mkdocs.yml

site_name: nf-test
copyright: "© 2021 - 2023 Lukas Forer and Sebastian Schönherr"

theme:
  name: material
  features:
    - content.tooltips
    #- navigation.expand
    - navigation.footer
    - navigation.tabs
    #- navigation.tabs.sticky
    - search.highlight
    - search.share
    - search.suggest
    - toc.integrate
    - content.tabs.link
    - content.code.copy
  font:
    text: Segoe UI

  palette:
    primary: teal
    accent: teal
  icon:
    logo: material/rocket-launch
  favicon: images/favicon.svg

extra_css:
  - "style.css"

extra_javascript:
  - https://buttons.github.io/buttons.js

repo_url: https://github.com/askimed/nf-test

nav:
  - Home: index.md
  - Installation: installation.md
  - Documentation:
      - Getting Started: docs/getting-started.md
      - Writing Tests:
          - Pipeline Testing: docs/testcases/nextflow_pipeline.md
          - Workflow Testing: docs/testcases/nextflow_workflow.md
          - Process Testing: docs/testcases/nextflow_process.md
          - Function Testing: docs/testcases/nextflow_function.md
          - Params Dictionary: docs/testcases/params.md
          - Setup Method: docs/testcases/setup.md
          - Global Variables: docs/testcases/global_variables.md
      - Running Tests: docs/running-tests.md
      - Writing Assertions:
          - Power Assertions: docs/assertions/assertions.md
          - Files: docs/assertions/files.md
          - Snapshots: docs/assertions/snapshots.md
          - Regular Expressions: docs/assertions/regular-expressions.md
          - FASTA Files: docs/assertions/fasta.md
          - Using Third-Party Libraries: docs/assertions/libraries.md
      - Command Line Interface (CLI):
          - init: docs/cli/init.md
          - generate: docs/cli/generate.md
          - test: docs/cli/test.md
          - list: docs/cli/list.md
          - coverage: docs/cli/coverage.md
          - clean: docs/cli/clean.md
      - Configuration: docs/configuration.md
      - Plugins:
          - Using Plugins: docs/plugins/using-plugins.md
          - Developing Plugins: docs/plugins/developing-plugins.md
  - Plugins: https://plugins.nf-test.com
  - Tutorials: tutorials.md
  - Resources: resources.md
  - About: about.md

markdown_extensions:
  - admonition
  - pymdownx.details
  - pymdownx.superfences
  - pymdownx.tabbed:
      alternate_style: true
  - attr_list
  - pymdownx.emoji:
      emoji_index: !!python/name:materialx.emoji.twemoji
      emoji_generator: !!python/name:materialx.emoji.to_svg