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thesis.tex
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thesis.tex
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% Options for packages loaded elsewhere
\PassOptionsToPackage{unicode}{hyperref}
\PassOptionsToPackage{hyphens}{url}
%
\documentclass[
]{scrbook}
\usepackage{amsmath,amssymb}
\usepackage{lmodern}
\usepackage{iftex}
\ifPDFTeX
\usepackage[T1]{fontenc}
\usepackage[utf8]{inputenc}
\usepackage{textcomp} % provide euro and other symbols
\else % if luatex or xetex
\usepackage{unicode-math}
\defaultfontfeatures{Scale=MatchLowercase}
\defaultfontfeatures[\rmfamily]{Ligatures=TeX,Scale=1}
\fi
% Use upquote if available, for straight quotes in verbatim environments
\IfFileExists{upquote.sty}{\usepackage{upquote}}{}
\IfFileExists{microtype.sty}{% use microtype if available
\usepackage[]{microtype}
\UseMicrotypeSet[protrusion]{basicmath} % disable protrusion for tt fonts
}{}
\makeatletter
\@ifundefined{KOMAClassName}{% if non-KOMA class
\IfFileExists{parskip.sty}{%
\usepackage{parskip}
}{% else
\setlength{\parindent}{0pt}
\setlength{\parskip}{6pt plus 2pt minus 1pt}}
}{% if KOMA class
\KOMAoptions{parskip=half}}
\makeatother
\usepackage{xcolor}
\usepackage{color}
\usepackage{fancyvrb}
\newcommand{\VerbBar}{|}
\newcommand{\VERB}{\Verb[commandchars=\\\{\}]}
\DefineVerbatimEnvironment{Highlighting}{Verbatim}{commandchars=\\\{\}}
% Add ',fontsize=\small' for more characters per line
\newenvironment{Shaded}{}{}
\newcommand{\AlertTok}[1]{\textcolor[rgb]{1.00,0.00,0.00}{\textbf{#1}}}
\newcommand{\AnnotationTok}[1]{\textcolor[rgb]{0.38,0.63,0.69}{\textbf{\textit{#1}}}}
\newcommand{\AttributeTok}[1]{\textcolor[rgb]{0.49,0.56,0.16}{#1}}
\newcommand{\BaseNTok}[1]{\textcolor[rgb]{0.25,0.63,0.44}{#1}}
\newcommand{\BuiltInTok}[1]{\textcolor[rgb]{0.00,0.50,0.00}{#1}}
\newcommand{\CharTok}[1]{\textcolor[rgb]{0.25,0.44,0.63}{#1}}
\newcommand{\CommentTok}[1]{\textcolor[rgb]{0.38,0.63,0.69}{\textit{#1}}}
\newcommand{\CommentVarTok}[1]{\textcolor[rgb]{0.38,0.63,0.69}{\textbf{\textit{#1}}}}
\newcommand{\ConstantTok}[1]{\textcolor[rgb]{0.53,0.00,0.00}{#1}}
\newcommand{\ControlFlowTok}[1]{\textcolor[rgb]{0.00,0.44,0.13}{\textbf{#1}}}
\newcommand{\DataTypeTok}[1]{\textcolor[rgb]{0.56,0.13,0.00}{#1}}
\newcommand{\DecValTok}[1]{\textcolor[rgb]{0.25,0.63,0.44}{#1}}
\newcommand{\DocumentationTok}[1]{\textcolor[rgb]{0.73,0.13,0.13}{\textit{#1}}}
\newcommand{\ErrorTok}[1]{\textcolor[rgb]{1.00,0.00,0.00}{\textbf{#1}}}
\newcommand{\ExtensionTok}[1]{#1}
\newcommand{\FloatTok}[1]{\textcolor[rgb]{0.25,0.63,0.44}{#1}}
\newcommand{\FunctionTok}[1]{\textcolor[rgb]{0.02,0.16,0.49}{#1}}
\newcommand{\ImportTok}[1]{\textcolor[rgb]{0.00,0.50,0.00}{\textbf{#1}}}
\newcommand{\InformationTok}[1]{\textcolor[rgb]{0.38,0.63,0.69}{\textbf{\textit{#1}}}}
\newcommand{\KeywordTok}[1]{\textcolor[rgb]{0.00,0.44,0.13}{\textbf{#1}}}
\newcommand{\NormalTok}[1]{#1}
\newcommand{\OperatorTok}[1]{\textcolor[rgb]{0.40,0.40,0.40}{#1}}
\newcommand{\OtherTok}[1]{\textcolor[rgb]{0.00,0.44,0.13}{#1}}
\newcommand{\PreprocessorTok}[1]{\textcolor[rgb]{0.74,0.48,0.00}{#1}}
\newcommand{\RegionMarkerTok}[1]{#1}
\newcommand{\SpecialCharTok}[1]{\textcolor[rgb]{0.25,0.44,0.63}{#1}}
\newcommand{\SpecialStringTok}[1]{\textcolor[rgb]{0.73,0.40,0.53}{#1}}
