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No support for fish shell #81

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robertmaynard opened this issue Jun 21, 2022 · 2 comments
Open
1 task done

No support for fish shell #81

robertmaynard opened this issue Jun 21, 2022 · 2 comments
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bug Something isn't working

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@robertmaynard
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Solution to issue cannot be found in the documentation.

  • I checked the documentation.

Issue

When using the conda-forge compiler toolchain under a bash shell the activation scripts add enviornment variables such as CXXFLAGS, LDFLAGS, CMAKE_PREFIX_PATH, etc. When the same enviornment is activated in a fish shell no such variables exist causing conda builds to fail.

We should have consistent environments across all shells that conda supports. Otherwise we don't have reproducible builds between shells.

Installed packages

_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                       2_gnu    conda-forge
_sysroot_linux-64_curr_repodata_hack 3                   h5bd9786_13    conda-forge
abseil-cpp                20211102.0           h27087fc_1    conda-forge
aiobotocore               2.3.3              pyhd8ed1ab_0    conda-forge
aiohttp                   3.8.1           py310h5764c6d_1    conda-forge
aioitertools              0.10.0             pyhd8ed1ab_0    conda-forge
aiosignal                 1.2.0              pyhd8ed1ab_0    conda-forge
arrow-cpp                 7.0.0           py310h8cf3212_7_cuda    conda-forge
arrow-cpp-proc            3.0.0                      cuda    conda-forge
async-timeout             4.0.2              pyhd8ed1ab_0    conda-forge
attrs                     21.4.0             pyhd8ed1ab_0    conda-forge
aws-c-cal                 0.5.11               h95a6274_0    conda-forge
aws-c-common              0.6.2                h7f98852_0    conda-forge
aws-c-event-stream        0.2.7               h3541f99_13    conda-forge
aws-c-io                  0.10.5               hfb6a706_0    conda-forge
aws-checksums             0.1.11               ha31a3da_7    conda-forge
aws-sdk-cpp               1.8.186              hb4091e7_3    conda-forge
binutils                  2.36.1               hdd6e379_2    conda-forge
binutils_impl_linux-64    2.36.1               h193b22a_2    conda-forge
binutils_linux-64         2.36                hf3e587d_10    conda-forge
botocore                  1.24.21            pyhd8ed1ab_1    conda-forge
brotlipy                  0.7.0           py310h5764c6d_1004    conda-forge
bzip2                     1.0.8                h7f98852_4    conda-forge
c-ares                    1.18.1               h7f98852_0    conda-forge
c-compiler                1.3.0                h7f98852_0    conda-forge
ca-certificates           2022.5.18.1          ha878542_0    conda-forge
certifi                   2022.5.18.1     py310hff52083_0    conda-forge
cffi                      1.15.0          py310h0fdd8cc_0    conda-forge
charset-normalizer        2.0.12             pyhd8ed1ab_0    conda-forge
cmake                     3.23.2               h5432695_0    conda-forge
cryptography              37.0.2          py310h597c629_0    conda-forge
cudatoolkit               11.5.1               hcf5317a_9    nvidia
cxx-compiler              1.3.0                h4bd325d_0    conda-forge
expat                     2.4.8                h27087fc_0    conda-forge
frozenlist                1.3.0           py310h5764c6d_1    conda-forge
fsspec                    2022.5.0           pyhd8ed1ab_0    conda-forge
gcc                       9.4.0               h192d537_10    conda-forge
gcc_impl_linux-64         9.4.0               h03d3576_16    conda-forge
gcc_linux-64              9.4.0               h391b98a_10    conda-forge
gflags                    2.2.2             he1b5a44_1004    conda-forge
glog                      0.6.0                h6f12383_0    conda-forge
grpc-cpp                  1.46.3               hc275302_0    conda-forge
gxx                       9.4.0               h192d537_10    conda-forge
gxx_impl_linux-64         9.4.0               h03d3576_16    conda-forge
gxx_linux-64              9.4.0               h0316aca_10    conda-forge
heapdict                  1.0.1                    pypi_0    pypi
idna                      3.3                pyhd8ed1ab_0    conda-forge
jmespath                  1.0.0              pyhd8ed1ab_0    conda-forge
kernel-headers_linux-64   3.10.0              h4a8ded7_13    conda-forge
keyutils                  1.6.1                h166bdaf_0    conda-forge
krb5                      1.19.3               h3790be6_0    conda-forge
ld_impl_linux-64          2.36.1               hea4e1c9_2    conda-forge
libblas                   3.9.0           15_linux64_openblas    conda-forge
libbrotlicommon           1.0.9                h166bdaf_7    conda-forge
libbrotlidec              1.0.9                h166bdaf_7    conda-forge
libbrotlienc              1.0.9                h166bdaf_7    conda-forge
libcblas                  3.9.0           15_linux64_openblas    conda-forge
libcrc32c                 1.1.2                h9c3ff4c_0    conda-forge
libcurl                   7.83.1               h7bff187_0    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libev                     4.33                 h516909a_1    conda-forge
libevent                  2.1.10               h9b69904_4    conda-forge
libffi                    3.4.2                h7f98852_5    conda-forge
libgcc-devel_linux-64     9.4.0               hd854feb_16    conda-forge
libgcc-ng                 12.1.0              h8d9b700_16    conda-forge
libgfortran-ng            12.1.0              h69a702a_16    conda-forge
libgfortran5              12.1.0              hdcd56e2_16    conda-forge
libgomp                   12.1.0              h8d9b700_16    conda-forge
libgoogle-cloud           1.40.2               hefc27d0_0    conda-forge
liblapack                 3.9.0           15_linux64_openblas    conda-forge
libllvm11                 11.1.0               hf817b99_3    conda-forge
libnghttp2                1.47.0               h727a467_0    conda-forge
libnsl                    2.0.0                h7f98852_0    conda-forge
libopenblas               0.3.20          pthreads_h78a6416_0    conda-forge
libprotobuf               3.20.1               h6239696_0    conda-forge
libsanitizer              9.4.0               h79bfe98_16    conda-forge
libssh2                   1.10.0               ha56f1ee_2    conda-forge
libstdcxx-devel_linux-64  9.4.0               hd854feb_16    conda-forge
libstdcxx-ng              12.1.0              ha89aaad_16    conda-forge
libthrift                 0.16.0               h519c5ea_1    conda-forge
libutf8proc               2.7.0                h7f98852_0    conda-forge
libuuid                   2.32.1            h7f98852_1000    conda-forge
libuv                     1.43.0               h7f98852_0    conda-forge
libzlib                   1.2.12               h166bdaf_0    conda-forge
llvmlite                  0.38.1          py310h58363a5_0    conda-forge
lz4-c                     1.9.3                h9c3ff4c_1    conda-forge
multidict                 6.0.2           py310h5764c6d_1    conda-forge
ncurses                   6.3                  h27087fc_1    conda-forge
numba                     0.55.1          py310ha5257ce_1    conda-forge
numpy                     1.21.6          py310h45f3432_0    conda-forge
openssl                   1.1.1o               h166bdaf_0    conda-forge
orc                       1.7.3                h6c59b99_1    conda-forge
pip                       22.1.2             pyhd8ed1ab_0    conda-forge
ptxcompiler               0.2.0           py310h51d44e1_0    rapidsai
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pyopenssl                 22.0.0             pyhd8ed1ab_0    conda-forge
pyorc                     0.6.0                    pypi_0    pypi
pysocks                   1.7.1           py310hff52083_5    conda-forge
python                    3.10.5          h582c2e5_0_cpython    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python_abi                3.10                    2_cp310    conda-forge
re2                       2022.04.01           h27087fc_0    conda-forge
readline                  8.1.2                h0f457ee_0    conda-forge
rhash                     1.4.1                h7f98852_0    conda-forge
s2n                       1.0.10               h9b69904_0    conda-forge
s3fs                      2022.5.0           pyhd8ed1ab_0    conda-forge
setuptools                62.3.4          py310hff52083_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
snappy                    1.1.9                hbd366e4_1    conda-forge
sqlite                    3.38.5               h4ff8645_0    conda-forge
streamz                   0.6.3                    pypi_0    pypi
sysroot_linux-64          2.17                h4a8ded7_13    conda-forge
tk                        8.6.12               h27826a3_0    conda-forge
toolz                     0.11.2                   pypi_0    pypi
tornado                   6.1                      pypi_0    pypi
typing-extensions         4.2.0                hd8ed1ab_1    conda-forge
typing_extensions         4.2.0              pyha770c72_1    conda-forge
tzdata                    2022a                h191b570_0    conda-forge
urllib3                   1.26.9             pyhd8ed1ab_0    conda-forge
wheel                     0.37.1             pyhd8ed1ab_0    conda-forge
wrapt                     1.14.1          py310h5764c6d_0    conda-forge
xz                        5.2.5                h516909a_1    conda-forge
yarl                      1.7.2           py310h5764c6d_2    conda-forge
zict                      2.2.0                    pypi_0    pypi
zlib                      1.2.12               h166bdaf_0    conda-forge
zstd                      1.5.2                h8a70e8d_1    conda-forge

Environment info

active environment : cudf_dev
    active env location : /home/rmaynard/anaconda3/envs/cudf_dev
            shell level : 1
       user config file : /home/rmaynard/.condarc
 populated config files : /home/rmaynard/.condarc
          conda version : 4.12.0
    conda-build version : 3.21.8
         python version : 3.9.12.final.0
       virtual packages : __cuda=11.6=0
                          __linux=5.4.0=0
                          __glibc=2.31=0
                          __unix=0=0
                          __archspec=1=x86_64
       base environment : /home/rmaynard/anaconda3  (writable)
      conda av data dir : /home/rmaynard/anaconda3/etc/conda
  conda av metadata url : None
           channel URLs : https://conda.anaconda.org/conda-forge/linux-64
                          https://conda.anaconda.org/conda-forge/noarch
                          https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /home/rmaynard/anaconda3/pkgs
                          /home/rmaynard/.conda/pkgs
       envs directories : /home/rmaynard/anaconda3/envs
                          /home/rmaynard/.conda/envs
               platform : linux-64
             user-agent : conda/4.12.0 requests/2.27.1 CPython/3.9.12 Linux/5.4.0-120-generic ubuntu/20.04.4 glibc/2.31
                UID:GID : 1000:1000
             netrc file : None
           offline mode : False
@robertmaynard robertmaynard added the bug Something isn't working label Jun 21, 2022
@jakirkham
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Some potentially related upstream issues:

@isuruf
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isuruf commented Jun 22, 2022

PRs are welcome to add .fish equivalents.

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@robertmaynard @jakirkham @isuruf