Dependency Dashboard #423

renovate · 2023-09-06T01:26:14Z

This issue lists Renovate updates and detected dependencies. Read the Dependency Dashboard docs to learn more.

Config Migration Needed

Select this checkbox to let Renovate create an automated Config Migration PR.

Rate-Limited

These updates are currently rate-limited. Click on a checkbox below to force their creation now.

Open

These updates have all been created already. Click a checkbox below to force a retry/rebase of any.

Ignored or Blocked

These are blocked by an existing closed PR and will not be recreated unless you click a checkbox below.

chore(deps): update cameronraysmith/maximize-build-space digest to fc881a6

Detected dependencies

bazel-module

MODULE.bazel

aspect_bazel_lib 2.7.9

rules_python 0.29.0

bazelisk

.bazelversion

bazel 7.2.1

devcontainer

.devcontainer/devcontainer.json

ghcr.io/devcontainers/features/docker-in-docker 2

docker-compose

containers/compose.yaml

dockerfile

.devcontainer/devcontainer.Dockerfile

containers/Dockerfile

docker/dockerfile 1

ghcr.io/iterative/cml 0-dvc3-base1-gpu

containers/Dockerfile.app

docker/dockerfile 1

condaforge/mambaforge 23.3.1-1

containers/Dockerfile.app.local

docker/dockerfile 1

condaforge/mambaforge 23.3.1-1

containers/Dockerfile.conda

condaforge/mambaforge 23.3.1-1

containers/Dockerfile.conda.cpu

docker/dockerfile 1

condaforge/mambaforge 23.3.1-1

containers/dyngen.Dockerfile

r-base 4.2.3

containers/gpu.Dockerfile

nvidia/cuda 12.3.0-runtime-ubuntu22.04

containers/nix.Dockerfile

ghcr.io/pinellolab/pyrovelocity 520-sum

containers/pkg.Dockerfile

python 3.10.13-slim

github-actions

.github/actions/build_nix_image/action.yml

docker/setup-qemu-action v3@5927c834f5b4fdf503fca6f4c7eccda82949e1ee

DeterminateSystems/nix-installer-action v12@7993355175c2765e5733dae74f3e0786fe0e5c4f

cachix/cachix-action v15@ad2ddac53f961de1989924296a1f236fcfbaa4fc

rlespinasse/github-slug-action v4@797d68864753cbceedc271349d402da4590e6302

.github/actions/setup_environment/action.yml

actions/setup-python v5@39cd14951b08e74b54015e9e001cdefcf80e669f

r-lib/actions v2

snok/install-poetry v1@93ada01c735cc8a383ce0ce2ae205a21c415379b

actions/cache v4@0c45773b623bea8c8e75f6c82b208c3cf94ea4f9

mxschmitt/action-tmate v3@a283f9441d2d96eb62436dc46d7014f5d357ac22

.github/workflows/app.yaml

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

docker/setup-qemu-action v2@2b82ce82d56a2a04d2637cd93a637ae1b359c0a7

docker/setup-buildx-action v2@885d1462b80bc1c1c7f0b00334ad271f09369c55

docker/login-action v3@0d4c9c5ea7693da7b068278f7b52bda2a190a446

docker/login-action v3@0d4c9c5ea7693da7b068278f7b52bda2a190a446

docker/metadata-action v5@8e5442c4ef9f78752691e2d8f8d19755c6f78e81

docker/build-push-action v5@ca052bb54ab0790a636c9b5f226502c73d547a25

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

google-github-actions/auth v2@71fee32a0bb7e97b4d33d548e7d957010649d8fa

google-github-actions/deploy-cloudrun v1@e62f655d5754bec48078a72edc015367b01ee97b

