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Clarification on hifiasm (HiC) #694

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JHCCoder opened this issue Aug 20, 2024 · 0 comments
Open

Clarification on hifiasm (HiC) #694

JHCCoder opened this issue Aug 20, 2024 · 0 comments

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@JHCCoder
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Hi hifiasm community,

I am looking to assemble a genome using single-sample hifiasm (HiC). From my understanding, it's best to use HiC reads from the same sample/individual from which the hifi reads are generated. Is this correct? However, what if you use HiC reads from another individual? Does it work in some cases (I imagine it could in some rare cases)?

@JHCCoder JHCCoder changed the title Clarification on hifiasm Clarification on hifiasm (HiC) Aug 20, 2024
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