- julia implementation of the recursive hash split instead of the nested list as in Geo Pertea as list takes and stores more memory.
- Original powerRanges from Geo Pertea are here https://github.com/gpertea/PowerRangesR and samples files are the same used in Geo Pertea GTF GENCODE Gencode
- i coded using the recursive split so that it becomes even faster and type declaration for linking the gene to transcript. Entire human genome annotation parsed in less than 5 minutes. visualGTF, which will give you the files with the Int64 parsed length estimated for the annotations and Makie plots.
- to use this powerrange.
include julia-powerranges.jl
Gaurav Sablok