Broken miniforge on mac ARM 15.1 #671
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Can you post your |
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Here are the outputs you requested. Though now, none of my conda envs are working in PyCharm, all of them are gone and it reroot Python to the base environment. ❯ conda config --show-sources
==> /Users/macos/miniforge3/.condarc <==
channels:
- conda-forge
==> /Users/macos/.condarc <==
channels:
- conda-forge
- pytorch
- https://repo.anaconda.com/pkgs/main
- https://repo.anaconda.com/pkgs/r❯ which -a conda
conda () {
local cmd="${1-__missing__}"
case "$cmd" in
(activate | deactivate) __conda_activate "$@" ;;
(install | update | upgrade | remove | uninstall) __conda_exe "$@" || return
__conda_reactivate ;;
(*) __conda_exe "$@" ;;
esac
}
/Users/macos/miniforge3/condabin/condaIn my zshrc profile# Enable Powerlevel10k instant prompt. Should stay close to the top of ~/.zshrc.
# Initialization code that may require console input (password prompts, [y/n]
# confirmations, etc.) must go above this block; everything else may go below.
if [[ -r "${XDG_CACHE_HOME:-$HOME/.cache}/p10k-instant-prompt-${(%):-%n}.zsh" ]]; then
source "${XDG_CACHE_HOME:-$HOME/.cache}/p10k-instant-prompt-${(%):-%n}.zsh"
fi
# Path to your oh-my-zsh installation.
export ZSH="$HOME/.oh-my-zsh"
# Set name of the theme to load --- if set to "random", it will
# load a random theme each time oh-my-zsh is loaded, in which case,
# to know which specific one was loaded, run: echo $RANDOM_THEME
# See https://github.com/ohmyzsh/ohmyzsh/wiki/Themes
ZSH_THEME="powerlevel10k/powerlevel10k"
