights_conv3 = \
new_conv_layer(input=layer_conv2,
               num_input_channels=num_filters2,
               filter_size=filter_size3,
               num_filters=num_filters3,
               use_pooling=True)
#print("now layer flatten input")
#print(layer_conv3.get_shape())

layer_flat, num_features = flatten_layer(layer_conv3)

layer_fc1 = new_fc_layer(input=layer_flat,
                     num_inputs=num_features,
                     num_outputs=fc_size,
                     use_relu=True)

layer_fc2 = new_fc_layer(input=layer_fc1,
                     num_inputs=fc_size,
                     num_outputs=num_classes,
                     use_relu=False)

y_pred = tf.nn.softmax(layer_fc2)

y_pred_cls = tf.argmax(y_pred, dimension=1)
cross_entropy = tf.nn.softmax_cross_entropy_with_logits(logits=layer_fc2,
                                                    labels=y_true)
cost = tf.reduce_mean(cross_entropy)

optimizer = tf.train.AdamOptimizer(learning_rate=1e-4).minimize(cost)
correct_prediction = tf.equal(y_pred_cls, y_true_cls)
accuracy = tf.reduce_mean(tf.cast(correct_prediction, tf.float32))

#session.run(tf.global_variables_initializer()) # for newer versions
session.run(tf.global_variables_initializer()) # for older versions
train_batch_size = batch_size

def print_progress(epoch, feed_dict_train, feed_dict_validate, val_loss):
    # Calculate the accuracy on the training-set.
    acc = session.run(accuracy, feed_dict=feed_dict_train)
    val_acc = session.run(accuracy, feed_dict=feed_dict_validate)
    msg = "Epoch {0} --- Training Accuracy: {1:>6.1%}, Validation Accuracy: {2:>6.1%}, Validation Loss: {3:.3f}"
    print(msg.format(epoch + 1, acc, val_acc, val_loss))



total_iterations = 0

def optimize(num_iterations):
    # Ensure we update the global variable rather than a local copy.
    global total_iterations

    best_val_loss = float("inf")

    for i in range(total_iterations,
                   total_iterations + num_iterations):

        # Get a batch of training examples.
        # x_batch now holds a batch of images and
        # y_true_batch are the true labels for those images.
        x_batch, y_true_batch, _, cls_batch = data.train.next_batch(train_batch_size)
        x_valid_batch, y_valid_batch, _, valid_cls_batch = data.valid.next_batch(train_batch_size)

        # Convert shape from [num examples, rows, columns, depth]
        # to [num examples, flattened image shape]
        x_batch = x_batch.reshape(train_batch_size, img_size_flat)
        x_valid_batch = x_valid_batch.reshape(train_batch_size, img_size_flat)
        # Put the batch into a dict with the proper names
        # for placeholder variables in the TensorFlow graph.
        feed_dict_train = {x: x_batch,
                           y_true: y_true_batch}

        feed_dict_validate = {x: x_valid_batch,
                              y_true: y_valid_batch}

        # Run the optimizer using this batch of training data.
        # TensorFlow assigns the variables in feed_dict_train
        # to the placeholder variables and then runs the optimizer.
        session.run(optimizer, feed_dict=feed_dict_train)


        # Print status at end of each epoch (defined as full pass through training dataset).
        if i % int(data.train.num_examples/batch_size) == 0:
            val_loss = session.run(cost, feed_dict=feed_dict_validate)
            epoch = int(i / int(data.train.num_examples/batch_size))

            print_progress(epoch, feed_dict_train, feed_dict_validate, val_loss)


    # Update the total number of iterations performed.
    total_iterations += num_iterations


optimize(num_iterations=100)
#print_validation_accuracy()

y_pred = tf.nn.softmax(layer_fc2,name='y_pred')
saver = tf.train.Saver()
saver.save(session, 'F:\Akash\Invento\TensorFlow\Pan\Image Classification\my_test_model')