diff --git a/tests/config/pytest_modules.yml b/tests/config/pytest_modules.yml
index 2ccbc93ab04..7b72ee9b4e0 100644
--- a/tests/config/pytest_modules.yml
+++ b/tests/config/pytest_modules.yml
@@ -622,9 +622,6 @@ gatk/unifiedgenotyper:
 gatk4/applyvqsr:
   - modules/nf-core/gatk4/applyvqsr/**
   - tests/modules/nf-core/gatk4/applyvqsr/**
-gatk4/bedtointervallist:
-  - modules/nf-core/gatk4/bedtointervallist/**
-  - tests/modules/nf-core/gatk4/bedtointervallist/**
 gatk4/calculatecontamination:
   - modules/nf-core/gatk4/calculatecontamination/**
   - tests/modules/nf-core/gatk4/calculatecontamination/**