diff --git a/modules/nf-core/pbsv/call/main.nf b/modules/nf-core/pbsv/call/main.nf index 8076c3f5de3..928557240fe 100644 --- a/modules/nf-core/pbsv/call/main.nf +++ b/modules/nf-core/pbsv/call/main.nf @@ -22,7 +22,13 @@ process PBSV_CALL { def args = task.ext.args ?: '' def prefix = task.ext.prefix ?: "${meta.id}" """ - pbsv call -j ${task.cpus} ${fasta} ${svsig} ${prefix}.vcf $args + pbsv \\ + call \\ + $args \\ + -j ${task.cpus} \\ + ${fasta} \\ + ${svsig} \\ + ${prefix}.vcf cat <<-END_VERSIONS > versions.yml "${task.process}":