From 68481d7fbffa0514490bc4c080422efc5b7395ca Mon Sep 17 00:00:00 2001 From: Riley Grant Date: Wed, 7 Aug 2024 16:59:09 -0500 Subject: [PATCH] fixup: add additional fields since .md file was created --- browser/help/topics/v4-browser-hts.md | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/browser/help/topics/v4-browser-hts.md b/browser/help/topics/v4-browser-hts.md index 72c29675f..4c764c604 100644 --- a/browser/help/topics/v4-browser-hts.md +++ b/browser/help/topics/v4-browser-hts.md @@ -129,6 +129,13 @@ Row fields: - `is_mane_select_version`: MANE Select version; has a value if this transcript is the MANE select transcript. - `refseq_id`: RefSeq ID associated with transcript. - `refseq_version`: RefSeq version. +- `caid`: The ClinGen Allele id associated with this variant +- `vrs`: Struct containing information about this variant in accordance with the [Variant Representation (VRS)](https://vrs.ga4gh.org/en/stable/) standard + - `ref`: Struct containing information about the reference allele + - `allele_id`: The unique Allele ID + - `start`: The start position of the Allele + - `end`: The end position of the Allele + - `state`: A VRS Sequence Expression that corresponds to the nucleotide or amino acid sequence of the Allele #### gnomAD v4.1. browser gene models Hail Table annotations