# Set list of themes to pick from when loading at random
# Setting this variable when ZSH_THEME=random will cause zsh to load
# a theme from this variable instead of looking in $ZSH/themes/
# If set to an empty array, this variable will have no effect.
# ZSH_THEME_RANDOM_CANDIDATES=( "robbyrussell" "agnoster" )
# Uncomment the following line to use case-sensitive completion.
# CASE_SENSITIVE="true"
# Uncomment the following line to use hyphen-insensitive completion.
# Case-sensitive completion must be off. _ and - will be interchangeable.
# HYPHEN_INSENSITIVE="true"
# Uncomment one of the following lines to change the auto-update behavior
# zstyle ':omz:update' mode disabled # disable automatic updates
zstyle ':omz:update' mode auto # update automatically without asking
# zstyle ':omz:update' mode reminder # just remind me to update when it's time
# Uncomment the following line to change how often to auto-update (in days).
# zstyle ':omz:update' frequency 13
# Values accepted (min: 1, max: 16)
# Parallel downloads will not be enabled if value is out-of-range
ZSH_CUSTOM_AUTOUPDATE_NUM_WORKERS=10
# Uncomment the following line if pasting URLs and other text is messed up.
# DISABLE_MAGIC_FUNCTIONS="true"
# Uncomment the following line to disable colors in ls.
# DISABLE_LS_COLORS="true"
# Uncomment the following line to disable auto-setting terminal title.
# DISABLE_AUTO_TITLE="true"
# Uncomment the following line to enable command auto-correction.
# ENABLE_CORRECTION="true"
# Uncomment the following line to display red dots whilst waiting for completion.
# You can also set it to another string to have that shown instead of the default red dots.
# e.g. COMPLETION_WAITING_DOTS="%F{yellow}waiting...%f"
# Caution: this setting can cause issues with multiline prompts in zsh < 5.7.1 (see #5765)
# COMPLETION_WAITING_DOTS="true"
# Uncomment the following line if you want to disable marking untracked files
# under VCS as dirty. This makes repository status check for large repositories
# much, much faster.
# DISABLE_UNTRACKED_FILES_DIRTY="true"
# Uncomment the following line if you want to change the command execution time
# stamp shown in the history command output.
# You can set one of the optional three formats:
# "mm/dd/yyyy"|"dd.mm.yyyy"|"yyyy-mm-dd"
# or set a custom format using the strftime function format specifications,
# see 'man strftime' for details.
# HIST_STAMPS="mm/dd/yyyy"
# Would you like to use another custom folder than $ZSH/custom?
# ZSH_CUSTOM=/path/to/new-custom-folder
# Which plugins would you like to load?
# Standard plugins can be found in $ZSH/plugins/
# Custom plugins may be added to $ZSH_CUSTOM/plugins/
# Example format: plugins=(rails git textmate ruby lighthouse)
# Add wisely, as too many plugins slow down shell startup.
plugins=(git zsh-autosuggestions)
source $ZSH/oh-my-zsh.sh
# User configuration
# export MANPATH="/usr/local/man:$MANPATH"
# You may need to manually set your language environment
# export LANG=en_US.UTF-8
# Preferred editor for local and remote sessions
# if [[ -n $SSH_CONNECTION ]]; then
# export EDITOR='vim'
# else
# export EDITOR='mvim'
# fi
# Compilation flags
# export ARCHFLAGS="-arch x86_64"
# Set personal aliases, overriding those provided by oh-my-zsh libs,
# plugins, and themes. Aliases can be placed here, though oh-my-zsh
# users are encouraged to define aliases within the ZSH_CUSTOM folder.
# For a full list of active aliases, run `alias`.
#
# Example aliases
# alias zshconfig="mate ~/.zshrc"
# alias ohmyzsh="mate ~/.oh-my-zsh"
# Fig post block. Keep at the bottom of this file.
[[ -f "$HOME/.fig/shell/zshrc.post.zsh" ]] && builtin source "$HOME/.fig/shell/zshrc.post.zsh"
# To customize prompt, run `p10k configure` or edit ~/.p10k.zsh.
[[ ! -f ~/.p10k.zsh ]] || source ~/.p10k.zsh
source /Users/macos/zsh-syntax-highlighting/zsh-syntax-highlighting.zsh
source ~/powerlevel10k/powerlevel10k.zsh-theme
# export PATH="/Users/macos/miniforge3/bin:$PATH" # commented out by conda initialize # commented out by conda initialize
# >>> conda initialize >>>
# !! Contents within this block are managed by 'conda init' !!
__conda_setup="$('/Users/macos/miniforge3/bin/conda' 'shell.zsh' 'hook' 2> /dev/null)"
if [ $? -eq 0 ]; then
eval "$__conda_setup"
else
if [ -f "/Users/macos/miniforge3/etc/profile.d/conda.sh" ]; then
. "/Users/macos/miniforge3/etc/profile.d/conda.sh"
else
export PATH="/Users/macos/miniforge3/bin:$PATH"
fi
fi
unset __conda_setup
# <<< conda initialize <<<
##### Activate conda env ######
[[ -n $CONDA_ENV ]] && conda activate $CONDA_ENV
___MY_VMOPTIONS_SHELL_FILE="${HOME}/.jetbrains.vmoptions.sh"; if [ -f "${___MY_VMOPTIONS_SHELL_FILE}" ]; then . "${___MY_VMOPTIONS_SHELL_FILE}"; fi
c |
2 tasks
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Yea all that looks normal. 🤔 I wonder if there's another Python installation getting in the way. The Let's try this: |
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In ❯ which python
/Users/macos/miniforge3/bin/python
❯ python -c "import tqdm"
❯ python -c "import conda" |
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Though now when trying to update or activate base or my envs, this error message comes in every time: ❯ conda update --all
