forked from sklarman/Big-Mechanism-Assembly
-
Notifications
You must be signed in to change notification settings - Fork 0
/
UNO.owl
630 lines (378 loc) · 28.5 KB
/
UNO.owl
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
<?xml version="1.0"?>
<rdf:RDF xmlns="http://purl.bioontology.org/net/brunel/uno#"
xml:base="http://purl.bioontology.org/net/brunel/uno"
xmlns:panda="http://purl.bioontology.org/net/brunel/panda#"
xmlns:void="http://rdfs.org/ns/void#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:xml="http://www.w3.org/XML/1998/namespace"
xmlns:uno="http://purl.bioontology.org/net/brunel/uno#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:skos="http://www.w3.org/2004/02/skos/core#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:obo="http://purl.obolibrary.org/obo/"
xmlns:dc="http://purl.org/dc/elements/1.1/">
<owl:Ontology rdf:about="http://purl.bioontology.org/net/brunel/uno">
<owl:imports rdf:resource="http://purl.obolibrary.org/obo/external/iao_import.owl"/>
<owl:versionInfo>0.9.0</owl:versionInfo>
<dc:title xml:lang="en">Uncertainty Ontology</dc:title>
<void:dataBrowse rdf:resource="http://purl.bioontology.org/net/brunel/uno.graph"/>
<dc:subject xml:lang="en">uncertainty</dc:subject>
<dc:contributor rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://klarman.synthasite.com/</dc:contributor>
<skos:prefLabel>uno</skos:prefLabel>
<void:dataDump rdf:resource="http://purl.bioontology.org/net/brunel/uno.owl"/>
<skos:altLabel>uno</skos:altLabel>
<skos:definition>Uncertainty Ontology (UNO) has been developed in the context of the DARPA's Big Mechanism research program. It describes different types of uncertainty that are relevant in the process of knowledge assembly of biological models from molecular interactions described in and extracted from scientific texts.</skos:definition>
<dc:creator rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.brunel.ac.uk/people/larisa-soldatova</dc:creator>
</owl:Ontology>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Annotation properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.bioontology.org/net/brunel/uno#hasSynonym -->
<owl:AnnotationProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasSynonym">
<rdfs:label xml:lang="en">has synonym</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.org/dc/elements/1.1/contributor -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/contributor"/>
<!-- http://purl.org/dc/elements/1.1/creator -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/creator"/>
<!-- http://purl.org/dc/elements/1.1/description -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/description"/>
<!-- http://purl.org/dc/elements/1.1/subject -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/subject"/>
<!-- http://purl.org/dc/elements/1.1/title -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/title"/>
<!-- http://www.w3.org/2004/02/skos/core#altLabel -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#altLabel"/>
<!-- http://www.w3.org/2004/02/skos/core#definition -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#definition"/>
<!-- http://www.w3.org/2004/02/skos/core#prefLabel -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2004/02/skos/core#prefLabel"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Object Properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.bioontology.org/net/brunel/uno#hasAssemblyUncertainty -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasAssemblyUncertainty">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToAssemblyUncertainty"/>
<rdfs:comment>associates assembly uncertainty degree with an event</rdfs:comment>
<rdfs:label>has assembly uncertainty</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasBiologicalUncertainty -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasBiologicalUncertainty">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToBiology"/>
<rdfs:comment>associates biological uncertainty degree with an event</rdfs:comment>
<rdfs:label>has biological uncertainty</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasDocumentPartUncertainty -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasDocumentPartUncertainty">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToDocumentPart"/>
<rdfs:comment>associates a score reflecting the uncertainty of the document part from which a statement has been extracted with a given statement</rdfs:comment>
<rdfs:label>has document part uncertainty</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasExtractionAccurracy -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasExtractionAccurracy">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#AccuracyOfExtractionFromText"/>
<rdfs:comment>associates extraction accurracy score with an extracted statement</rdfs:comment>
<rdfs:label>has extraction accuracy</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasGroundingUncertainty -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasGroundingUncertainty">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToEntityGrounding"/>
<rdfs:label>has grounding uncertainty</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasInternalInconsistency -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasInternalInconsistency">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToEvidenceInconsistency"/>
<rdfs:comment>associates the score reflecting inconsistency of supporting/conflicting evidence with an event</rdfs:comment>
<rdfs:label>has internal inconsistency</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasModelLinkUncertainty -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasModelLinkUncertainty">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToLinkUncertainty"/>
<rdfs:comment>associates uncertainty score reflecting the relation of an event to a model</rdfs:comment>
<rdfs:label>has model link uncertainty</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasNegativeConflict -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasNegativeConflict">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasModelLinkUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#NegativeConflict"/>
