From 9341c6c63a3a4ba5bb4476f4678143b84b56e4be Mon Sep 17 00:00:00 2001 From: luc Date: Mon, 15 Apr 2024 15:38:13 -0400 Subject: [PATCH] add correct fastq list step after create folder --- scripts/organise_fastq_split_by_lane.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/organise_fastq_split_by_lane.py b/scripts/organise_fastq_split_by_lane.py index f0d81a7..bb7c108 100644 --- a/scripts/organise_fastq_split_by_lane.py +++ b/scripts/organise_fastq_split_by_lane.py @@ -92,7 +92,7 @@ def correct_fastq_list_csv(demux_reports_dir): demux_dir = sys.argv[2] if demux_type == "create": create_fastq_folders(demux_dir) - # add correct fastq list step? + correct_fastq_list_csv(demux_dir+"/Reports") elif demux_type == "correct": correct_sample_folder_name(demux_dir) else: