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DESCRIPTION
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DESCRIPTION
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Package: decal
Title: Differential Expression Analysis of Clonal Alterations Local effects
Version: 0.1.1
Authors@R:
person(given = "Andre", family = "Ribeiro-dos-Santos",
role = c("aut", "cre"),
email = "andremrsantos@gmail.com",
comment = c(ORCID = "https://orcid.org/0000-0002-7005-3576"))
Description: It models gene UMI counts from a single-cell experiment as a
negative binomial regression to measure the effect of a localized genetic
alteration of a clonal cell subpopulation to near by genes expression.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
Suggests:
testthat (>= 3.0.0),
knitr,
rmarkdown,
markdown,
bookdown
Config/testthat/edition: 3
Imports:
MASS,
fastglm,
methods,
Matrix
Depends:
R (>= 2.10)
VignetteBuilder: knitr
URL: https://mauranolab.github.io/decal