<rdfs:label>has negative conflict</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasNegativeCorroboration -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasNegativeCorroboration">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasModelLinkUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#NegativeCorroboration"/>
<rdfs:label>has negative corroboration</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasPositiveConflict -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasPositiveConflict">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasModelLinkUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#PositiveConflict"/>
<rdfs:label>has positive conflict</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasPositiveCorroboration -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasPositiveCorroboration">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasModelLinkUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#PositiveCorroboration"/>
<rdfs:label>has positive corroboration</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasProvenanceUncertainty -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasProvenanceUncertainty">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToDocumentProvenance"/>
<rdfs:comment>associates provenance uncertainty score with a document from which a statement was extracted</rdfs:comment>
<rdfs:label>has provenance uncertainty</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasTextualUncertainty -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasTextualUncertainty">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#TextualUncertainty"/>
<rdfs:comment>associates textual uncertainty score with an extracted statement</rdfs:comment>
<rdfs:label>has textual uncertainty</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasTotalNegativeUncertainty -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasTotalNegativeUncertainty">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasTotalUncertainty"/>
<rdfs:label>has total negative uncertainty</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasTotalPositiveUncertainty -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasTotalPositiveUncertainty">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasTotalUncertainty"/>
<rdfs:label>has total positive uncertainty</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasTotalUncertainty -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasTotalUncertainty">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasUncertainty"/>
<rdfs:comment>associates total uncertainty levels with an event</rdfs:comment>
<rdfs:label>has total uncertainty</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasTrustDegree -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasTrustDegree">
<rdfs:subPropertyOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasUncertainty"/>
<rdfs:range rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToSubmitterTrust"/>
<rdfs:comment>associates a trust degree with a submitter</rdfs:comment>
<rdfs:label>has trust degree</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasUncertainty -->
<owl:ObjectProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasUncertainty">
<rdfs:comment>associates a uncertainty object with a statement</rdfs:comment>
<rdfs:label>has uncertainty</rdfs:label>
</owl:ObjectProperty>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Data properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.bioontology.org/net/brunel/uno#hasUncertaintyLevel -->
<owl:DatatypeProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasUncertaintyLevel">
<rdfs:comment>associates uncertainty level with a uncertainty object</rdfs:comment>
<rdfs:label>has uncertainty level</rdfs:label>
</owl:DatatypeProperty>
<!-- http://purl.bioontology.org/net/brunel/uno#hasUncertaintyLevelDescritpion -->
<owl:DatatypeProperty rdf:about="http://purl.bioontology.org/net/brunel/uno#hasUncertaintyLevelDescritpion">
<rdfs:comment>associates uncertainty level description (free text form if applicable) with a uncertainty object</rdfs:comment>
<rdfs:label>has uncertainty level descritpion</rdfs:label>
</owl:DatatypeProperty>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Classes
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.bioontology.org/net/brunel/uno#AccuracyOfExtractionFromText -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#AccuracyOfExtractionFromText">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#Uncertainty"/>
<hasSynonym>extraction uncertainty</hasSynonym>
<rdfs:label xml:lang="en">accuracy of extraction from text</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#NegativeConflict -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#NegativeConflict">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToLinkUncertainty"/>
<rdfs:comment>The event is not in the model but is found to be true in the evidence.
Suggested action => add the event to the model.</rdfs:comment>
<rdfs:label>negative conflict</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#NegativeCorroboration -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#NegativeCorroboration">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToLinkUncertainty"/>
<rdfs:comment>The event is not in the model and is found to be false in the evidence.
Action is not required.</rdfs:comment>
<rdfs:label>negative corroboration</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#PositiveConflict -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#PositiveConflict">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToLinkUncertainty"/>
<rdfs:comment>The event is in the model but is found to be false in the evidence.
Suggested action => remove the event from the model.</rdfs:comment>
<rdfs:label>positive conflict</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#PositiveCorroboration -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#PositiveCorroboration">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToLinkUncertainty"/>
<rdfs:comment>The event is in the model and is found to be true in the evidence.
