From 0df4a5af05f70066d45d23520b754f2b8f3491d5 Mon Sep 17 00:00:00 2001 From: Edmund Miller Date: Mon, 14 Oct 2024 09:15:38 -0500 Subject: [PATCH] Revert "chore: nf-core modules update multiqc" This reverts commit 15b5f19b6df3c314fb33b323858f83311e87694f. --- modules.json | 2 +- modules/nf-core/multiqc/environment.yml | 2 +- modules/nf-core/multiqc/main.nf | 6 ++--- .../nf-core/multiqc/tests/main.nf.test.snap | 26 +++++++++---------- 4 files changed, 18 insertions(+), 18 deletions(-) diff --git a/modules.json b/modules.json index db77dd0c..1a3c6102 100644 --- a/modules.json +++ b/modules.json @@ -143,7 +143,7 @@ }, "multiqc": { "branch": "master", - "git_sha": "cf17ca47590cc578dfb47db1c2a44ef86f89976d", + "git_sha": "b80f5fd12ff7c43938f424dd76392a2704fa2396", "installed_by": ["modules"] }, "pints/caller": { diff --git a/modules/nf-core/multiqc/environment.yml b/modules/nf-core/multiqc/environment.yml index 3096ee3f..2121492d 100644 --- a/modules/nf-core/multiqc/environment.yml +++ b/modules/nf-core/multiqc/environment.yml @@ -4,4 +4,4 @@ channels: - bioconda - defaults dependencies: - - bioconda::multiqc=1.25.1 + - bioconda::multiqc=1.23 diff --git a/modules/nf-core/multiqc/main.nf b/modules/nf-core/multiqc/main.nf index d4a48307..459dfea5 100644 --- a/modules/nf-core/multiqc/main.nf +++ b/modules/nf-core/multiqc/main.nf @@ -3,8 +3,8 @@ process MULTIQC { conda "${moduleDir}/environment.yml" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - 'https://depot.galaxyproject.org/singularity/multiqc:1.25.1--pyhdfd78af_0' : - 'biocontainers/multiqc:1.25.1--pyhdfd78af_0' }" + 'https://depot.galaxyproject.org/singularity/multiqc:1.23--pyhdfd78af_0' : + 'biocontainers/multiqc:1.23--pyhdfd78af_0' }" input: path multiqc_files, stageAs: "?/*" @@ -50,7 +50,7 @@ process MULTIQC { stub: """ mkdir multiqc_data - mkdir multiqc_plots + touch multiqc_plots touch multiqc_report.html cat <<-END_VERSIONS > versions.yml diff --git a/modules/nf-core/multiqc/tests/main.nf.test.snap b/modules/nf-core/multiqc/tests/main.nf.test.snap index 261dc0fa..45e95e5d 100644 --- a/modules/nf-core/multiqc/tests/main.nf.test.snap +++ b/modules/nf-core/multiqc/tests/main.nf.test.snap @@ -2,14 +2,14 @@ "multiqc_versions_single": { "content": [ [ - "versions.yml:md5,41f391dcedce7f93ca188f3a3ffa0916" + "versions.yml:md5,87904cd321df21fac35d18f0fc01bb19" ] ], "meta": { - "nf-test": "0.9.0", - "nextflow": "24.04.4" + "nf-test": "0.8.4", + "nextflow": "24.04.2" }, - "timestamp": "2024-10-02T17:51:46.317523" + "timestamp": "2024-07-10T12:41:34.562023" }, "multiqc_stub": { "content": [ @@ -17,25 +17,25 @@ "multiqc_report.html", "multiqc_data", "multiqc_plots", - "versions.yml:md5,41f391dcedce7f93ca188f3a3ffa0916" + "versions.yml:md5,87904cd321df21fac35d18f0fc01bb19" ] ], "meta": { - "nf-test": "0.9.0", - "nextflow": "24.04.4" + "nf-test": "0.8.4", + "nextflow": "24.04.2" }, - "timestamp": "2024-10-02T17:52:20.680978" + "timestamp": "2024-07-10T11:27:11.933869532" }, "multiqc_versions_config": { "content": [ [ - "versions.yml:md5,41f391dcedce7f93ca188f3a3ffa0916" + "versions.yml:md5,87904cd321df21fac35d18f0fc01bb19" ] ], "meta": { - "nf-test": "0.9.0", - "nextflow": "24.04.4" + "nf-test": "0.8.4", + "nextflow": "24.04.2" }, - "timestamp": "2024-10-02T17:52:09.185842" + "timestamp": "2024-07-10T11:26:56.709849369" } -} +} \ No newline at end of file