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Hi, I recently messaged the author of this repo via LinkedIn. He informed me there was not a formal process he followed to build this tool.
However, I think you can cite the databases he used to build the model, this github repo, as well as take a look at the U-Net architecture and write it down on your paper. That way, it will be clear to readers the steps taken to build DeepBrain. That is actually what I am doing in my dissertation project, since I want to use DeepBrain to skull strip my MRIs.
The reply to this issue goes into implementation details a bit more: #5
Thanks a lot for sharing the nice code!
And when I use this code for brain extraction, which papers should I add as references?
Thanks, have a nice day: )
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