.github/workflows/build-images.yaml

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

rlespinasse/github-slug-action v4@797d68864753cbceedc271349d402da4590e6302

mxschmitt/action-tmate v3@a283f9441d2d96eb62436dc46d7014f5d357ac22

.github/workflows/build-nix-images.yaml

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

mxschmitt/action-tmate v3@a283f9441d2d96eb62436dc46d7014f5d357ac22

.github/workflows/cid.yaml

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

mikefarah/yq ef6fb92e7f314e7f0ef49da4385458271203119a

actions/upload-artifact v4@0b2256b8c012f0828dc542b3febcab082c67f72b

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

actions/download-artifact v4@fa0a91b85d4f404e444e00e005971372dc801d16

mxschmitt/action-tmate v3@a283f9441d2d96eb62436dc46d7014f5d357ac22

codecov/codecov-action v4@e28ff129e5465c2c0dcc6f003fc735cb6ae0c673

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

actions/cache v4@0c45773b623bea8c8e75f6c82b208c3cf94ea4f9

actions/cache v4@0c45773b623bea8c8e75f6c82b208c3cf94ea4f9

actions/upload-artifact v4@0b2256b8c012f0828dc542b3febcab082c67f72b

cameronraysmith/maximize-build-space fdf0c06b18d92be98aa64cb68ae4ea4c9bc4794d

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

DeterminateSystems/nix-installer-action v12@7993355175c2765e5733dae74f3e0786fe0e5c4f

cachix/cachix-action v15@ad2ddac53f961de1989924296a1f236fcfbaa4fc

rlespinasse/github-slug-action v4@797d68864753cbceedc271349d402da4590e6302

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

actions/download-artifact v4@fa0a91b85d4f404e444e00e005971372dc801d16

mxschmitt/action-tmate v3@a283f9441d2d96eb62436dc46d7014f5d357ac22

actions/upload-artifact v4@0b2256b8c012f0828dc542b3febcab082c67f72b

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

DeterminateSystems/nix-installer-action v12@7993355175c2765e5733dae74f3e0786fe0e5c4f

cachix/cachix-action v15@ad2ddac53f961de1989924296a1f236fcfbaa4fc

cihelper/action-semanticrelease-poetry v1@66900ba780321bcdb974891ee82f945a25a870d7

actions/upload-artifact v4@0b2256b8c012f0828dc542b3febcab082c67f72b

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

DeterminateSystems/nix-installer-action v12@7993355175c2765e5733dae74f3e0786fe0e5c4f