Channels:
- conda-forge
- pytorch
- defaults
Platform: osx-arm64
Collecting package metadata (repodata.json): done
Solving environment: done
## Package Plan ##
environment location: /Users/macos/miniforge3
The following packages will be downloaded:
package | build
---------------------------|-----------------
cpp-expected-1.1.0 | hffc8910_0 23 KB conda-forge
libmamba-2.0.2 | hc61166f_2 1.4 MB conda-forge
mamba-2.0.2 | h232bcfd_2 384 KB conda-forge
simdjson-3.10.1 | h7b3277c_0 196 KB conda-forge
spdlog-1.14.1 | h6d8af72_1 160 KB conda-forge
------------------------------------------------------------
Total: 2.1 MB
The following NEW packages will be INSTALLED:
cpp-expected conda-forge/osx-arm64::cpp-expected-1.1.0-hffc8910_0
nlohmann_json conda-forge/osx-arm64::nlohmann_json-3.11.3-h00cdb27_1
simdjson conda-forge/osx-arm64::simdjson-3.10.1-h7b3277c_0
spdlog conda-forge/osx-arm64::spdlog-1.14.1-h6d8af72_1
The following packages will be UPDATED:
brotli-python 1.1.0-py310h1253130_1 --> 1.1.0-py310hb4ad77e_2
bzip2 1.0.8-h93a5062_5 --> 1.0.8-h99b78c6_7
c-ares 1.28.1-h93a5062_0 --> 1.34.2-h7ab814d_0
cffi 1.16.0-py310hdcd7c05_0 --> 1.17.1-py310h497396d_0
charset-normalizer 3.3.2-pyhd8ed1ab_0 --> 3.4.0-pyhd8ed1ab_0
icu 73.2-hc8870d7_0 --> 75.1-hfee45f7_0
idna 3.6-pyhd8ed1ab_0 --> 3.10-pyhd8ed1ab_0
jsonpointer 2.4-py310hbe9552e_3 --> 3.0.0-py310hbe9552e_1
krb5 1.21.2-h92f50d5_0 --> 1.21.3-h237132a_0
libarchive 3.7.2-hcacb583_1 --> 3.7.4-h83d404f_0
libcurl 8.7.1-h2d989ff_0 --> 8.10.1-h13a7ad3_0
libcxx 16.0.6-h4653b0c_0 --> 19.1.3-ha82da77_0
libmamba 1.5.10-h66a2e1b_1 --> 2.0.2-hc61166f_2
libsolv 0.7.28-h1059232_2 --> 0.7.30-h6c9b7f8_0
lzo 2.10-h642e427_1000 --> 2.10-h93a5062_1001
mamba 1.5.10-py310ha5d4528_1 --> 2.0.2-h232bcfd_2
ncurses 6.4.20240210-h078ce10_0 --> 6.5-h7bae524_1
pip 24.0-pyhd8ed1ab_0 --> 24.3.1-pyh8b19718_0
python_abi 3.10-4_cp310 --> 3.10-5_cp310
requests 2.31.0-pyhd8ed1ab_0 --> 2.32.3-pyhd8ed1ab_0
ruamel.yaml 0.18.6-py310hd125d64_0 --> 0.18.6-py310hf9df320_1
truststore 0.8.0-pyhd8ed1ab_0 --> 0.10.0-pyhd8ed1ab_0
tzdata 2024a-h0c530f3_0 --> 2024b-hc8b5060_0
urllib3 2.2.1-pyhd8ed1ab_0 --> 2.2.3-pyhd8ed1ab_0
wheel 0.43.0-pyhd8ed1ab_1 --> 0.44.0-pyhd8ed1ab_0
zstd 1.5.5-h4f39d0f_0 --> 1.5.6-hb46c0d2_0
Proceed ([y]/n)? y
Downloading and Extracting Packages:
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
Error while loading conda entry point: conda-libmamba-solver (dlopen(/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/bindings.cpython-310-darwin.so, 0x0002): Library not loaded: @rpath/libicuuc.73.dylib
Referenced from: <139DF8BD-07DF-3953-8431-A702E7213958> /Users/macos/miniforge3/lib/libxml2.2.dylib
Reason: tried: '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/../../../libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/../../../libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/bin/../lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/bin/../lib/libicuuc.73.dylib' (no such file), '/usr/local/lib/libicuuc.73.dylib' (no such file), '/usr/lib/libicuuc.73.dylib' (no such file, not in dyld cache))
Error while loading conda entry point: conda-libmamba-solver (dlopen(/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/bindings.cpython-310-darwin.so, 0x0002): Library not loaded: @rpath/libicuuc.73.dylib
Referenced from: <139DF8BD-07DF-3953-8431-A702E7213958> /Users/macos/miniforge3/lib/libxml2.2.dylib
Reason: tried: '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/../../../libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/../../../libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/bin/../lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/bin/../lib/libicuuc.73.dylib' (no such file), '/usr/local/lib/libicuuc.73.dylib' (no such file), '/usr/lib/libicuuc.73.dylib' (no such file, not in dyld cache))❯ conda activate pytest
Error while loading conda entry point: conda-libmamba-solver (dlopen(/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/bindings.cpython-310-darwin.so, 0x0002): Library not loaded: @rpath/libicuuc.73.dylib
Referenced from: <139DF8BD-07DF-3953-8431-A702E7213958> /Users/macos/miniforge3/lib/libxml2.2.dylib
Reason: tried: '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/../../../libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/../../../libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/bin/../lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/bin/../lib/libicuuc.73.dylib' (no such file), '/usr/local/lib/libicuuc.73.dylib' (no such file), '/usr/lib/libicuuc.73.dylib' (no such file, not in dyld cache))
Error while loading conda entry point: conda-libmamba-solver (dlopen(/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/bindings.cpython-310-darwin.so, 0x0002): Library not loaded: @rpath/libicuuc.73.dylib
Referenced from: <139DF8BD-07DF-3953-8431-A702E7213958> /Users/macos/miniforge3/lib/libxml2.2.dylib
Reason: tried: '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/../../../libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/../../../libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/bin/../lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/bin/../lib/libicuuc.73.dylib' (no such file), '/usr/local/lib/libicuuc.73.dylib' (no such file), '/usr/lib/libicuuc.73.dylib' (no such file, not in dyld cache)) |