\newcommand{\StringTok}[1]{\textcolor[rgb]{0.25,0.44,0.63}{#1}}
\newcommand{\VariableTok}[1]{\textcolor[rgb]{0.10,0.09,0.49}{#1}}
\newcommand{\VerbatimStringTok}[1]{\textcolor[rgb]{0.25,0.44,0.63}{#1}}
\newcommand{\WarningTok}[1]{\textcolor[rgb]{0.38,0.63,0.69}{\textbf{\textit{#1}}}}
\usepackage{longtable,booktabs,array}
\usepackage{calc} % for calculating minipage widths
% Correct order of tables after \paragraph or \subparagraph
\usepackage{etoolbox}
\makeatletter
\patchcmd\longtable{\par}{\if@noskipsec\mbox{}\fi\par}{}{}
\makeatother
% Allow footnotes in longtable head/foot
\IfFileExists{footnotehyper.sty}{\usepackage{footnotehyper}}{\usepackage{footnote}}
\makesavenoteenv{longtable}
\usepackage{graphicx}
\makeatletter
\def\maxwidth{\ifdim\Gin@nat@width>\linewidth\linewidth\else\Gin@nat@width\fi}
\def\maxheight{\ifdim\Gin@nat@height>\textheight\textheight\else\Gin@nat@height\fi}
\makeatother
% Scale images if necessary, so that they will not overflow the page
% margins by default, and it is still possible to overwrite the defaults
% using explicit options in \includegraphics[width, height, ...]{}
\setkeys{Gin}{width=\maxwidth,height=\maxheight,keepaspectratio}
% Set default figure placement to htbp
\makeatletter
\def\fps@figure{htbp}
\makeatother
\setlength{\emergencystretch}{3em} % prevent overfull lines
\providecommand{\tightlist}{%
\setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}}
\setcounter{secnumdepth}{-\maxdimen} % remove section numbering
\ifLuaTeX
\usepackage{selnolig} % disable illegal ligatures
\fi
\usepackage[style=numeric,]{biblatex}
\addbibresource{bibliography.bib}
\IfFileExists{bookmark.sty}{\usepackage{bookmark}}{\usepackage{hyperref}}
\usepackage{import}
\usepackage{tikz}
\makeatletter
\@ifpackageloaded{subfig}{}{\usepackage{subfig}}
\@ifpackageloaded{caption}{}{\usepackage{caption}}
\captionsetup[subfloat]{margin=0.5em}
\AtBeginDocument{%
\renewcommand*\figurename{Figure}
\renewcommand*\tablename{Table}
}
\AtBeginDocument{%
\renewcommand*\listfigurename{List of Figures}
\renewcommand*\listtablename{List of Tables}
}
\newcounter{pandoccrossref@subfigures@footnote@counter}
\newenvironment{pandoccrossrefsubfigures}{%
\setcounter{pandoccrossref@subfigures@footnote@counter}{0}
\begin{figure}\centering%
\gdef\global@pandoccrossref@subfigures@footnotes{}%
\DeclareRobustCommand{\footnote}[1]{\footnotemark%
\stepcounter{pandoccrossref@subfigures@footnote@counter}%
\ifx\global@pandoccrossref@subfigures@footnotes\empty%
\gdef\global@pandoccrossref@subfigures@footnotes{{##1}}%
\else%
\g@addto@macro\global@pandoccrossref@subfigures@footnotes{, {##1}}%
\fi}}%
{\end{figure}%
\addtocounter{footnote}{-\value{pandoccrossref@subfigures@footnote@counter}}
\@for\f:=\global@pandoccrossref@subfigures@footnotes\do{\stepcounter{footnote}\footnotetext{\f}}%
\gdef\global@pandoccrossref@subfigures@footnotes{}}
\@ifpackageloaded{float}{}{\usepackage{float}}
\floatstyle{ruled}
\@ifundefined{c@chapter}{\newfloat{codelisting}{h}{lop}}{\newfloat{codelisting}{h}{lop}[chapter]}
\floatname{codelisting}{Listing}
\newcommand*\listoflistings{\listof{codelisting}{List of Listings}}
\@ifpackageloaded{cleveref}{}{\usepackage{cleveref}}
\crefname{figure}{fig.}{figs.}
\Crefname{figure}{Fig.}{Figs.}
\crefname{table}{tbl.}{tbls.}
\Crefname{table}{Tbl.}{Tbls.}
