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new_disease_metadata_final_names.txt
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new_disease_metadata_final_names.txt
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disease_cat disease_name kept_genes n_samples Number_DEGs Number_sDEGs Percentage_aligned Library_size perplex1 optimal_perplex perplex3 icd10 icd9 tissue tissue_cat Library_sd Percentage_sd disease_cat_number dis_cat_colors tis_cat_colors new_dis_cat_colors final_disease_name
congenital anomalies AlagilleSyndrome 11737 10 1110 1 91.7 20989055.03344 2 3 2.5 Q44 759 liver Liver 1.87938723513916 1.14309521329882 1 blueviolet aquamarine #AEC6CC Alagille syndrome
congenital anomalies DownsSyndrome 10161 35 398 30 92.5914285714286 61549974.9784029 3 6 8 Q90 758 fibroblast Fibroblast 7.23490074747709 1.87982656092515 1 blueviolet royalblue #AEC6CC Down syndrome
congenital anomalies FamilialDysautonomia 13488 8 3863 1063 79.31875 31719527.167825 2 3 2 G90 742 psc-derived neural crest cells Brain 2.74836732721753 4.27533937667108 1 blueviolet fuchsia #AEC6CC Familial dysautonomia
diseases of the circulatory system Cardiomyopathy 12582 8 2940 133 90.3875 41337800.670325 2 3 2 I42 425 heart Heart 5.09254283922448 1.22642045924599 2 red gold #DD3232 Cardiomyopathy
diseases of the circulatory system FamilialPulmonaryArterialHypertension 11639 11 220 0 84.4454545454545 15065237.6797818 2 3 2.5 I27 416 iPS derived endothelial cells Brain 3.033451368459 3.13061132572015 2 red fuchsia #DD3232 Familial pulmonary arterial hypertension
diseases of the circulatory system Ischemia 10318 8 679 3 71.85 12420978.7622625 2 3 2 I25 414 cardiomyocites Heart 1.54548137953033 0.692820323027554 2 red gold #DD3232 Ischemia
diseases of the digestive system CoeliacDisease 11619 23 1703 0 88.395652173913 41457530.9965304 2 5 5.5 K90 579 cd4+ Intestine 12.4187367734882 2.14231783162527 3 springgreen1 olivedrab #FBAF5F Coeliac disease
diseases of the digestive system EosinophilicEsophagitis 11580 15 5903 5036 86.14 27012787.4189667 2 4 3.5 K20 530 esophagus Esophagus 25.7048259844794 2.29931666867727 3 springgreen1 peru #FBAF5F Eosinophilic esophagitis
diseases of the digestive system CrohnsDisease 14558 335 9183 8600 82.7053731343284 18983397.0000958 9 18 64 K50 555 Intestine_Colon_Ileon Intestine_Colon_Ileon 12.0951731455639 3.55587997832241 3 springgreen1 greenyellow #FBAF5F Crohn's disease
diseases of the digestive system UlcerativeColitis 13614 90 7861 7089 82.2194444444444 28824097.6419456 4 9 18.5 K51 556 colon Colon 15.3229740322632 4.58960534425129 3 springgreen1 red #FBAF5F Ulcerative colitis
diseases of the digestive system LymphocyticColitis 11940 8 1334 0 89.025 45885983.042275 2 3 2 K52 558 colorectal Colon 6.99611595682208 5.7270660651232 3 springgreen1 red #FBAF5F Lymphocytic colitis
diseases of the musculoskeletal system and connective tissue RheumatoidArthritis 10400 14 2953 0 83.95 15626363.1354571 2 4 3.5 M06 714 PBMC Blood 2.42887703678952 2.44280733835227 4 green4 grey #969A52 Rheumatoid arthritis
diseases of the musculoskeletal system and connective tissue SLE 11971 16 1137 1 82.2375 28756290.2046375 2 4 4 M32 710 blood Blood 10.3745264554588 2.83945417290014 4 green4 grey #969A52 Systemic lupus erythematosus
