From de1714ba1817130cd3d431aebce0d98e8c732549 Mon Sep 17 00:00:00 2001 From: Alexander Peltzer Date: Tue, 8 Oct 2024 08:30:37 +0200 Subject: [PATCH] Update subworkflows/local/mirna_quant.nf Co-authored-by: James A. Fellows Yates --- subworkflows/local/mirna_quant.nf | 5 +---- 1 file changed, 1 insertion(+), 4 deletions(-) diff --git a/subworkflows/local/mirna_quant.nf b/subworkflows/local/mirna_quant.nf index 1ab42539..51a9b9a3 100644 --- a/subworkflows/local/mirna_quant.nf +++ b/subworkflows/local/mirna_quant.nf @@ -101,10 +101,7 @@ workflow MIRNA_QUANT { .map{ gtf, species -> [ [id:species.toString()], gtf, species ] } .collect() - BAM_STATS_MIRNA_MIRTOP( - BOWTIE_MAP_SEQCLUSTER.out.bam, - FORMAT_HAIRPIN.out.formatted_fasta, - ch_mirna_gtf_species ) + BAM_STATS_MIRNA_MIRTOP(BOWTIE_MAP_SEQCLUSTER.out.bam, FORMAT_HAIRPIN.out.formatted_fasta, ch_mirna_gtf_species ) ch_mirtop_logs = BAM_STATS_MIRNA_MIRTOP.out.stats_log ch_versions = ch_versions.mix(BAM_STATS_MIRNA_MIRTOP.out.versions)