\crefname{equation}{eq.}{eqns.}
\Crefname{equation}{Eq.}{Eqns.}
\crefname{listing}{lst.}{lsts.}
\Crefname{listing}{Lst.}{Lsts.}
\crefname{section}{sec.}{secs.}
\Crefname{section}{Sec.}{Secs.}
\crefname{codelisting}{\cref@listing@name}{\cref@listing@name@plural}
\Crefname{codelisting}{\Cref@listing@name}{\Cref@listing@name@plural}
\makeatother
\IfFileExists{xurl.sty}{\usepackage{xurl}}{} % add URL line breaks if available
\urlstyle{same} % disable monospaced font for URLs
\hypersetup{
pdftitle={Thesis Template},
pdfauthor={John Doe},
hidelinks,
pdfcreator={LaTeX via pandoc}}
\title{Thesis Template}
\usepackage{etoolbox}
\makeatletter
\providecommand{\subtitle}[1]{% add subtitle to \maketitle
\apptocmd{\@title}{\par {\large #1 \par}}{}{}
}
\makeatother
\subtitle{Over-Engineering as a Craft}
\author{John Doe}
\date{}
\begin{document}
\frontmatter
\maketitle
{
\setcounter{tocdepth}{2}
\tableofcontents
}
\mainmatter
\hypertarget{ch:introduction}{%
\chapter{Introduction}\label{ch:introduction}}
This is an overengineered thesis template.
It uses:
\begin{itemize}
\tightlist
\item
\href{https://nixos.org/}{Nix}
\item
\href{https://pandoc.org/}{Pandoc}
\item
\LaTeX
\item
\href{https://graphviz.org/}{dot}
\item
\href{https://inkscape.org}{Inkscape}
\item
\href{https://www.python.org/}{Python}
\end{itemize}
\begin{figure}
\hypertarget{fig:png}{%
\centering
\includegraphics{img/png/graph.png}
\caption{A graph from a PNG file}\label{fig:png}
}
\end{figure}
It can embed PNG images (see \cref{fig:png}), SVG images via Inkscape (see \cref{fig:svg}) or DOT graphs (see \cref{fig:dot}).
You can also cite references like~\autocite{moore_cramming_1965}, use inline math like \(\frac{1}{n}\) or display math:
\begin{align}
0 + 1 + 2 + 3 + 4 + \dotsb + n =
\sum_{k=0}^n k = \frac{n(n+1)}{2} = \frac{n^2+n}{2}
\end{align}
Just include it like seen in \cref{lst:display}.
\begin{codelisting}
\caption{Display math example}
\hypertarget{lst:display}{%
\label{lst:display}}%
\begin{Shaded}
\begin{Highlighting}[]
\KeywordTok{\textbackslash{}begin}\NormalTok{\{}\ExtensionTok{align}\NormalTok{\}}
\SpecialStringTok{ 0 + 1 + 2 + 3 + 4 + }\SpecialCharTok{\textbackslash{}dotsb}\SpecialStringTok{ + n =}
\SpecialStringTok{ }\SpecialCharTok{\textbackslash{}sum}\SpecialStringTok{\_\{k=0\}\^{}n k = }\SpecialCharTok{\textbackslash{}frac}\SpecialStringTok{\{n(n+1)\}\{2\} = }\SpecialCharTok{\textbackslash{}frac}\SpecialStringTok{\{n\^{}2+n\}\{2\}}
\KeywordTok{\textbackslash{}end}\NormalTok{\{}\ExtensionTok{align}\NormalTok{\}}
\end{Highlighting}
\end{Shaded}
\end{codelisting}
\begin{figure}[h]
\centering
\import{tmp/svg}{graph.pdf_tex}
\caption{A graph from an SVG file with embedded text}
\label{fig:svg}
\end{figure}
\begin{figure}[h]
\centering
\includegraphics{tmp/dot/graph}
\caption{A graph from a dot file}
\label{fig:dot}
\end{figure}
\Cref{fig:python} shows a graph generated by Python and \cref{fig:R} shows a graph generated with R using the same data.
\begin{figure}[h]
\centering
\includegraphics{tmp/python/graph}
\caption{A graph from Python}
\label{fig:python}
\end{figure}
\begin{figure}[h]
\centering
\include{tmp/R/graph.tex}
\caption{A graph from R}
\label{fig:R}
\end{figure}
\hypertarget{ch:other}{%
\chapter{Other Chapter}\label{ch:other}}
\backmatter
\printbibliography[title=Bibliography]
\end{document}