From 74a7901eecdc7e1b9b0b17949935dce2fa00b933 Mon Sep 17 00:00:00 2001 From: Wouter-Michiel Vierdag Date: Mon, 6 May 2024 15:53:36 +0200 Subject: [PATCH] change print to notification --- src/cell_gater/utils/csv_df.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/cell_gater/utils/csv_df.py b/src/cell_gater/utils/csv_df.py index 9feb75e..7549b9f 100644 --- a/src/cell_gater/utils/csv_df.py +++ b/src/cell_gater/utils/csv_df.py @@ -27,13 +27,13 @@ def stack_csv_files(csv_dir: Path) -> pd.DataFrame | None: napari_notification(f"Loaded {len(csv_files)} regionprops csvs.") df = pd.DataFrame() for file in csv_files: - if not file.name.startswith('.'): + if not file.name.startswith("."): df_file = pd.read_csv(file) df_file["sample_id"] = file.stem df = pd.concat([df, df_file], ignore_index=True) df["sample_id"] = df.sample_id.astype("category") else: - print(f"Skipping file {file.name} as it is a hidden file.") + napari_notification(f"Skipping file {file.name} as it is a hidden file.") return df