No pdfs generated

[tshah31]

Hi,

I seem to have successfully run the analyses but do not seem to have any of the pdf output files, with no obvious error either. Could you help suggest what I need to trouble shoot in order to get the final outputs. Attached is my error.log file.
Thanks
error.log

[smirarab]

I need a bit more information to help. What is the command you ran? Did you check the "results" directory? I agree there is no detectable bug. So, probably, it generated results, but in a directory you are not looking at?

…

On Mon, Nov 22, 2021 at 9:18 AM tshah31 ***@***.***> wrote: Hi, I seem to have successfully run the analyses but do not seem to have any of the pdf output files, with no obvious error either. Could you help suggest what I need to trouble shoot in order to get the final outputs. Attached is my error.log file. Thanks error.log <https://github.com/esayyari/DiscoVista/files/7583068/error.log> — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#17>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAGJXODPMH54YOXTD62TWJTUNJ3PNANCNFSM5IRRAKGQ> . Triage notifications on the go with GitHub Mobile for iOS <https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675> or Android <https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub>.

-- Siavash Mirarab

[tshah31]

I managed to resolve it. The issues were two-fold:

1. There was an irregular character in my taxon names which Astral did not like.
2. R version 4.0 or above is required to produce all the figures/ pdfs.
   Thanks for your reply.