From 71469033a795f16eb49e454acee6082fb655041e Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Luc=C3=ADa=20Pe=C3=B1a-P=C3=A9rez?= Date: Thu, 17 Oct 2024 11:14:48 +0200 Subject: [PATCH] Apply suggestions from code review Co-authored-by: Felix Lenner <52530259+fellen31@users.noreply.github.com> --- modules/local/drop_put_together_exported_couts.nf | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/modules/local/drop_put_together_exported_couts.nf b/modules/local/drop_put_together_exported_couts.nf index 768c965..b8e63a7 100644 --- a/modules/local/drop_put_together_exported_couts.nf +++ b/modules/local/drop_put_together_exported_couts.nf @@ -1,5 +1,5 @@ process DROP_PUT_TOGETHER_EXPORTED_COUNTS { - tag "DROP_put_together_exported_couts" + tag "DROP_put_together_exported_counts" label 'process_low' // Exit if running this module with -profile conda / -profile mamba @@ -39,7 +39,7 @@ process DROP_PUT_TOGETHER_EXPORTED_COUNTS { mv exported_counts/sample_annotation.tsv . - $baseDir/bin/drop_sample_annot_exported_counts.py \\ + drop_sample_annot_exported_counts.py \\ --sample_annot "sample_annotation.tsv" \\ --ae_run $ae_run \\ --as_run $as_run \\ @@ -47,7 +47,7 @@ process DROP_PUT_TOGETHER_EXPORTED_COUNTS { cat <<-END_VERSIONS > versions.yml "${task.process}": - drop_sample_annotation_exported_counts: \$(\$baseDir/bin/drop_sample_annotation_exported_counts.py --version ) + drop_sample_annotation_exported_counts: \$(drop_sample_annotation_exported_counts.py --version) END_VERSIONS """ @@ -58,7 +58,7 @@ process DROP_PUT_TOGETHER_EXPORTED_COUNTS { cat <<-END_VERSIONS > versions.yml "${task.process}": - drop_sample_annotation_exported_counts: \$(\$baseDir/bin/drop_sample_annotation_exported_counts.py --version ) + drop_sample_annotation_exported_counts: \$(drop_sample_annotation_exported_counts.py --version) END_VERSIONS """ }