diff --git a/str/trtools/merge_str_runner.py b/str/trtools/merge_str_runner.py index dc197b62..13af2528 100644 --- a/str/trtools/merge_str_runner.py +++ b/str/trtools/merge_str_runner.py @@ -44,9 +44,14 @@ def main( trtools_job.image(TRTOOLS_IMAGE) trtools_job.cpu(8) # mount using cloudfuse for reading input files - trtools_job.cloudfuse(f'cpg-{dataset}-main-analysis', '/vcffuse') - trtools_job.declare_resource_group(vcf_output={'vcf': '{root}.vcf','vcf.gz': '{root}.vcf.gz', 'vcf.gz.tbi': '{root}.vcf.gz.tbi'}) - + trtools_job.cloudfuse(f'cpg-{dataset}-test-analysis', '/vcffuse') + trtools_job.declare_resource_group( + vcf_output={ + 'vcf': '{root}.vcf', + 'vcf.gz': '{root}.vcf.gz', + 'vcf.gz.tbi': '{root}.vcf.gz.tbi', + } + ) # read in input file paths vcffuse_path = []