Action is not required.</rdfs:comment>
<rdfs:label>positive corroboration</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#Probability -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#Probability">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
<rdfs:label>probability</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#TextualUncertainty -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#TextualUncertainty">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#Uncertainty"/>
<rdfs:label xml:lang="en">textual uncertainty</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#TotalNegativeUncertainty -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#TotalNegativeUncertainty">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#TotalUncertainty"/>
<rdfs:comment>Reflects the total uncertainty of the negation of an event being true (the probability of all the negative evidence being true and all the positive evidence being false).</rdfs:comment>
<rdfs:label>total negative uncertainty</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#TotalPositiveUncertainty -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#TotalPositiveUncertainty">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#TotalUncertainty"/>
<rdfs:comment>Reflects the total uncertainty of an event being true (the probability of all the positive evidence being true and all the negative evidence being false).</rdfs:comment>
<rdfs:label>total positive uncertainty</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#TotalUncertainty -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#TotalUncertainty">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#Uncertainty"/>
<rdfs:comment>Captures the apparent truth/falsity of events relative to the entire positive/negative evidence supporting events that has been identified.</rdfs:comment>
<rdfs:label>total uncertainty</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#Uncertainty -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#Uncertainty">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.bioontology.org/net/brunel/uno#hasUncertaintyLevel"/>
<owl:someValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:label xml:lang="en">uncertainty</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToAssemblyUncertainty -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToAssemblyUncertainty">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#Uncertainty"/>
<rdfs:label>uncertainty relevant to assembly process</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToAuthorsIndependence -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToAuthorsIndependence">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToTheIndependenceAcrossResearchNetwork"/>
<hasSynonym>authors independence uncertainty</hasSynonym>
<rdfs:label xml:lang="en">uncertainty relevant to authors independence</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToBiology -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToBiology">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#Uncertainty"/>
<hasSynonym>biological uncertainty</hasSynonym>
<rdfs:label xml:lang="en">uncertainty relevant to biology</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToDocumentPart -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToDocumentPart">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#Uncertainty"/>
<rdfs:comment>The weight of event extracted from a given document might differ depending on exactly which part of the document it was extracted from (e.g., abstract, results, related work, etc.)</rdfs:comment>
<rdfs:label>uncertainty relevant to document part</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToDocumentProvenance -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToDocumentProvenance">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToInformationProvenance"/>
<rdfs:label xml:lang="en">uncertainty relevant to document provenance</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToEntityGrounding -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToEntityGrounding">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#Uncertainty"/>
<rdfs:comment>The entities mentioned in a statement are grounded in existing databases with certain confidence. This probability uncertainty type reflects the level of that confidence.</rdfs:comment>
<rdfs:label>uncertainty relevant to entity grounding</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToEvidenceInconsistency -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToEvidenceInconsistency">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToEvidenceSupport"/>
<rdfs:comment>The extracted pieces of evidence can often be inconsistent with each other. This uncertainty type captures such type of inconsistency expressed numerically.</rdfs:comment>
<rdfs:label>uncertainty relevant to evidence inconsistency</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToEvidenceSupport -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToEvidenceSupport">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#Uncertainty"/>
<rdfs:comment>This type of uncertainty capture cumulative expressions of support provided by evidence (extracted or experimental) to biological events.</rdfs:comment>
<rdfs:label>uncertainty relevant to evidence support</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToExperimentalConfirmation -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToExperimentalConfirmation">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToBiology"/>
<rdfs:label xml:lang="en">uncertainty relevant to experimental confirmation</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToInformationProvenance -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToInformationProvenance">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#Uncertainty"/>
<hasSynonym>provenance uncertainty</hasSynonym>
<rdfs:label>uncertainty relevant to information provenance</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToLinkUncertainty -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToLinkUncertainty">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#Uncertainty"/>
<rdfs:comment>The uncertainty scores that quantify the strength and type of relation of an event extracted from text to a model. </rdfs:comment>
<rdfs:label>uncertainty relevant to link uncertainty</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToMethodsIndependence -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToMethodsIndependence">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToTheIndependenceAcrossResearchNetwork"/>
<hasSynonym>methods independence uncertainty</hasSynonym>
<rdfs:label xml:lang="en">uncertainty relevant to methods independence</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToPriorBiologicalKnowledge -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToPriorBiologicalKnowledge">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToBiology"/>
<rdfs:label xml:lang="en">uncertainty relevant to prior biological knowledge</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToProvenanceIndependence -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToProvenanceIndependence">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToTheIndependenceAcrossResearchNetwork"/>
<hasSynonym>provenance independence uncertainty</hasSynonym>
<rdfs:label xml:lang="en">uncertainty relevant to provenance independence</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToSubmitterTrust -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToSubmitterTrust">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#Uncertainty"/>
<rdfs:comment>The degree to which a given submitter is trusted.</rdfs:comment>
<rdfs:label>uncertainty relevant to submitter trust</rdfs:label>
</owl:Class>
<!-- http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToTheIndependenceAcrossResearchNetwork -->
<owl:Class rdf:about="http://purl.bioontology.org/net/brunel/uno#UncertaintyRelevantToTheIndependenceAcrossResearchNetwork">
<rdfs:subClassOf rdf:resource="http://purl.bioontology.org/net/brunel/uno#Uncertainty"/>
<hasSynonym>independence uncertainty</hasSynonym>
<rdfs:label xml:lang="en">uncertainty relevant to the independence across research network</rdfs:label>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IAO_0000030 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000030"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Annotations
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<rdf:Description rdf:about="http://purl.bioontology.org/net/brunel/uno#hasGroundingProbabilityUncertainty">
<rdfs:comment>associates a level of confidence in the correctness of the grounding of entities mentioned in the statement with that statement</rdfs:comment>
</rdf:Description>
</rdf:RDF>
<!-- Generated by the OWL API (version 4.2.6.20160910-2108) https://github.com/owlcs/owlapi -->