diff --git a/modules/subworkflows/lastz.nf b/modules/subworkflows/lastz.nf
index 19516b5..e44894b 100644
--- a/modules/subworkflows/lastz.nf
+++ b/modules/subworkflows/lastz.nf
@@ -14,7 +14,7 @@ if (params.distance == 'near'){
 }
 
 //include {lastz_near; lastz_medium; lastz_far; lastz_custom} from "../processes/lastz"
-include {axtchain; chainMerge; chainNet; liftover; chain2maf} from "../processes/postprocess"
+include {axtchain; chainMerge; chainNet; liftover; chain2maf; netSynt; chainsubset} from "../processes/postprocess"
 
 // Create lastz alignments workflow
 workflow LASTZ {
diff --git a/modules/subworkflows/minimap2.nf b/modules/subworkflows/minimap2.nf
index 9e79703..cc80f59 100644
--- a/modules/subworkflows/minimap2.nf
+++ b/modules/subworkflows/minimap2.nf
@@ -8,7 +8,7 @@ if (params.distance == 'near'){
 } else if (params.distance == 'custom') {
     include {minimap2_custom as minimap2} from '../processes/minimap2'
 }
-include {axtchain; chainMerge; chainNet; liftover; chain2maf} from "../processes/postprocess"
+include {axtchain; chainMerge; chainNet; liftover; chain2maf; netSynt; chainsubset} from "../processes/postprocess"
 
 // Create minimap2 alignments workflow
 workflow MINIMAP2 {