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The tutorial has BAM/BED files with X instead of chrX. This apparently causes issues with visualizing on IGV (maybe older versions). Replacing X with chrX in all files should fix any issues with incompatibilities.
The tutorial has BAM/BED files with
X
instead ofchrX
. This apparently causes issues with visualizing on IGV (maybe older versions). ReplacingX
withchrX
in all files should fix any issues with incompatibilities.https://github.com/galaxyproject/training-material/tree/main/topics/epigenetics/tutorials/formation_of_super-structures_on_xi
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