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Combined ES + GS data/ short and longreads in a single project #4024

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lynnpais opened this issue Apr 11, 2024 · 6 comments
Open

Combined ES + GS data/ short and longreads in a single project #4024

lynnpais opened this issue Apr 11, 2024 · 6 comments

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@lynnpais
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Combined ES + GS data/ short and longreads in a single project

@lynnpais
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Implement before PacBio longread data

@hanars
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hanars commented Jun 27, 2024

@Mo7ammedFarahat
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Does that means that seqr works now with LR VCF? from PacBio and ONT?

@hanars
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hanars commented Aug 16, 2024

Does that means that seqr works now with LR VCF? from PacBio and ONT?

No, we have planned work for early 2025 to support PacBio, which is blocked by this work

@Mo7ammedFarahat
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And what about ONT? And tertiary analysis?

@hanars
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hanars commented Aug 16, 2024

Those are not on our near-term roadmap, but as an open source project we are always willing to collaborate with other groups who are willing to contribute their developer time to build out seqr functionality

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