diseases of the nervous system and sense organs MultipleSclerosis 16798 9 2477 292 81.3 55481228.3333333 2 3 2 G35 340 optic chiasm Brain 5.83581215296631 1.8 5 magenta fuchsia #985396 Multiple sclerosis
diseases of the nervous system and sense organs AmyotrophicLateralSclerosis 12766 53 1497 2 84.1622641509434 32683018.1315755 4 7 11.5 G12 335 brain Brain 9.12460808334305 3.42845706578912 5 magenta fuchsia #985396 Amyotrophic lateral sclerosis
diseases of the nervous system and sense organs FacioscapulohumeralDystrophy 10975 23 590 0 87.0565217391304 121361711.368748 2 5 5.5 G71 359 muscle Muscle 21.1266897124691 1.25075471287485 5 magenta deepskyblue #985396 Facioscapulohumeral muscular dystrophy
diseases of the nervous system and sense organs FriedreichsAtaxia 11745 35 4321 2677 85.0885714285714 27843273.6659914 3 6 8 G11 334 patient derived fibroblast cell-lines Skin 3.08156622427897 3.88123475111688 5 magenta blueviolet #985396 Friedreich's ataxia
diseases of the nervous system and sense organs MuscularDystrophy 11677 19 1328 0 94.0157894736842 30475356.7107105 2 4 4.5 G71 359 dermal fibroblast Skin 6.20206904296268 0.610339757744028 5 magenta blueviolet #985396 Muscular dystrophy
diseases of the nervous system and sense organs ParkinsonsDisease 13400 95 5921 4502 86.7831578947368 35491043.9740632 5 10 20 G20 332 Brain_Fibroblast Brain_Fibroblast 14.8894033879169 3.2679505136875 5 magenta lightcoral #985396 Parkinson's disease
diseases of the nervous system and sense organs MyotonicDystrophy 12533 6 918 0 88.2833333333333 144747068.0966 1 2 1 G71 359 heart Heart 43.0602541018178 2.34129593743864 5 magenta gold #985396 Myotonic dystrophy
diseases of the nervous system and sense organs HuntingtonsDisease 13708 101 4694 2925 86.980198019802 44440767.2494139 5 10 21 G10 333 Brain Brain 41.2145287062123 2.75094601190137 5 magenta fuchsia #985396 Huntington's disease
diseases of the nervous system and sense organs Keratoconus 11616 15 222 0 84.8866666666667 40471701.0645667 2 4 3.5 H18 371 cornea Cornea 12.0733383824094 5.11885403842175 5 magenta coral #985396 Keratoconus
diseases of the respiratory system ChronicObstructivePulmonaryDisease 14119 189 8550 7918 84.7851851851852 32099018.3632561 7 14 37.5 J44 496 lung Lung 6.04919315202293 2.18154556586599 6 blue darkcyan #00619C Chronic obstructive pulmonary disease
diseases of the respiratory system Asthma 15733 85 3965 1236 87.5705882352941 26197967.1996894 4 9 18 J45 493 airway epithelial cells Airway 12.5535030809842 1.75626928251823 6 blue black #00619C Asthma
diseases of the respiratory system IdiopathicPulmonaryFibrosis 14335 37 7530 6519 77.4405405405405 32950199.7877216 3 6 8.5 J84 516 lung Lung 8.15121365134578 3.07340378258549 6 blue darkcyan #00619C Idiopathic pulmonary fibrosis
diseases of the digestive system Ulcer 15673 196 6276 4794 83.1999809162283 13766573.4234694 7 14 39 K25 569 ileon Ileon 5.74730128382912 2.95303798328441 3 springgreen1 olivedrab #FBAF5F Ulcer
infectious and parasitic diseases BorreliaBurdorferiInfection 12544 9 5957 4668 93.6777777777778 35420020.7678556 2 3 2 A69 88 infected astrocytes Brain 2.00670621955816 0.320264647509594 8 orange fuchsia #A1CE5E Borrelia burgdorferi infection
