diff --git a/scripts/run_param_config.py b/scripts/run_param_config.py index a8f4654..7fa0307 100644 --- a/scripts/run_param_config.py +++ b/scripts/run_param_config.py @@ -97,7 +97,7 @@ def get_ordered_dic(unordered_dic): "RDM": "hg19", "myTYPE_V1": "hg19", "PanCancerV2": "hg19", - "MissionBio-Heme": "hg19", + "MissionBio-Heme": "GRCh38", "WholeExome_v4": "hg19", "AmpliSeq": "hg19", "HemeBrainPACT_v1": "hg19" @@ -575,8 +575,8 @@ def get_ordered_dic(unordered_dic): MD: "yes" }, "MissionBio-Heme": { - BAITS: "/igo/home/igo/resources/ilist/MissionBio-Heme/AML_BAITS.iList", - TARGETS: "/igo/home/igo/resources/ilist/MissionBio-Heme/AML_BAITS.iList", + BAITS: "/igo/work/nabors/bed_files/Mission_Bio/hg38/MissionBio-Heme_BAITS.iList", + TARGETS: "/igo/work/nabors/bed_files/Mission_Bio/hg38/MissionBio-Heme_TARGETS.iList", MSKQ: "no", MD: "yes" },