DeterminateSystems/flakehub-push d3b4b64eb6ff61361ac7a7ac146eb443c86921a2

actions/download-artifact v4@fa0a91b85d4f404e444e00e005971372dc801d16

pypa/gh-action-pypi-publish fb9fc6a4e67ca27a7a76b17bbf90be83c2d3c716

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

actions/upload-pages-artifact v3@56afc609e74202658d3ffba0e8f6dda462b719fa

actions/deploy-pages v4@d6db90164ac5ed86f2b6aed7e0febac5b3c0c03e

.github/workflows/cml-images.yml

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

docker/setup-qemu-action v2@2b82ce82d56a2a04d2637cd93a637ae1b359c0a7

docker/setup-buildx-action v2@885d1462b80bc1c1c7f0b00334ad271f09369c55

docker/login-action v3@0d4c9c5ea7693da7b068278f7b52bda2a190a446

docker/metadata-action v5@8e5442c4ef9f78752691e2d8f8d19755c6f78e81

docker/build-push-action v5@ca052bb54ab0790a636c9b5f226502c73d547a25

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

docker/setup-qemu-action v2@2b82ce82d56a2a04d2637cd93a637ae1b359c0a7

docker/setup-buildx-action v2@885d1462b80bc1c1c7f0b00334ad271f09369c55

docker/login-action v3@0d4c9c5ea7693da7b068278f7b52bda2a190a446

docker/login-action v3@0d4c9c5ea7693da7b068278f7b52bda2a190a446

docker/metadata-action v5@8e5442c4ef9f78752691e2d8f8d19755c6f78e81

docker/build-push-action v5@ca052bb54ab0790a636c9b5f226502c73d547a25

.github/workflows/cml.yml

actions/checkout v4

iterative/setup-cml v1

mxschmitt/action-tmate v3

actions/checkout v4

actions/setup-python v4

snok/install-poetry v1

actions/cache v3

mxschmitt/action-tmate v3

mxschmitt/action-tmate v3

.github/workflows/colab.yml

cameronraysmith/maximize-build-space fdf0c06b18d92be98aa64cb68ae4ea4c9bc4794d

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

mxschmitt/action-tmate v3@a283f9441d2d96eb62436dc46d7014f5d357ac22

google-github-actions/auth v2@71fee32a0bb7e97b4d33d548e7d957010649d8fa

google-github-actions/upload-cloud-storage v2@22121cd842b0d185e042e28d969925b538c33d77

.github/workflows/conda.yaml

cameronraysmith/maximize-build-space fdf0c06b18d92be98aa64cb68ae4ea4c9bc4794d

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

mxschmitt/action-tmate v3@a283f9441d2d96eb62436dc46d7014f5d357ac22

prefix-dev/rattler-build-action v0@0056f4275580a8f9194ea4dad19fc8abfdd08805

.github/workflows/labeler.yml

actions/checkout v4@692973e3d937129bcbf40652eb9f2f61becf3332

crazy-max/ghaction-github-labeler v5.0.0@de749cf181958193cb7debf1a9c5bb28922f3e1b

