competitive_genotyping.inputs.json

{
    "CompetitiveGenotyping.assembly_list": "/storage1/fs1/ccdg/Active/analysis/ref_grant/assembly_analysis_20200220/competitive_genotyping_round1/assembly_list.txt",
    "CompetitiveGenotyping.dataset_list": "/storage1/fs1/ccdg/Active/analysis/ref_grant/assembly_analysis_20200220/competitive_genotyping_round1/dataset_list.txt",
    "CompetitiveGenotyping.ref": "/scratch1/fs1/ccdg/aregier/GCA_000001405.15_GRCh38_no_alt_analysis_set.fna",
    "CompetitiveGenotyping.ref_index": "/scratch1/fs1/ccdg/aregier/GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.fai",
    "CompetitiveGenotyping.ref_name": "GRCh38",
    "CompetitiveGenotyping.segdup_bed": "/scratch1/fs1/ccdg/aregier/genomicSuperDups.b38.sorted.bed",
    "CompetitiveGenotyping.str_bed": "/scratch1/fs1/ccdg/aregier/simpleRepeat.b38.sorted.bed"
}