infectious and parasitic diseases HIV 11812 48 447 0 80.3729166666667 5169399.84194375 4 7 10.5 B20 42 intestinal epithelial Intestine 1.81699756066522 3.11223264931979 8 orange olivedrab #A1CE5E Human immunodeficiency virus infection
mental disorders Autism 14020 25 1261 5 81.116 47987649.274088 2 5 6 F84 299 neuron Brain 11.0011169798699 2.31528975868392 9 pink2 fuchsia #805462 Autism
mental disorders Smoker 11727 17 2452 623 92.6269607843137 39902878.7308118 2 4 4 F17 305 airway basal cell Airway 4.32867600061488 0.695293761681113 9 pink2 black #805462 Smoker
mental disorders Schizophrenia 12562 61 2419 349 79.6754098360656 15072999.7123885 4 8 13.5 F20 295 Brain Brain 18.688302780051 5.24250753417691 9 pink2 fuchsia #805462 Schizophrenia
mental disorders BipolarDisorder 13490 44 1515 0 76.6295454545455 4744352.85027727 4 7 10 F31 296 Brain Brain 0.186339443752408 3.95213098511009 9 pink2 fuchsia #805462 Bipolar disorder
mental disorders PosttraumaticStressDisorder 12150 104 533 0 88.5807014607689 23386328.7014808 5 10 21.5 F43 309 Blood Blood 12.1425641629054 1.10665821304575 9 pink2 grey #805462 Post-traumatic stress disorder
neoplasms AdenomatousPolyps 13410 30 3519 807 85.9733333333333 15663032.3516767 2 5 6.5 K63 211 colon Colon 2.03995022195908 3.36338636140601 10 grey red #FFB6AD Adenomatous polyps
neoplasms ChronicLymphocyticLeukemia 10651 44 2600 1027 82.125 23535567.4693864 4 7 10 C91 204 purified b cells Blood 9.37936278339192 4.19967468286062 10 grey grey #FFB6AD Chronic lymphocytic leukemia
neoplasms LiverCancer 12000 177 7320 6839 82.7621468926554 35054873.0550153 6 13 35 C22 155 liver Liver 26.1891732451022 6.61696313996306 10 grey aquamarine #FFB6AD Liver cancer
neoplasms LungCancer 13301 227 7958 7375 86.6379210778405 33982843.7849767 8 15 44.5 C34 162 Liver_Lung Liver_Lung 4.42797875779633 2.20082055404595 10 grey mediumturquoise #FFB6AD Lung cancer
neoplasms ColorectalCancer 7313 62 1756 835 85.4854838709677 16130176.2688113 4 8 13.5 C18 153 Colon Colon 7.17549971090436 6.21594620293033 10 grey red #FFB6AD Colorectal cancer
neoplasms KaposisSarcoma 13629 8 3937 1574 90.7125 12792518.371725 2 3 2 C46 176 ipsilateral Linfatic Node 1.28447285479137 2.56483778378728 10 grey springgreen #FFB6AD Kaposi's sarcoma
neoplasms HyperplasticPolyps 13303 30 5658 4287 86.3 15093936.6487533 2 5 6.5 K63 211 colon Colon 2.02608155662428 3.33910993715598 10 grey red #FFB6AD Hyperplastic polyps
neoplasms BreastCancer 13110 115 8903 8493 77.7758195430033 44897572.6709939 6 11 24 C50 174 breast Breast 4.87816073612548 2.52768794537743 10 grey brown #FFB6AD Breast cancer
neoplasms ThyroidCancer_Papillary 13618 22 3815 1513 86.3727272727273 41508290.1428455 2 5 5.5 C73 193 thyroid Thyroid 19.0501289111843 2.32587552755881 10 grey hotpink #FFB6AD Papillary thyroid cancer
neoplasms SessileSerratedPolyp 13496 22 4371 2746 85.5863636363636 15157253.7084545 2 5 5.5 K63 211 colon Colon 2.03174750579585 3.34212584963601 10 grey red #FFB6AD Sessile serrated polyps
neoplasms ProstateCancer 11262 26 655 0 79.4307692307692 34264796.3360808 2 5 6 C61 185 Prostate Prostate 35.9693159535584 4.80780775246009 10 grey blue #FFB6AD Prostate cancer
neoplasms Glioblastoma 13664 105 9133 8699 83.6107936507937 23630300.5407552 5 10 21.5 C71 191 brain Brain 8.47131928635539 3.20460237689115 10 grey fuchsia #FFB6AD Glioblastoma