.github/workflows/pr-check.yaml

sequoia-pgp/fast-forward 042cd23fbf9d5ed1400497a106c8abe4b45408ab

.github/workflows/pr-merge.yaml

sequoia-pgp/fast-forward 042cd23fbf9d5ed1400497a106c8abe4b45408ab

pep621

pyproject.toml

poetry-core >=1.6.0

pip_requirements

docs/requirements.txt

reproducibility/figures/fig3/requirements.txt

reproducibility/figures/suppfig2/requirements.txt

requirements-cpu.txt

requirements-main.txt

poetry

pyproject.toml

python >=3.11, <3.13

adjusttext >=1.1.1

altair >=5.3.0

anndata >=0.10.5

anyio >=4.3.0

appdirs >=1.4.4

arviz >=0.17.1

astropy >=6.1.2

beartype >=0.18.5

chex >=0.1.7

click >=8.1.7

colorlog >=6.7.0

daft >=0.1.2

diffrax >=0.5.0

diskcache >=5.6.1

duckdb >=1.0.0

einops >=0.7.0

expression >=5.0.2

flax >=0.8.1

frozenlist >=1.1.1

fsspec >=2024.3.0

greenlet >=3.0.3

httpx >=0.27.0

h5py >=3.9.0

ibis-framework >=9.2.0

jax >=0.4.23

jaxlib >=0.4.23

jaxtyping >=0.2.25

leidenalg >=0.9.1

llvmlite >=0.41.1

matplotlib >=3.9.1

mlflow >=2.13.0

numpyro >=0.15.0

pandas >=2.0.0

plumbum >=1.8.2

polars >=0.20.17

pyarrow >=14.0.2

pydantic >=2.8.0

pyro-ppl >=1.9.1

lightning >=2.0.0

pytorch-lightning >=2.0.0

pyyaml >=6.0.1

returns >=0.23.0

rich >=13.7.1

scanpy >=1.10.1

scikit-learn >=1.3.1

scipy >=1.10.1,<1.14.0

scvelo >=0.3.2

scvi-tools >=1.1.1

seaborn >=0.13.2

sparse >=0.15.4

statsmodels >=0.14.2

sympy >=1.12

termcolor >=2.2.0

tiledb >=0.31.1

torch >=2.1.2

torchmetrics >=1.2.1

trio >=0.26.0

validators >=0.33.0

vegafusion >=1.6.9

vegafusion-python-embed >=1.6.9

vl-convert-python >=1.6.0

zstandard >=0.23.0

black >=23.3.0

coverage >=6.2

dataclasses-json >=0.5.7

dulwich >=0.21.7

flytekit >=1.13.3

furo >=2023.5.20

google-api-python-client >=2.79.0

hydra-core >=1.3.2

hydra-zen >=0.12.1

hypothesis >=6.71.0

ipython >=8.11.0

ipywidgets >=8.0.0

jupyter-cache >=0.6.1

jupyterlab >=4.0.9

jupytext >=1.16.0

mashumaro >=3.10

matplotlib-venn >=0.11.9

mypy >=0.930

myst-parser >=2.0.0

nbconvert >=7.14.0

nbformat >=5.9.2

nbsphinx >=0.9.3

omegaconf >=2.3.0

papermill >=2.4.0

pre-commit >=2.16.0

pre-commit-hooks >=4.1.0

pyensembl >=2.3.12

pyfaidx >=0.8.1.1

pygments >=2.15.0

pytest >=6.2.5

pytest-asyncio >=0.21.1

pytest-cov >=4.0.0

pytest-mock >=3.10.0

python-dotenv >=1.0.0

rich-click >=1.7.3

ruff >=0.1.5

sphinx >=7.0.1

sphinx-autobuild >=2021.3.14

sphinx-autodoc-typehints >=1.23.3

sphinx-click >=4.4.0

sphinx-copybutton >=0.5.2

sphinx-markdown-builder >=0.6.6

quartodoc >=0.7.2

xdoctest >=0.15.10

black >=23.3.0

mypy >=1.5.1

pre-commit >=2.16.0

pre-commit-hooks >=4.1.0

pyright >=1.1.347

ruff >=0.1.5

docformatter >=1.7.5

coverage >=6.2

hypothesis >=6.72.1

ipython >=8.11.0

pygments >=2.15.0

pytest >=7.3.1

pytest-asyncio >=0.21.1

pytest-cov >=4.0.0

pytest-mock >=3.10.0

requests-mock >=1.11.0

xdoctest >=1.1.1

furo >=2023.5.20

jupyter-cache >=0.6.1

jupyterlab >=4.0.9

jupytext >=1.16.0

myst-parser >=2.0.0

nbsphinx >=0.9.3

sphinx-autobuild >=2021.3.14

sphinx-autodoc-typehints >=1.23.3

sphinx-click >=4.4.0

sphinx-copybutton >=0.5.2

sphinx-markdown-builder >=0.6.6

sphinx >=7.0.1

quartodoc >=0.7.2

dataclasses-json >=0.5.7

dulwich >=0.21.7

flytekit >=1.13.0

google-api-python-client >=2.79.0

google-cloud-storage >=2.14.0

hydra-core >=1.3.2

hydra-zen >=0.12.1

ipywidgets >=8.0.0

jupytext >=1.16.0

mashumaro >=3.10

nbconvert >=7.14.0

nbformat >=5.9.2

omegaconf >=2.3.0

papermill >=2.4.0

pyperclip >=1.8.2

python-dotenv >=1.0.0

rich-click >=1.7.3

pyensembl >=2.3.12

pyfaidx >=0.8.1.1

terraform

reproducibility/environment/main.tf

google 4.41.0

Check this box to trigger a request for Renovate to run again on this repository

The text was updated successfully, but these errors were encountered:

cameronraysmith pinned this issue Sep 18, 2023

cameronraysmith added the dependencies Pull requests that update a dependency file label Aug 22, 2024

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

Dependency Dashboard #423

Dependency Dashboard #423

renovate bot commented Sep 6, 2023 •

edited

Loading

Dependency Dashboard #423

Dependency Dashboard #423

Comments

renovate bot commented Sep 6, 2023 • edited Loading

Config Migration Needed

Rate-Limited

Open

Ignored or Blocked

Detected dependencies

renovate bot commented Sep 6, 2023 •

edited

Loading