From 952ae662321b8085e24ed87bead870a1980dce27 Mon Sep 17 00:00:00 2001
From: Phil Ewels <phil.ewels@seqera.io>
Date: Tue, 30 Apr 2024 15:22:44 +0200
Subject: [PATCH] Template: Add config profile 'wave'

---
 nf_core/pipeline-template/docs/usage.md   | 2 ++
 nf_core/pipeline-template/nextflow.config | 5 +++++
 2 files changed, 7 insertions(+)

diff --git a/nf_core/pipeline-template/docs/usage.md b/nf_core/pipeline-template/docs/usage.md
index c908d3d38c..b8305bf67f 100644
--- a/nf_core/pipeline-template/docs/usage.md
+++ b/nf_core/pipeline-template/docs/usage.md
@@ -163,6 +163,8 @@ If `-profile` is not specified, the pipeline will run locally and expect all sof
   - A generic configuration profile to be used with [Charliecloud](https://hpc.github.io/charliecloud/)
 - `apptainer`
   - A generic configuration profile to be used with [Apptainer](https://apptainer.org/)
+- `wave`
+  - A generic configuration profile to enable [Wave](https://seqera.io/wave/) containers. Use together with one of the above.
 - `conda`
   - A generic configuration profile to be used with [Conda](https://conda.io/docs/). Please only use Conda as a last resort i.e. when it's not possible to run the pipeline with Docker, Singularity, Podman, Shifter, Charliecloud, or Apptainer.
 
diff --git a/nf_core/pipeline-template/nextflow.config b/nf_core/pipeline-template/nextflow.config
index 2f9b349916..ad22abb5ae 100644
--- a/nf_core/pipeline-template/nextflow.config
+++ b/nf_core/pipeline-template/nextflow.config
@@ -176,6 +176,11 @@ profiles {
         executor.cpus          = 4
         executor.memory        = 8.GB
     }
+    wave {
+        wave.enabled = true
+        wave.strategy = 'conda,container'
+        wave.freeze = true
+    }
     test      { includeConfig 'conf/test.config'      }
     test_full { includeConfig 'conf/test_full.config' }
 }