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CAT - Contig Annotation Tool custom database #1102

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maxibor opened this issue Feb 16, 2024 · 1 comment

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maxibor commented Feb 16, 2024

As CAT database is quite large, a custom one would be needed to test nf pipelines/wf.

This is apparently feasible to generate a small enought database for CI purposes MGXlab/CAT_pack#65, and would already be needed for nf-core/mag#501

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maxibor commented Feb 16, 2024

For future reference: here is a very small db using pdb accession

cat_custom_db.tar.gz

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