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Hm, I don't understand how you could update to mamba 2.0 without a change in conda-libmamba-solver 🤔 |
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No idea...but everything started once Tried to update ❯ conda update conda-libmamba-solver
Error while loading conda entry point: conda-libmamba-solver (dlopen(/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/bindings.cpython-310-darwin.so, 0x0002): Library not loaded: @rpath/libicuuc.73.dylib
Referenced from: <139DF8BD-07DF-3953-8431-A702E7213958> /Users/macos/miniforge3/lib/libxml2.2.dylib
Reason: tried: '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/../../../libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/../../../libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/bin/../lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/bin/../lib/libicuuc.73.dylib' (no such file), '/usr/local/lib/libicuuc.73.dylib' (no such file), '/usr/lib/libicuuc.73.dylib' (no such file, not in dyld cache))
Error while loading conda entry point: conda-libmamba-solver (dlopen(/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/bindings.cpython-310-darwin.so, 0x0002): Library not loaded: @rpath/libicuuc.73.dylib
Referenced from: <139DF8BD-07DF-3953-8431-A702E7213958> /Users/macos/miniforge3/lib/libxml2.2.dylib
Reason: tried: '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/../../../libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/lib/python3.10/site-packages/libmambapy/../../../libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/bin/../lib/libicuuc.73.dylib' (no such file), '/Users/macos/miniforge3/bin/../lib/libicuuc.73.dylib' (no such file), '/usr/local/lib/libicuuc.73.dylib' (no such file), '/usr/lib/libicuuc.73.dylib' (no such file, not in dyld cache))
/Users/macos/miniforge3/lib/python3.10/site-packages/conda_package_streaming/package_streaming.py:25: UserWarning: zstandard could not be imported. Running without .conda support.
warnings.warn("zstandard could not be imported. Running without .conda support.")
/Users/macos/miniforge3/lib/python3.10/site-packages/conda_package_handling/api.py:29: UserWarning: Install zstandard Python bindings for .conda support
_warnings.warn("Install zstandard Python bindings for .conda support")
Retrieving notices: ...working... done
CondaValueError: You have chosen a non-default solver backend (libmamba) but it was not recognized. Choose one of: classicThis is without updating to ❯ conda --version
conda 24.9.2
❯ which python
/Users/macos/miniforge3/envs/pytest/bin/python
❯ python -c "import matplotlib"
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/Users/macos/miniforge3/envs/pytest/lib/python3.11/site-packages/matplotlib/__init__.py", line 159, in <module>
from . import _api, _version, cbook, _docstring, rcsetup
File "/Users/macos/miniforge3/envs/pytest/lib/python3.11/site-packages/matplotlib/rcsetup.py", line 28, in <module>
from matplotlib.colors import Colormap, is_color_like
File "/Users/macos/miniforge3/envs/pytest/lib/python3.11/site-packages/matplotlib/colors.py", line 52, in <module>
from PIL import Image
File "/Users/macos/miniforge3/envs/pytest/lib/python3.11/site-packages/PIL/Image.py", line 97, in <module>
from . import _imaging as core
ImportError: dlopen(/Users/macos/miniforge3/envs/pytest/lib/python3.11/site-packages/PIL/_imaging.cpython-311-darwin.so, 0x0002): Library not loaded: @rpath/libjpeg.8.dylib
Referenced from: <CA655B27-1443-3A07-99EA-01CD6342789B> /Users/macos/miniforge3/envs/pytest/lib/python3.11/site-packages/PIL/_imaging.cpython-311-darwin.so
Reason: tried: '/Users/macos/miniforge3/envs/pytest/lib/python3.11/site-packages/PIL/../../../libjpeg.8.dylib' (no such file), '/Users/macos/miniforge3/envs/pytest/lib/python3.11/site-packages/PIL/../../../libjpeg.8.dylib' (no such file), '/Users/macos/miniforge3/envs/pytest/bin/../lib/libjpeg.8.dylib' (no such file), '/Users/macos/miniforge3/envs/pytest/bin/../lib/libjpeg.8.dylib' (no such file), '/usr/local/lib/libjpeg.8.dylib' (no such file), '/usr/lib/libjpeg.8.dylib' (no such file, not in dyld cache)
❯ conda install matplotlib
Channels:
- conda-forge
- pytorch
- defaults
Platform: osx-arm64
Collecting package metadata (repodata.json): done
Solving environment: done
# All requested packages already installed.On other envs, the error is different even though ❯ conda activate Pyenv_arm
❯ python -c "import matplotlib"
zsh: command not found: python |
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Solution to issue cannot be found in the documentation.
Issue
Since you updated
miniforgeto 24.9.0, I have this bug on macOS 15.1 where I cannot activate any of my envs nor updatebase, each command returns the following error message:Error message
I tried with
miniconda, no issue whatsoever. I uninstalledminiforgeand reinstalled version 24.3.0, the above error message seems to be gone but every time I runwhich condaorwhere condathe following appears:which conda
Any idea why these errors are thrown?
Installed packages
Environment info
The text was updated successfully, but these errors were encountered: