diff --git a/_modules/index.html b/_modules/index.html index 4e0dbff0..caad3804 100644 --- a/_modules/index.html +++ b/_modules/index.html @@ -130,7 +130,6 @@

All modules for which code is available

  • optimism.material.J2Plastic
  • optimism.material.LinearElastic
  • optimism.material.MaterialUniaxialSimulator
    • -
  • optimism.material.MultiBranchHyperViscoelastic
  • optimism.material.Neohookean
  • optimism.material.test.test_Gent
  • optimism.material.test.test_Hardening
    • @@ -138,7 +137,6 @@

    All modules for which code is available

  • optimism.material.test.test_J2Plastic
  • optimism.material.test.test_LinearElastic
  • optimism.material.test.test_MaterialUniaxialSimulator
    • -
  • optimism.material.test.test_MultiBranchHyperVisco
  • optimism.material.test.test_RateSensitivity
  • optimism.phasefield.MaterialPointSimulator
  • optimism.phasefield.PhaseField
    • diff --git a/_modules/optimism/FunctionSpace.html b/_modules/optimism/FunctionSpace.html index 945f3555..1ab1aeb1 100644 --- a/_modules/optimism/FunctionSpace.html +++ b/_modules/optimism/FunctionSpace.html @@ -73,19 +73,29 @@

    Source code for optimism.FunctionSpace

    -from collections import namedtuple
-import numpy as onp
-
+from jax.scipy.linalg import solve
+from jaxtyping import Array, Float
+from optimism import Interpolants
+from optimism import Mesh
+from optimism import QuadratureRule
+from typing import Tuple
+import equinox as eqx
 import jax
 import jax.numpy as np
-from jax.scipy.linalg import solve
+import numpy as onp
 
-from optimism import Interpolants
-from optimism import Mesh
+
+
    
+[docs]
+class EssentialBC(eqx.Module):
+    nodeSet: str
+    component: int
    
 
 
-FunctionSpace = namedtuple('FunctionSpace', ['shapes', 'vols', 'shapeGrads', 'mesh', 'quadratureRule', 'isAxisymmetric'])
-FunctionSpace.__doc__ = \
+
+
    
+[docs]
+class FunctionSpace(eqx.Module):
     """Data needed for calculus on functions in the discrete function space.
 
     In describing the shape of the attributes, ``ne`` is the number of
@@ -107,8 +117,13 @@ 
    Source code for optimism.FunctionSpace
             isAxisymmetric: boolean indicating if the function space data are
             axisymmetric.
     """
+    shapes: Float[Array, "ne nqpe nn"]
+    vols: Float[Array, "ne nqpe"]
+    shapeGrads: Float[Array, "ne nqpe nn nd"]
+    mesh: Mesh.Mesh
+    quadratureRule: QuadratureRule.QuadratureRule
+    isAxisymmetric: bool
    
 
-EssentialBC = namedtuple('EssentialBC', ['nodeSet', 'component'])
 
 
 
    
@@ -503,25 +518,42 @@ 
    Source code for optimism.FunctionSpace
     
 
    
 [docs]
-class DofManager:
+class DofManager(eqx.Module):
+    # TODO get type hints below correct
+    # TODO this one could be moved to jax types if we move towards
+    # TODO jit safe preconditioners/solvers
+    fieldShape: Tuple[int, int]
+    isBc: any
+    isUnknown: any
+    ids: any
+    unknownIndices: any
+    bcIndices: any
+    dofToUnknown: any
+    HessRowCoords: any
+    HessColCoords: any
+    hessian_bc_mask: any
+
     def __init__(self, functionSpace, dim, EssentialBCs):
         self.fieldShape = Mesh.num_nodes(functionSpace.mesh), dim
-        self.isBc = onp.full(self.fieldShape, False, dtype=bool)
+        isBc = onp.full(self.fieldShape, False, dtype=bool)
         for ebc in EssentialBCs:
-            self.isBc[functionSpace.mesh.nodeSets[ebc.nodeSet], ebc.component] = True
+            isBc[functionSpace.mesh.nodeSets[ebc.nodeSet], ebc.component] = True
+        self.isBc = isBc
         self.isUnknown = ~self.isBc
 
-        self.ids = np.arange(self.isBc.size).reshape(self.fieldShape)
+        self.ids = onp.arange(self.isBc.size).reshape(self.fieldShape)
 
         self.unknownIndices = self.ids[self.isUnknown]
         self.bcIndices = self.ids[self.isBc]
 
-        ones = np.ones(self.isBc.size, dtype=int) * -1
-        self.dofToUnknown = ones.at[self.unknownIndices].set(np.arange(self.unknownIndices.size)) 
+        ones = onp.ones(self.isBc.size, dtype=int) * -1
+        dofToUnknown = ones
+        dofToUnknown[self.unknownIndices] = onp.arange(self.unknownIndices.size)
+        self.dofToUnknown = dofToUnknown
 
         self.HessRowCoords, self.HessColCoords = self._make_hessian_coordinates(functionSpace.mesh.conns)
 
-        self.hessian_bc_mask = self._make_hessian_bc_mask(functionSpace.mesh.conns)
+        self.hessian_bc_mask = self._make_hessian_bc_mask(onp.array(functionSpace.mesh.conns))
 
 
 
    
@@ -593,7 +625,7 @@ 
    Source code for optimism.FunctionSpace
                 rowCoords[rangeBegin:rangeEnd] = elHessCoords.ravel()
             colCoords[rangeBegin:rangeEnd] = elHessCoords.T.ravel()
 
-            rangeBegin += np.square(nElUnknowns[e])
+            rangeBegin += onp.square(nElUnknowns[e])
         return rowCoords, colCoords
    
 
 
diff --git a/_modules/optimism/material/MultiBranchHyperViscoelastic.html b/_modules/optimism/material/MultiBranchHyperViscoelastic.html
deleted file mode 100644
index 8c9a7bf4..00000000
--- a/_modules/optimism/material/MultiBranchHyperViscoelastic.html
+++ /dev/null
@@ -1,278 +0,0 @@
-
-
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-
-
-  
-  
-  optimism.material.MultiBranchHyperViscoelastic — optimism 0.1.0 documentation
-      
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    • Module code
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    • optimism.material.MultiBranchHyperViscoelastic
      • 
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    • 
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      • 
-  
    
-  
    
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-          
    
-           
    
-             
-  
    Source code for optimism.material.MultiBranchHyperViscoelastic
    -import jax.numpy as np
-from jax.scipy import linalg
-from optimism import TensorMath
-from optimism.material.MaterialModel import MaterialModel
-
-import jax
-
-PROPS_K_eq    = 0
-PROPS_G_eq    = 1
-PROPS_G_neq_1 = 2
-PROPS_TAU_1   = 3
-PROPS_G_neq_2 = 4
-PROPS_TAU_2   = 5
-PROPS_G_neq_3 = 6
-PROPS_TAU_3   = 7
-
-NUM_PRONY_TERMS = 3
-
-VISCOUS_DISTORTION = slice(0, NUM_PRONY_TERMS * 9)
-
-
    
-[docs]
-def create_material_model_functions(properties):
-    
-    density = properties.get('density')
-    props = _make_properties(properties)
-
-    def energy_density(dispGrad, state, dt):
-        return _energy_density(dispGrad, state, dt, props)
-
-    def compute_initial_state(shape=(1,)):
-        state = np.array([])
-        for n in range(NUM_PRONY_TERMS):
-          state = np.hstack((state, np.identity(3).ravel()))
-        return state
-
-    def compute_state_new(dispGrad, state, dt):
-        state = _compute_state_new(dispGrad, state, dt, props)
-        return state
-
-    def compute_material_qoi(dispGrad, state, dt):
-        return _compute_dissipated_energy(dispGrad, state, dt, props)
-
-    return MaterialModel(compute_energy_density = energy_density,
-                         compute_initial_state = compute_initial_state,
-                         compute_state_new = compute_state_new,
-                         compute_material_qoi = compute_material_qoi,
-                         density = density)
    
-
-
-
    
-[docs]
-def _make_properties(properties):
-
-    print('Equilibrium properties')
-    print('  Bulk modulus    = %s' % properties['equilibrium bulk modulus'])
-    print('  Shear modulus   = %s' % properties['equilibrium shear modulus'])
-    print('Prony branch properties')
-    for n in range(NUM_PRONY_TERMS):
-      print(f'  Shear modulus {n + 1}   = %s' % properties[f'non equilibrium shear modulus {n + 1}'])
-      print(f'  Relaxation time {n + 1} = %s' % properties[f'relaxation time {n + 1}'])
-
-    props = np.array([
-        properties['equilibrium bulk modulus'],
-        properties['equilibrium shear modulus'],
-        properties['non equilibrium shear modulus 1'],
-        properties['relaxation time 1'],
-        properties['non equilibrium shear modulus 2'],
-        properties['relaxation time 2'],
-        properties['non equilibrium shear modulus 3'],
-        properties['relaxation time 3']
-    ])
-
-    return props
    
-
-
-
    
-[docs]
-def _energy_density(dispGrad, state, dt, props):
-    W_eq  = _eq_strain_energy(dispGrad, props)
-    W_neq = 0.0
-    Psi = 0.0
-    for n in range(NUM_PRONY_TERMS):
-      state_temp = state.at[9 * n:(n + 1) * 9].get()
-      Ee_trial = _compute_elastic_logarithmic_strain(dispGrad, state_temp)
-      delta_Ev = _compute_state_increment(Ee_trial, dt, props, PROPS_G_neq_1 + 2 * n)
-      Ee = Ee_trial - delta_Ev 
-      W_neq = W_neq + _neq_strain_energy(Ee, props, PROPS_G_neq_1 + 2 * n)
-    
-      Dv = delta_Ev / dt
-      Psi = Psi + _dissipation_potential(Dv, props, PROPS_G_neq_1 + 2 * n)
-
-    return W_eq + W_neq + dt * Psi
    
-
-
-
    
-[docs]
-def _eq_strain_energy(dispGrad, props):
-    K, G = props[PROPS_K_eq], props[PROPS_G_eq]
-    F = dispGrad + np.eye(3)
-    J = np.linalg.det(F)
-    J23 = np.power(J, -2.0 / 3.0)
-    I1Bar = J23 * np.tensordot(F,F)
-    Wvol = 0.5 * K * (0.5 * J**2 - 0.5 - np.log(J))
-    Wdev = 0.5 * G * (I1Bar - 3.0)
-    return Wdev + Wvol
    
-
-
-
    
-[docs]
-def _neq_strain_energy(elasticStrain, props, prop_id):
-    G_neq = props[prop_id]
-    return G_neq * TensorMath.norm_of_deviator_squared(elasticStrain)
    
-
-
-
    
-[docs]
-def _dissipation_potential(Dv, props, prop_id):
-    G_neq = props[prop_id]
-    tau   = props[prop_id + 1]
-    eta   = G_neq * tau
-
-    return eta * TensorMath.norm_of_deviator_squared(Dv)
    
-
-
-
    
-[docs]
-def _compute_dissipated_energy(dispGrad, state, dt, props):
-    Psi = 0.0
-    for n in range(NUM_PRONY_TERMS):
-      state_temp = state.at[9 * n:9 * (n + 1)].get()
-      Ee_trial = _compute_elastic_logarithmic_strain(dispGrad, state_temp)
-      delta_Ev = _compute_state_increment(Ee_trial, dt, props, PROPS_G_neq_1 + 2 * n)
-      Dv = delta_Ev / dt
-      Psi = Psi + dt * _dissipation_potential(Dv, props, PROPS_G_neq_1 + 2 * n)
-
-    return Psi
    
-
-
-
    
-[docs]
-def _compute_state_new(dispGrad, stateOld, dt, props):
-    state_new = np.array([])
-    for n in range(NUM_PRONY_TERMS):
-      state_temp = stateOld.at[9 * n:9 * (n + 1)].get()
-      Ee_trial = _compute_elastic_logarithmic_strain(dispGrad, state_temp)
-      delta_Ev = _compute_state_increment(Ee_trial, dt, props, PROPS_G_neq_1 + 2 * n)
-
-      Fv_old = state_temp.reshape((3, 3))
-      Fv_new = linalg.expm(delta_Ev)@Fv_old
-      state_new = np.hstack((state_new, Fv_new.ravel()))
-    return state_new
    
-
-
-
    
-[docs]
-def _compute_state_increment(elasticStrain, dt, props, prop_id):
-    tau   = props[prop_id + 1]
-    integration_factor = 1. / (1. + dt / tau)
-
-    Ee_dev = TensorMath.dev(elasticStrain)
-    return dt * integration_factor * Ee_dev / tau # dt * D
    
-
-
-
    
-[docs]
-def _compute_elastic_logarithmic_strain(dispGrad, stateOld):
-    F = dispGrad + np.identity(3)
-    Fv_old = stateOld.reshape((3, 3))
-
-    Fe_trial = F @ np.linalg.inv(Fv_old)
-    return TensorMath.log_sqrt_symm(Fe_trial.T @ Fe_trial)
    
-
-
    
-
-           
    
-          
    
-          
    
-
-  
    
-
-  
    
-    
    © Copyright 2024, Brandon Talamini, Mike Tupek.
    
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-  Built with Sphinx using a
-    theme
-    provided by Read the Docs.
-   
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-        
    
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-  
    
-   
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diff --git a/_modules/optimism/material/test/test_MultiBranchHyperVisco.html b/_modules/optimism/material/test/test_MultiBranchHyperVisco.html
deleted file mode 100644
index fed928bd..00000000
--- a/_modules/optimism/material/test/test_MultiBranchHyperVisco.html
+++ /dev/null
@@ -1,241 +0,0 @@
-
-
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-  
-  
-  optimism.material.test.test_MultiBranchHyperVisco — optimism 0.1.0 documentation
-      
-      
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-          
    
-           
    
-             
-  
    Source code for optimism.material.test.test_MultiBranchHyperVisco
    -import unittest
-
-import jax
-import jax.numpy as np
-from jax.scipy import linalg
-from matplotlib import pyplot as plt
-
-from optimism.material import MultiBranchHyperViscoelastic as HyperVisco
-from optimism.test.TestFixture import TestFixture
-from optimism.material import MaterialUniaxialSimulator
-from optimism.TensorMath import deviator
-from optimism.TensorMath import log_symm
-
-plotting = False
-
-
    
-[docs]
-class HyperViscoModelFixture(TestFixture):
-
    
-[docs]
-    def setUp(self):
-    
-        G_eq = 0.855 # MPa
-        K_eq = 1000*G_eq # MPa
-        G_neq_1 = 1.0
-        tau_1 = 1.0
-        G_neq_2 = 2.0
-        tau_2 = 10.0
-        G_neq_3 = 3.0
-        tau_3 = 100.0
-        # self.G_neq_1 = G_neq_1
-        # self.tau_1 = tau_1 
-        # self.eta_1 = G_neq_1 * tau_1
-
-        # self.G_neq_2 = G_neq_2
-        # self.tau_2 = tau_2
-        # self.eta_2 = G_neq_2 * tau_2
-
-        # self.G_neq_3 = G_neq_3
-        # self.tau_3 = tau_3 
-        # self.eta_3 = G_neq_3 * tau_3
-
-        self.G_neqs = np.array([G_neq_1, G_neq_2, G_neq_3])
-        self.taus = np.array([tau_1, tau_2, tau_3])
-        self.etas = self.G_neqs * self.taus
-
-        self.props = {
-            'equilibrium bulk modulus'       : K_eq,
-            'equilibrium shear modulus'      : G_eq,
-            'non equilibrium shear modulus 1': G_neq_1,
-            'relaxation time 1'              : tau_1,
-            'non equilibrium shear modulus 2': G_neq_2,
-            'relaxation time 2'              : tau_2,
-            'non equilibrium shear modulus 3': G_neq_3,
-            'relaxation time 3'              : tau_3,
-        } 
-
-        materialModel = HyperVisco.create_material_model_functions(self.props)
-        self.energy_density = jax.jit(materialModel.compute_energy_density)
-        self.compute_state_new = jax.jit(materialModel.compute_state_new)
-        self.compute_initial_state = materialModel.compute_initial_state
-        self.compute_material_qoi = jax.jit(materialModel.compute_material_qoi)
    
-
    
-
-
-
    
-[docs]
-class HyperViscoUniaxialStrain(HyperViscoModelFixture):
-
    
-[docs]
-    def test_loading_only(self):
-        strain_rate = 1.0e-2
-        total_time = 100.0
-        n_steps = 100
-        dt = total_time / n_steps
-        times = np.linspace(0.0, total_time, n_steps)
-        Fs = jax.vmap(
-            lambda t: np.array(
-                [[np.exp(strain_rate * t), 0.0, 0.0],
-                 [0.0, 1.0, 0.0],
-                 [0.0, 0.0, 1.0]]
-            )
-        )(times)
-        state_old = self.compute_initial_state()
-        energies = np.zeros(n_steps)
-        states = np.zeros((n_steps, state_old.shape[0]))
-        dissipated_energies = np.zeros(n_steps)
-
-        # numerical solution
-        for n, F in enumerate(Fs):
-            dispGrad = F - np.eye(3)
-            energies = energies.at[n].set(self.energy_density(dispGrad, state_old, dt))
-            state_new = self.compute_state_new(dispGrad, state_old, dt)
-            states = states.at[n, :].set(state_new)
-            dissipated_energies = dissipated_energies.at[n].set(self.compute_material_qoi(dispGrad, state_old, dt))
-            state_old = state_new
-
-        dissipated_energies_analytic = np.zeros(len(Fs))
-
-        for n in range(3):
-            Fvs = jax.vmap(lambda Fv: Fv.at[9 * n:9 * (n + 1)].get().reshape((3, 3)))(states)
-            Fes = jax.vmap(lambda F, Fv: F @ np.linalg.inv(Fv), in_axes=(0, 0))(Fs, Fvs)
-
-            Evs = jax.vmap(lambda Fv: log_symm(Fv))(Fvs)
-            Ees = jax.vmap(lambda Fe: log_symm(Fe))(Fes)
-
-            # analytic solution
-            e_v_11 = (2. / 3.) * strain_rate * times - \
-                     (2. / 3.) * strain_rate * self.taus[n] * (1. - np.exp(-times / self.taus[n]))
-
-            e_e_11 = strain_rate * times - e_v_11
-            e_e_22 = 0.5 * e_v_11
-
-            Ee_analytic = jax.vmap(
-                lambda e_11, e_22: np.array(
-                    [[e_11, 0., 0.],
-                    [0., e_22, 0.],
-                    [0., 0., e_22]]
-                ), in_axes=(0, 0)
-            )(e_e_11, e_e_22)
-
-            Me_analytic = jax.vmap(lambda Ee: 2. * self.G_neqs[n] * deviator(Ee))(Ee_analytic)
-            Dv_analytic = jax.vmap(lambda Me: 1. / (2. * self.etas[n]) * deviator(Me))(Me_analytic)
-            dissipated_energies_analytic += jax.vmap(lambda Dv: dt * self.etas[n] * np.tensordot(deviator(Dv), deviator(Dv)) )(Dv_analytic)
-
-            # test
-            self.assertArrayNear(Evs[:, 0, 0], e_v_11, 3)
-            self.assertArrayNear(Ees[:, 0, 0], e_e_11, 3)
-            self.assertArrayNear(Ees[:, 1, 1], e_e_22, 3)
-
-        self.assertArrayNear(dissipated_energies, dissipated_energies_analytic, 3)
    
-
    
-
-
-if __name__ == '__main__':
-    unittest.main()
-
    
-
-           
    
-          
    
-          
    
-
-  
    
-
-  
    
-    
    © Copyright 2024, Brandon Talamini, Mike Tupek.
    
-  
    
-
-  Built with Sphinx using a
-    theme
-    provided by Read the Docs.
-   
-
-
    
-        
    
-      
    
-    
    
-  
    
-   
-
-
-
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diff --git a/_sources/optimism.material.rst.txt b/_sources/optimism.material.rst.txt
index 02375847..556fe99a 100644
--- a/_sources/optimism.material.rst.txt
+++ b/_sources/optimism.material.rst.txt
@@ -75,15 +75,6 @@ optimism.material.MaterialUniaxialSimulator module
    :show-inheritance:
    :private-members:
 
-optimism.material.MultiBranchHyperViscoelastic module
------------------------------------------------------
-
-.. automodule:: optimism.material.MultiBranchHyperViscoelastic
-   :members:
-   :undoc-members:
-   :show-inheritance:
-   :private-members:
-
 optimism.material.Neohookean module
 -----------------------------------
 
diff --git a/_sources/optimism.material.test.rst.txt b/_sources/optimism.material.test.rst.txt
index 8733d58b..0f92d2a8 100644
--- a/_sources/optimism.material.test.rst.txt
+++ b/_sources/optimism.material.test.rst.txt
@@ -67,15 +67,6 @@ optimism.material.test.test\_MaterialUniaxialSimulator module
    :show-inheritance:
    :private-members:
 
-optimism.material.test.test\_MultiBranchHyperVisco module
----------------------------------------------------------
-
-.. automodule:: optimism.material.test.test_MultiBranchHyperVisco
-   :members:
-   :undoc-members:
-   :show-inheritance:
-   :private-members:
-
 optimism.material.test.test\_RateSensitivity module
 ---------------------------------------------------
 
diff --git a/genindex.html b/genindex.html
index 13d65dd9..47995f12 100644
--- a/genindex.html
+++ b/genindex.html
@@ -107,9 +107,15 @@ 
    Index
    
 
    _
    
 
-  
+  
+  
-  
    
   
   
   
       
  • HardeningModel (class in optimism.material.Hardening)
+
    • 
+      
  • HessColCoords (optimism.FunctionSpace.DofManager attribute)
 
    • 
       
  • hessian() (optimism.ConstrainedObjective.ConstrainedObjective method)
 
@@ -1845,30 +1801,26 @@ 
    H
    
         
  • (optimism.Objective.Objective method)
 
    • 
       
+      		
 
    
 
@@ -1876,6 +1828,8 @@ 
    I
    
 
-  
+  
-  
+  
+  
-  
-     
-       
-       
-     
-       
-       
    
   
       
  • isAxisymmetric (optimism.FunctionSpace.FunctionSpace attribute), [1]
+
    • 
+      
  • isBc (optimism.FunctionSpace.DofManager attribute)
+
    • 
+      
  • isUnknown (optimism.FunctionSpace.DofManager attribute)
 
    • 
       
  • iterations (optimism.ScalarRootFind.SolutionInfo attribute)
 
    • 
@@ -2318,8 +2276,6 @@ 
    M
    
         
  • optimism.material.MaterialModel
 
    • 
         
  • optimism.material.MaterialUniaxialSimulator
-
    • 
-        
  • optimism.material.MultiBranchHyperViscoelastic
 
    • 
         
  • optimism.material.Neohookean
 
    • 
@@ -2336,8 +2292,6 @@ 
    M
    
         
  • optimism.material.test.test_LinearElastic
 
    • 
         
  • optimism.material.test.test_MaterialUniaxialSimulator
-
    • 
-        
  • optimism.material.test.test_MultiBranchHyperVisco
 
    • 
         
  • optimism.material.test.test_RateSensitivity
 
    • 
@@ -2875,13 +2829,6 @@ 
    O
    
 
       
-      
  • 
-    optimism.material.MultiBranchHyperViscoelastic
-
-      
    • 
       
  • 
@@ -2938,13 +2885,6 @@ 
    O
    
 
       
    • 
-      
  • 
-    optimism.material.test.test_MultiBranchHyperVisco
-
-      
    • 
       
  • 
@@ -3010,8 +2950,6 @@ 
    O
    
         
  • module
 
    • 
       
-  
      
       
    • 
     optimism.phasefield.MaterialPointSimulator
 
@@ -3019,6 +2957,8 @@ 
      O
      
         
    • module
 
      • 
       
    
+      		
+      
  • unknownIndices (optimism.FunctionSpace.DofManager attribute)
+
    • 
       
  • unpack_fields_2D() (in module optimism.phasefield.PhaseField)
 
    • 
       
  • unpack_gradients_2D() (in module optimism.phasefield.PhaseField)
@@ -4745,14 +4681,14 @@ 
    U
    
         
  • (optimism.SparseCholesky.SparseCholesky method)
 
    • 
       
+      		   
        optimism.material.MaterialUniaxialSimulator
        
       
-       optimism.material.MultiBranchHyperViscoelastic
-       
    
      
    
        
           
@@ -336,11 +331,6 @@ 
    Python Module Index
    
            		   
        optimism.material.test.test_MaterialUniaxialSimulator
        
       
-       optimism.material.test.test_MultiBranchHyperVisco
-       
    
      
    
        
           
diff --git a/searchindex.js b/searchindex.js
index 447a69d4..aca80e7a 100644
--- a/searchindex.js
+++ b/searchindex.js
@@ -1 +1 @@
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module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField._compute_element_stiffnesses", false]], "_compute_element_stiffnesses_multi_block() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_element_stiffnesses_multi_block", false]], "_compute_initial_state_multi_block() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_initial_state_multi_block", false]], "_compute_kinetic_energy() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_kinetic_energy", false]], "_compute_newmark_element_hessians() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_newmark_element_hessians", false]], "_compute_state_increment() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._compute_state_increment", false]], "_compute_state_increment() (in module optimism.material.multibranchhyperviscoelastic)": [[5, "optimism.material.MultiBranchHyperViscoelastic._compute_state_increment", false]], "_compute_state_new() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._compute_state_new", false]], "_compute_state_new() (in module optimism.material.multibranchhyperviscoelastic)": [[5, "optimism.material.MultiBranchHyperViscoelastic._compute_state_new", false]], "_compute_state_new() (in module optimism.material.neohookean)": [[5, "optimism.material.Neohookean._compute_state_new", false]], "_compute_strain_energy() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_strain_energy", false]], "_compute_strain_energy_multi_block() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_strain_energy_multi_block", false]], "_compute_updated_internal_variables() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_updated_internal_variables", false]], "_compute_updated_internal_variables_multi_block() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_updated_internal_variables_multi_block", false]], "_dissipation_potential() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._dissipation_potential", false]], "_dissipation_potential() (in module optimism.material.multibranchhyperviscoelastic)": [[5, "optimism.material.MultiBranchHyperViscoelastic._dissipation_potential", false]], "_energy_density() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._energy_density", false]], "_energy_density() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic._energy_density", false]], "_energy_density() (in module optimism.material.multibranchhyperviscoelastic)": [[5, "optimism.material.MultiBranchHyperViscoelastic._energy_density", false]], "_eq_strain_energy() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._eq_strain_energy", false]], "_eq_strain_energy() (in module optimism.material.multibranchhyperviscoelastic)": [[5, "optimism.material.MultiBranchHyperViscoelastic._eq_strain_energy", false]], "_exp_relative_difference() (in module optimism.tensormath)": [[2, "optimism.TensorMath._exp_relative_difference", false]], "_exp_symm_jvp() (in module optimism.tensormath)": [[2, "optimism.TensorMath._exp_symm_jvp", false]], "_field_defaults (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings._field_defaults", false]], "_field_defaults (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings._field_defaults", false]], "_field_defaults (optimism.functionspace.essentialbc attribute)": [[2, "optimism.FunctionSpace.EssentialBC._field_defaults", false]], "_field_defaults (optimism.functionspace.functionspace attribute)": [[2, "optimism.FunctionSpace.FunctionSpace._field_defaults", false]], "_field_defaults (optimism.material.hardening.hardeningmodel attribute)": [[5, "optimism.material.Hardening.HardeningModel._field_defaults", false]], "_field_defaults (optimism.material.hardening.ratesensitivitymodel attribute)": [[5, "optimism.material.Hardening.RateSensitivityModel._field_defaults", false]], "_field_defaults (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel._field_defaults", false]], "_field_defaults (optimism.material.materialmodel.matprops attribute)": [[5, "optimism.material.MaterialModel.MatProps._field_defaults", false]], "_field_defaults (optimism.material.materialuniaxialsimulator.uniaxialoutput attribute)": [[5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput._field_defaults", false]], "_field_defaults (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions._field_defaults", false]], "_field_defaults (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions._field_defaults", false]], "_field_defaults (optimism.mechanics.newmarkparameters attribute)": [[2, "optimism.Mechanics.NewmarkParameters._field_defaults", false]], "_field_defaults (optimism.mesh.mesh attribute)": [[2, "optimism.Mesh.Mesh._field_defaults", false]], "_field_defaults (optimism.minimizescalar.settings attribute)": [[2, "optimism.MinimizeScalar.Settings._field_defaults", false]], "_field_defaults (optimism.newtonsolver.settings attribute)": [[2, "optimism.NewtonSolver.Settings._field_defaults", false]], "_field_defaults (optimism.objective.params attribute)": [[2, "optimism.Objective.Params._field_defaults", false]], "_field_defaults (optimism.phasefield.materialpointsimulator.uniaxialoutput attribute)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput._field_defaults", false]], "_field_defaults (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions._field_defaults", false]], "_field_defaults (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel._field_defaults", false]], "_field_defaults (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties._field_defaults", false]], "_field_defaults (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties._field_defaults", false]], "_field_defaults (optimism.scalarrootfind.settings attribute)": [[2, "optimism.ScalarRootFind.Settings._field_defaults", false]], "_field_defaults (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo._field_defaults", false]], "_field_defaults (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings._field_defaults", false]], "_field_defaults (optimism.vtkwriter.vtkwriter.vtkfieldrecord attribute)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord._field_defaults", false]], "_fields (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings._fields", false]], "_fields (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings._fields", false]], "_fields (optimism.functionspace.essentialbc attribute)": [[2, "optimism.FunctionSpace.EssentialBC._fields", false]], "_fields (optimism.functionspace.functionspace attribute)": [[2, "optimism.FunctionSpace.FunctionSpace._fields", false]], "_fields (optimism.material.hardening.hardeningmodel attribute)": [[5, "optimism.material.Hardening.HardeningModel._fields", false]], "_fields (optimism.material.hardening.ratesensitivitymodel attribute)": [[5, "optimism.material.Hardening.RateSensitivityModel._fields", false]], "_fields (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel._fields", false]], "_fields (optimism.material.materialmodel.matprops attribute)": [[5, "optimism.material.MaterialModel.MatProps._fields", false]], "_fields (optimism.material.materialuniaxialsimulator.uniaxialoutput attribute)": [[5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput._fields", false]], "_fields (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions._fields", false]], "_fields (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions._fields", false]], "_fields (optimism.mechanics.newmarkparameters attribute)": [[2, "optimism.Mechanics.NewmarkParameters._fields", false]], "_fields (optimism.mesh.mesh attribute)": [[2, "optimism.Mesh.Mesh._fields", false]], "_fields (optimism.minimizescalar.settings attribute)": [[2, "optimism.MinimizeScalar.Settings._fields", false]], "_fields (optimism.newtonsolver.settings attribute)": [[2, "optimism.NewtonSolver.Settings._fields", false]], "_fields (optimism.objective.params attribute)": [[2, "optimism.Objective.Params._fields", false]], "_fields (optimism.phasefield.materialpointsimulator.uniaxialoutput attribute)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput._fields", false]], "_fields (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions._fields", false]], "_fields (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel._fields", false]], "_fields (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties._fields", false]], "_fields (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties._fields", false]], "_fields (optimism.scalarrootfind.settings attribute)": [[2, "optimism.ScalarRootFind.Settings._fields", false]], "_fields (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo._fields", false]], "_fields (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings._fields", false]], "_fields (optimism.vtkwriter.vtkwriter.vtkfieldrecord attribute)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord._fields", false]], "_float_split() (in module optimism.math)": [[2, "optimism.Math._float_split", false]], "_gauss_quad_1d_1pt() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule._gauss_quad_1D_1pt", false]], "_gauss_quad_1d_2pt() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule._gauss_quad_1D_2pt", false]], "_gauss_quad_1d_3pt() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule._gauss_quad_1D_3pt", false]], "_gauss_quad_1d_4pt() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule._gauss_quad_1D_4pt", false]], "_gauss_quad_1d_5pt() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule._gauss_quad_1D_5pt", false]], "_gent_3d_energy_density() (in module optimism.material.gent)": [[5, "optimism.material.Gent._gent_3D_energy_density", false]], "_get_vertex_nodes_from_exodus_tri6_mesh() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._get_vertex_nodes_from_exodus_tri6_mesh", false]], "_linear_elastic_energy_density() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic._linear_elastic_energy_density", false]], "_log_relative_difference() (in module optimism.tensormath)": [[2, "optimism.TensorMath._log_relative_difference", false]], "_log_symm_jvp() (in module optimism.tensormath)": [[2, "optimism.TensorMath._log_symm_jvp", false]], "_logm_iss() (in module optimism.linalg)": [[2, "optimism.LinAlg._logm_iss", false]], "_make() (optimism.alsolver.settings class method)": [[2, "optimism.AlSolver.Settings._make", false]], "_make() (optimism.equationsolver.settings class method)": [[2, "optimism.EquationSolver.Settings._make", false]], "_make() (optimism.functionspace.essentialbc class method)": [[2, "optimism.FunctionSpace.EssentialBC._make", false]], "_make() (optimism.functionspace.functionspace class method)": [[2, "optimism.FunctionSpace.FunctionSpace._make", false]], "_make() (optimism.material.hardening.hardeningmodel class method)": [[5, "optimism.material.Hardening.HardeningModel._make", false]], "_make() (optimism.material.hardening.ratesensitivitymodel class method)": [[5, "optimism.material.Hardening.RateSensitivityModel._make", false]], "_make() (optimism.material.materialmodel.materialmodel class method)": [[5, "optimism.material.MaterialModel.MaterialModel._make", false]], "_make() (optimism.material.materialmodel.matprops class method)": [[5, "optimism.material.MaterialModel.MatProps._make", false]], "_make() (optimism.material.materialuniaxialsimulator.uniaxialoutput class method)": [[5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput._make", false]], "_make() (optimism.mechanics.dynamicsfunctions class method)": [[2, "optimism.Mechanics.DynamicsFunctions._make", false]], "_make() (optimism.mechanics.mechanicsfunctions class method)": [[2, "optimism.Mechanics.MechanicsFunctions._make", false]], "_make() (optimism.mechanics.newmarkparameters class method)": [[2, "optimism.Mechanics.NewmarkParameters._make", false]], "_make() (optimism.mesh.mesh class method)": [[2, "optimism.Mesh.Mesh._make", false]], "_make() (optimism.minimizescalar.settings class method)": [[2, "optimism.MinimizeScalar.Settings._make", false]], "_make() (optimism.newtonsolver.settings class method)": [[2, "optimism.NewtonSolver.Settings._make", false]], "_make() (optimism.objective.params class method)": [[2, "optimism.Objective.Params._make", false]], "_make() (optimism.phasefield.materialpointsimulator.uniaxialoutput class method)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput._make", false]], "_make() (optimism.phasefield.phasefield.phasefieldfunctions class method)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions._make", false]], "_make() (optimism.phasefield.phasefieldmaterialmodel.materialmodel class method)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel._make", false]], "_make() (optimism.phasefield.phasefieldthreshold.properties class method)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties._make", false]], "_make() (optimism.phasefield.phasefieldthresholdplastic.properties class method)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties._make", false]], "_make() (optimism.scalarrootfind.settings class method)": [[2, "optimism.ScalarRootFind.Settings._make", false]], "_make() (optimism.scalarrootfind.solutioninfo class method)": [[2, "optimism.ScalarRootFind.SolutionInfo._make", false]], "_make() (optimism.trustregionspg.settings class method)": [[2, "optimism.TrustRegionSPG.Settings._make", false]], "_make() (optimism.vtkwriter.vtkwriter.vtkfieldrecord class method)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord._make", false]], "_make_hessian_bc_mask() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager._make_hessian_bc_mask", false]], "_make_hessian_coordinates() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager._make_hessian_coordinates", false]], "_make_properties() (in module optimism.material.gent)": [[5, "optimism.material.Gent._make_properties", false]], "_make_properties() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._make_properties", false]], "_make_properties() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic._make_properties", false]], "_make_properties() (in module optimism.material.multibranchhyperviscoelastic)": [[5, "optimism.material.MultiBranchHyperViscoelastic._make_properties", false]], "_make_properties() (in module optimism.material.neohookean)": [[5, "optimism.material.Neohookean._make_properties", false]], "_neohookean_3d_energy_density() (in module optimism.material.neohookean)": [[5, "optimism.material.Neohookean._neohookean_3D_energy_density", false]], "_neq_strain_energy() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._neq_strain_energy", false]], "_neq_strain_energy() (in module optimism.material.multibranchhyperviscoelastic)": [[5, "optimism.material.MultiBranchHyperViscoelastic._neq_strain_energy", false]], "_pow_relative_difference() (in module optimism.tensormath)": [[2, "optimism.TensorMath._pow_relative_difference", false]], "_pow_symm_jvp() (in module optimism.tensormath)": [[2, "optimism.TensorMath._pow_symm_jvp", false]], "_read_block_conns() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_block_conns", false]], "_read_block_variable_values() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_block_variable_values", false]], "_read_blocks() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_blocks", false]], "_read_coordinates() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_coordinates", false]], "_read_element_type() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_element_type", false]], "_read_names_list() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_names_list", false]], "_read_node_sets() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_node_sets", false]], "_read_side_sets() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_side_sets", false]], "_relative_log_difference() (in module optimism.tensormath)": [[2, "optimism.TensorMath._relative_log_difference", false]], "_relative_log_difference_no_tolerance_check() (in module optimism.tensormath)": [[2, "optimism.TensorMath._relative_log_difference_no_tolerance_check", false]], "_relative_log_difference_taylor() (in module optimism.tensormath)": [[2, "optimism.TensorMath._relative_log_difference_taylor", false]], "_replace() (optimism.alsolver.settings method)": [[2, "optimism.AlSolver.Settings._replace", false]], "_replace() (optimism.equationsolver.settings method)": [[2, "optimism.EquationSolver.Settings._replace", false]], "_replace() (optimism.functionspace.essentialbc method)": [[2, "optimism.FunctionSpace.EssentialBC._replace", false]], "_replace() (optimism.functionspace.functionspace method)": [[2, "optimism.FunctionSpace.FunctionSpace._replace", false]], "_replace() (optimism.material.hardening.hardeningmodel method)": [[5, "optimism.material.Hardening.HardeningModel._replace", false]], "_replace() (optimism.material.hardening.ratesensitivitymodel method)": [[5, "optimism.material.Hardening.RateSensitivityModel._replace", false]], "_replace() (optimism.material.materialmodel.materialmodel method)": [[5, "optimism.material.MaterialModel.MaterialModel._replace", false]], "_replace() (optimism.material.materialmodel.matprops method)": [[5, "optimism.material.MaterialModel.MatProps._replace", false]], "_replace() (optimism.material.materialuniaxialsimulator.uniaxialoutput method)": [[5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput._replace", false]], "_replace() (optimism.mechanics.dynamicsfunctions method)": [[2, "optimism.Mechanics.DynamicsFunctions._replace", false]], "_replace() (optimism.mechanics.mechanicsfunctions method)": [[2, "optimism.Mechanics.MechanicsFunctions._replace", false]], "_replace() (optimism.mechanics.newmarkparameters method)": [[2, "optimism.Mechanics.NewmarkParameters._replace", false]], "_replace() (optimism.mesh.mesh method)": [[2, "optimism.Mesh.Mesh._replace", false]], "_replace() (optimism.minimizescalar.settings method)": [[2, "optimism.MinimizeScalar.Settings._replace", false]], "_replace() (optimism.newtonsolver.settings method)": [[2, "optimism.NewtonSolver.Settings._replace", false]], "_replace() (optimism.objective.params method)": [[2, "optimism.Objective.Params._replace", false]], "_replace() (optimism.phasefield.materialpointsimulator.uniaxialoutput method)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput._replace", false]], "_replace() (optimism.phasefield.phasefield.phasefieldfunctions method)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions._replace", false]], "_replace() (optimism.phasefield.phasefieldmaterialmodel.materialmodel method)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel._replace", false]], "_replace() (optimism.phasefield.phasefieldthreshold.properties method)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties._replace", false]], "_replace() (optimism.phasefield.phasefieldthresholdplastic.properties method)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties._replace", false]], "_replace() (optimism.scalarrootfind.settings method)": [[2, "optimism.ScalarRootFind.Settings._replace", false]], "_replace() (optimism.scalarrootfind.solutioninfo method)": [[2, "optimism.ScalarRootFind.SolutionInfo._replace", false]], "_replace() (optimism.trustregionspg.settings method)": [[2, "optimism.TrustRegionSPG.Settings._replace", false]], "_replace() (optimism.vtkwriter.vtkwriter.vtkfieldrecord method)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord._replace", false]], "_sqrt_relative_difference() (in module optimism.tensormath)": [[2, "optimism.TensorMath._sqrt_relative_difference", false]], "_sqrt_symm_jvp() (in module optimism.tensormath)": [[2, "optimism.TensorMath._sqrt_symm_jvp", false]], "_start_time (optimism.timer.timer attribute)": [[2, "optimism.Timer.Timer._start_time", false]], "_symmetric_matrix_function_jvp_helper() (in module optimism.tensormath)": [[2, "optimism.TensorMath._symmetric_matrix_function_jvp_helper", false]], "_two_product() (in module optimism.math)": [[2, "optimism.Math._two_product", false]], "_two_sum() (in module optimism.math)": [[2, "optimism.Math._two_sum", false]], "_write_cell_connectivity() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_cell_connectivity", false]], "_write_cell_fields() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_cell_fields", false]], "_write_cell_types() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_cell_types", false]], "_write_contact_edges() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_contact_edges", false]], "_write_coordinate_data() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_coordinate_data", false]], "_write_header() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_header", false]], "_write_nodal_fields() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_nodal_fields", false]], "_write_out_all_fields_in_dict() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_out_all_fields_in_dict", false]], "abs() (in module optimism.smoothfunctions)": [[2, "optimism.SmoothFunctions.abs", false]], "add_cell_field() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter.add_cell_field", false]], "add_contact_edges() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter.add_contact_edges", false]], "add_nodal_field() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter.add_nodal_field", false]], "add_sphere() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter.add_sphere", false]], "add_vector() (optimism.equationsolversubspace.modelproblem method)": [[2, "optimism.EquationSolverSubspace.ModelProblem.add_vector", false]], "app_data (optimism.objective.params attribute)": [[2, "optimism.Objective.Params.app_data", false]], "apply() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.apply", false]], "apply_precond() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.apply_precond", false]], "apply_transpose() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.apply_transpose", false]], "are_inside_unit_interval() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.are_inside_unit_interval", false]], "are_positive_weights() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.are_positive_weights", false]], "area() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.area", false]], "assemble_area_weighted_gaps() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.assemble_area_weighted_gaps", false]], "assemble_nodal_areas() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.assemble_nodal_areas", false]], "assemble_sparse_stiffness_matrix() (in module optimism.sparsematrixassembler)": [[2, "optimism.SparseMatrixAssembler.assemble_sparse_stiffness_matrix", false]], "assembly_mortar_integral() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.assembly_mortar_integral", false]], "assertarrayequal() (optimism.test.testfixture.testfixture method)": [[9, "optimism.test.TestFixture.TestFixture.assertArrayEqual", false]], "assertarraynear() (optimism.test.testfixture.testfixture method)": [[9, "optimism.test.TestFixture.TestFixture.assertArrayNear", false]], "assertarraynotequal() (optimism.test.testfixture.testfixture method)": [[9, "optimism.test.TestFixture.TestFixture.assertArrayNotEqual", false]], "assertnear() (optimism.test.testfixture.testfixture method)": [[9, "optimism.test.TestFixture.TestFixture.assertNear", false]], "augmented_lagrange_solve() (in module optimism.alsolver)": [[2, "optimism.AlSolver.augmented_lagrange_solve", false]], "average_quadrature_field_over_element() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.average_quadrature_field_over_element", false]], "axisymmetric_element_gradient_transformation() (in module optimism.mechanics)": [[2, "optimism.Mechanics.axisymmetric_element_gradient_transformation", false]], "axisymmetric_element_gradient_transformation() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.axisymmetric_element_gradient_transformation", false]], "axisymmetric_gradient() (in module optimism.mechanics)": [[2, "optimism.Mechanics.axisymmetric_gradient", false]], "axisymmetric_gradient() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.axisymmetric_gradient", false]], "axisymmpatchtest (class in optimism.test.test_axisymmpatchtest)": [[9, "optimism.test.test_AxisymmPatchTest.AxisymmPatchTest", false]], "basefilename (optimism.test.test_vtkwriter.testvtkwriter attribute)": [[9, "optimism.test.test_VTKWriter.TestVTKWriter.baseFileName", false]], "basefilename (optimism.test.test_vtkwriter.testvtkwriterhigherorder attribute)": [[9, "optimism.test.test_VTKWriter.TestVTKWriterHigherOrder.baseFileName", false]], "bc_data (optimism.objective.params attribute)": [[2, "optimism.Objective.Params.bc_data", false]], "beta (optimism.mechanics.newmarkparameters attribute)": [[2, "optimism.Mechanics.NewmarkParameters.beta", false]], "bisection_step() (in module optimism.scalarrootfind)": [[2, "optimism.ScalarRootFind.bisection_step", false]], "bit (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.BIT", false]], "blocks (optimism.mesh.mesh attribute)": [[2, "id14", false], [2, "optimism.Mesh.Mesh.blocks", false]], "bound_constrained_solve() (in module optimism.boundconstrainedsolver)": [[2, "optimism.BoundConstrainedSolver.bound_constrained_solve", false]], "bound_constrained_trust_region_minimize() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.bound_constrained_trust_region_minimize", false]], "boundconstrainedobjective (class in optimism.boundconstrainedobjective)": [[2, "optimism.BoundConstrainedObjective.BoundConstrainedObjective", false]], "cauchy_point_decrease_tol (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.cauchy_point_decrease_tol", false]], "cauchy_point_max_line_search_iters (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.cauchy_point_max_line_search_iters", false]], "cauchy_point_sufficient_decrease_factor (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.cauchy_point_sufficient_decrease_factor", false]], "cg_inexact_solve_ratio (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.cg_inexact_solve_ratio", false]], "cg_inner_products_preconditioned() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.cg_inner_products_preconditioned", false]], "cg_inner_products_unpreconditioned() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.cg_inner_products_unpreconditioned", false]], "cg_tol (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.cg_tol", false]], "char (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.CHAR", false]], "check_quadratic() (optimism.contact.test.test_newtonglobalization.testquadraticsolver method)": [[4, "optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver.check_quadratic", false]], "check_stability (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.check_stability", false]], "check_stability (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.check_stability", false]], "check_stability() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.check_stability", false]], "check_stability() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.check_stability", false]], "combine_blocks() (in module optimism.mesh)": [[2, "optimism.Mesh.combine_blocks", false]], "combine_mesh() (in module optimism.mesh)": [[2, "optimism.Mesh.combine_mesh", false]], "combine_nodesets() (in module optimism.mesh)": [[2, "optimism.Mesh.combine_nodesets", false]], "combine_sidesets() (in module optimism.mesh)": [[2, "optimism.Mesh.combine_sidesets", false]], "combined() (in module optimism.contact.levelset)": [[3, "optimism.contact.Levelset.combined", false]], "component (optimism.functionspace.essentialbc attribute)": [[2, "optimism.FunctionSpace.EssentialBC.component", false]], "compute_algorithmic_energy (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_algorithmic_energy", false]], "compute_average_normal() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.compute_average_normal", false]], "compute_block_diagonal_element_stiffnesses (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_block_diagonal_element_stiffnesses", false]], "compute_closest_distance_to_each_side() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_closest_distance_to_each_side", false]], "compute_closest_distance_to_each_side_smooth() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_closest_distance_to_each_side_smooth", false]], "compute_closest_edges_and_field_weights() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_closest_edges_and_field_weights", false]], "compute_constraint_hessian (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_constraint_hessian", false]], "compute_contact_point_coordinates() (in module optimism.contact.levelsetconstraint)": [[3, "optimism.contact.LevelsetConstraint.compute_contact_point_coordinates", false]], "compute_contact_point_coords_on_edge() (in module optimism.contact.levelsetconstraint)": [[3, "optimism.contact.LevelsetConstraint.compute_contact_point_coords_on_edge", false]], "compute_edge_levelset_constraints() (in module optimism.contact.levelsetconstraint)": [[3, "optimism.contact.LevelsetConstraint.compute_edge_levelset_constraints", false]], "compute_edge_penalty_contact_energy() (in module optimism.contact.penaltycontact)": [[3, "optimism.contact.PenaltyContact.compute_edge_penalty_contact_energy", false]], "compute_edge_vectors() (in module optimism.mesh)": [[2, "optimism.Mesh.compute_edge_vectors", false]], "compute_edge_vectors() (in module optimism.surface)": [[2, "optimism.Surface.compute_edge_vectors", false]], "compute_elastic_linear_strain() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_elastic_linear_strain", false]], "compute_elastic_linear_strain() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.compute_elastic_linear_strain", false]], "compute_elastic_logarithmic_strain() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_elastic_logarithmic_strain", false]], "compute_elastic_logarithmic_strain() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.compute_elastic_logarithmic_strain", false]], "compute_elastic_seth_hill_strain() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_elastic_seth_hill_strain", false]], "compute_elastic_strain() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.compute_elastic_strain", false]], "compute_element_energy() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.compute_element_energy", false]], "compute_element_field_gradient() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.compute_element_field_gradient", false]], "compute_element_hessians (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_element_hessians", false]], "compute_element_masses (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_element_masses", false]], "compute_element_stiffness_from_global_fields() (in module optimism.mechanics)": [[2, "optimism.Mechanics.compute_element_stiffness_from_global_fields", false]], "compute_element_stiffness_from_global_fields() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.compute_element_stiffness_from_global_fields", false]], "compute_element_stiffnesses (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.compute_element_stiffnesses", false]], "compute_element_stiffnesses (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_element_stiffnesses", false]], "compute_element_volumes() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.compute_element_volumes", false]], "compute_element_volumes_axisymmetric() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.compute_element_volumes_axisymmetric", false]], "compute_energy_density (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel.compute_energy_density", false]], "compute_energy_density (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel.compute_energy_density", false]], "compute_error() (in module optimism.contact.test.test_mortargeom)": [[4, "optimism.contact.test.test_MortarGeom.compute_error", false]], "compute_field_gradient() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.compute_field_gradient", false]], "compute_fisher_burmeister_linearization() (in module optimism.contact.penaltycontact)": [[3, "optimism.contact.PenaltyContact.compute_fisher_burmeister_linearization", false]], "compute_flow_direction() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.compute_flow_direction", false]], "compute_flow_direction() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_flow_direction", false]], "compute_flow_stress (optimism.material.hardening.hardeningmodel attribute)": [[5, "optimism.material.Hardening.HardeningModel.compute_flow_stress", false]], "compute_free_energy_density() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.compute_free_energy_density", false]], "compute_friction_energy_from_perp_slip() (in module optimism.contact.friction)": [[3, "optimism.contact.Friction.compute_friction_energy_from_perp_slip", false]], "compute_friction_potential() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_friction_potential", false]], "compute_friction_potential() (in module optimism.contact.levelsetconstraint)": [[3, "optimism.contact.LevelsetConstraint.compute_friction_potential", false]], "compute_friction_potential_on_edge() (in module optimism.contact.levelsetconstraint)": [[3, "optimism.contact.LevelsetConstraint.compute_friction_potential_on_edge", false]], "compute_grid_field() (in module optimism.contact.test.test_cpp)": [[4, "optimism.contact.test.test_Cpp.compute_grid_field", false]], "compute_hardening_energy_density (optimism.material.hardening.hardeningmodel attribute)": [[5, "optimism.material.Hardening.HardeningModel.compute_hardening_energy_density", false]], "compute_initial_state (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel.compute_initial_state", false]], "compute_initial_state (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_initial_state", false]], "compute_initial_state (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.compute_initial_state", false]], "compute_initial_state (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_initial_state", false]], "compute_initial_state (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel.compute_initial_state", false]], "compute_internal_energy (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_internal_energy", false]], "compute_intersection() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.compute_intersection", false]], "compute_levelset_constraints() (in module optimism.contact.levelsetconstraint)": [[3, "optimism.contact.LevelsetConstraint.compute_levelset_constraints", false]], "compute_linear_strain() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.compute_linear_strain", false]], "compute_logarithmic_elastic_strain() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.compute_logarithmic_elastic_strain", false]], "compute_logarithmic_strain() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.compute_logarithmic_strain", false]], "compute_material_qoi (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel.compute_material_qoi", false]], "compute_min_p() (in module optimism.newtonsolver)": [[2, "optimism.NewtonSolver.compute_min_p", false]], "compute_newmark_lagrangian() (in module optimism.mechanics)": [[2, "optimism.Mechanics.compute_newmark_lagrangian", false]], "compute_normal() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.compute_normal", false]], "compute_normal() (in module optimism.surface)": [[2, "optimism.Surface.compute_normal", false]], "compute_normal_from_a() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.compute_normal_from_a", false]], "compute_output_energy_densities_and_fluxes (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_output_energy_densities_and_fluxes", false]], "compute_output_energy_densities_and_stresses (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_output_energy_densities_and_stresses", false]], "compute_output_energy_densities_and_stresses (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.compute_output_energy_densities_and_stresses", false]], "compute_output_energy_density (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel.compute_output_energy_density", false]], "compute_output_kinetic_energy (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_output_kinetic_energy", false]], "compute_output_material_qoi (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.compute_output_material_qoi", false]], "compute_output_strain_energy (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_output_strain_energy", false]], "compute_overstress (optimism.material.hardening.ratesensitivitymodel attribute)": [[5, "optimism.material.Hardening.RateSensitivityModel.compute_overstress", false]], "compute_phase_field_constraint_hessian() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.compute_phase_field_constraint_hessian", false]], "compute_phase_potential_density (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel.compute_phase_potential_density", false]], "compute_phase_potential_energy (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_phase_potential_energy", false]], "compute_potential (optimism.material.hardening.ratesensitivitymodel attribute)": [[5, "optimism.material.Hardening.RateSensitivityModel.compute_potential", false]], "compute_projection_dists() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_projection_dists", false]], "compute_projection_dists_smooth() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_projection_dists_smooth", false]], "compute_q_coordinates() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_q_coordinates", false]], "compute_q_coordinates_from_field_weights() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_q_coordinates_from_field_weights", false]], "compute_quadrature_point_field_gradient() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.compute_quadrature_point_field_gradient", false]], "compute_ray_trace() (optimism.contact.test.test_edgeintersection.testedgeintersection method)": [[4, "optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection.compute_ray_trace", false]], "compute_ray_trace_distance_and_location() (in module optimism.contact.edgeintersection)": [[3, "optimism.contact.EdgeIntersection.compute_ray_trace_distance_and_location", false]], "compute_residual_norm() (in module optimism.test.meshfixture)": [[9, "optimism.test.MeshFixture.compute_residual_norm", false]], "compute_shapes() (in module optimism.interpolants)": [[2, "optimism.Interpolants.compute_shapes", false]], "compute_smoothing_function() (in module optimism.contact.edgeintersection)": [[3, "optimism.contact.EdgeIntersection.compute_smoothing_function", false]], "compute_state_increment() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.compute_state_increment", false]], "compute_state_increment() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_state_increment", false]], "compute_state_increment() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.compute_state_increment", false]], "compute_state_increment() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.compute_state_increment", false]], "compute_state_new (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel.compute_state_new", false]], "compute_state_new (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel.compute_state_new", false]], "compute_state_new() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.compute_state_new", false]], "compute_state_new() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic.compute_state_new", false]], "compute_state_new() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.compute_state_new", false]], "compute_state_new_finite_deformations() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_state_new_finite_deformations", false]], "compute_state_new_finite_deformations() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.compute_state_new_finite_deformations", false]], "compute_state_new_seth_hill() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_state_new_seth_hill", false]], "compute_state_new_small_deformations() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_state_new_small_deformations", false]], "compute_state_new_small_deformations() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.compute_state_new_small_deformations", false]], "compute_strain_energy (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.compute_strain_energy", false]], "compute_strain_energy_densities (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_strain_energy_densities", false]], "compute_strain_energy_density (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel.compute_strain_energy_density", false]], "compute_total_energy() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.compute_total_energy", false]], "compute_total_penalty_contact_energy() (in module optimism.contact.penaltycontact)": [[3, "optimism.contact.PenaltyContact.compute_total_penalty_contact_energy", false]], "compute_traction_potential_energy() (in module optimism.mechanics)": [[2, "optimism.Mechanics.compute_traction_potential_energy", false]], "compute_traction_potential_energy() (in module optimism.test.test_readmesh)": [[9, "optimism.test.test_ReadMesh.compute_traction_potential_energy", false]], "compute_traction_potential_energy_on_edge() (in module optimism.test.test_readmesh)": [[9, "optimism.test.test_ReadMesh.compute_traction_potential_energy_on_edge", false]], "compute_updated_internal_variables (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_updated_internal_variables", false]], "compute_updated_internal_variables (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.compute_updated_internal_variables", false]], "compute_updated_internal_variables (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_updated_internal_variables", false]], "compute_valid_ray_trace_distance() (in module optimism.contact.edgeintersection)": [[3, "optimism.contact.EdgeIntersection.compute_valid_ray_trace_distance", false]], "compute_valid_ray_trace_distance_smoothed() (in module optimism.contact.edgeintersection)": [[3, "optimism.contact.EdgeIntersection.compute_valid_ray_trace_distance_smoothed", false]], "conns (optimism.mesh.mesh attribute)": [[2, "id15", false], [2, "optimism.Mesh.Mesh.conns", false]], "constant_body_force_potential() (optimism.test.test_newmark.dynamicsfixture method)": [[9, "optimism.test.test_Newmark.DynamicsFixture.constant_body_force_potential", false]], "constrained_jacobian_p_vec() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.constrained_jacobian_p_vec", false]], "constrained_jacobian_vec() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.constrained_jacobian_vec", false]], "constrained_residual() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.constrained_residual", false]], "constrainedobjective (class in optimism.constrainedobjective)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective", false]], "constrainedquasiobjective (class in optimism.constrainedobjective)": [[2, "optimism.ConstrainedObjective.ConstrainedQuasiObjective", false]], "constraint() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.constraint", false]], "constraint() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.constraint", false]], "construct_basis_on_poly() (in module optimism.test.test_patchtestpou)": [[9, "optimism.test.test_PatchTestPou.construct_basis_on_poly", false]], "construct_edge_neighbor_map() (in module optimism.contact.search)": [[3, "optimism.contact.Search.construct_edge_neighbor_map", false]], "construct_function_space() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.construct_function_space", false]], "construct_function_space_from_parent_element() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.construct_function_space_from_parent_element", false]], "construct_mesh_from_basic_data() (in module optimism.mesh)": [[2, "optimism.Mesh.construct_mesh_from_basic_data", false]], "construct_quadratic() (in module optimism.newtonsolver)": [[2, "optimism.NewtonSolver.construct_quadratic", false]], "construct_structured_mesh() (in module optimism.mesh)": [[2, "optimism.Mesh.construct_structured_mesh", false]], "construct_weighted_function_space() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.construct_weighted_function_space", false]], "converged (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo.converged", false]], "coordinates (optimism.interpolants.parentelement attribute)": [[2, "id6", false], [2, "optimism.Interpolants.ParentElement.coordinates", false]], "coords (optimism.mesh.mesh attribute)": [[2, "id16", false], [2, "optimism.Mesh.Mesh.coords", false]], "corner() (in module optimism.contact.levelset)": [[3, "optimism.contact.Levelset.corner", false]], "correct (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.correct", false]], "correction_norm (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo.correction_norm", false]], "cos_of_acos_divided_by_3() (in module optimism.tensormath)": [[2, "optimism.TensorMath.cos_of_acos_divided_by_3", false]], "cpp() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.cpp", false]], "cpp_distance() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.cpp_distance", false]], "cpp_line() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.cpp_line", false]], "create_arch_mesh_disp_and_edges() (optimism.test.meshfixture.meshfixture method)": [[9, "optimism.test.MeshFixture.MeshFixture.create_arch_mesh_disp_and_edges", false]], "create_augmented_lagrangian() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.create_augmented_lagrangian", false]], "create_augmented_lagrangian() (optimism.constrainedobjective.constrainedquasiobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedQuasiObjective.create_augmented_lagrangian", false]], "create_cos_mesh_disp_and_edges() (optimism.test.meshfixture.meshfixture method)": [[9, "optimism.test.MeshFixture.MeshFixture.create_cos_mesh_disp_and_edges", false]], "create_dynamics_functions() (in module optimism.mechanics)": [[2, "optimism.Mechanics.create_dynamics_functions", false]], "create_edges() (in module optimism.mesh)": [[2, "optimism.Mesh.create_edges", false]], "create_edges() (in module optimism.surface)": [[2, "optimism.Surface.create_edges", false]], "create_field() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager.create_field", false]], "create_field() (optimism.test.test_newmark.dynamicsfixture method)": [[9, "optimism.test.test_Newmark.DynamicsFixture.create_field", false]], "create_graph() (in module optimism.test.test_patchtestpou)": [[9, "optimism.test.test_PatchTestPou.create_graph", false]], "create_hardening_model() (in module optimism.material.hardening)": [[5, "optimism.material.Hardening.create_hardening_model", false]], "create_higher_order_mesh_from_simplex_mesh() (in module optimism.mesh)": [[2, "optimism.Mesh.create_higher_order_mesh_from_simplex_mesh", false]], "create_linear_op() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.create_linear_op", false]], "create_material_functions() (in module optimism.material.gent)": [[5, "optimism.material.Gent.create_material_functions", false]], "create_material_model_functions() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic.create_material_model_functions", false]], "create_material_model_functions() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.create_material_model_functions", false]], "create_material_model_functions() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic.create_material_model_functions", false]], "create_material_model_functions() (in module optimism.material.multibranchhyperviscoelastic)": [[5, "optimism.material.MultiBranchHyperViscoelastic.create_material_model_functions", false]], "create_material_model_functions() (in module optimism.material.neohookean)": [[5, "optimism.material.Neohookean.create_material_model_functions", false]], "create_material_model_functions() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.create_material_model_functions", false]], "create_material_model_functions() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.create_material_model_functions", false]], "create_mechanics_functions() (in module optimism.mechanics)": [[2, "optimism.Mechanics.create_mechanics_functions", false]], "create_mesh_and_disp() (optimism.test.meshfixture.meshfixture method)": [[9, "optimism.test.MeshFixture.MeshFixture.create_mesh_and_disp", false]], "create_multi_block_mechanics_functions() (in module optimism.mechanics)": [[2, "optimism.Mechanics.create_multi_block_mechanics_functions", false]], "create_nodesets_from_sidesets() (in module optimism.mesh)": [[2, "optimism.Mesh.create_nodesets_from_sidesets", false]], "create_padded_quadrature_rule_1d() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule.create_padded_quadrature_rule_1D", false]], "create_partitions() (in module optimism.test.test_patchtestpou)": [[9, "optimism.test.test_PatchTestPou.create_partitions", false]], "create_phasefield_functions() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.create_phasefield_functions", false]], "create_polys() (optimism.test.test_patchtestpou.patchtestquadraticelements method)": [[9, "optimism.test.test_PatchTestPou.PatchTestQuadraticElements.create_polys", false]], "create_quadrature_rule_1d() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule.create_quadrature_rule_1D", false]], "create_quadrature_rule_on_triangle() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule.create_quadrature_rule_on_triangle", false]], "create_structured_mesh_data() (in module optimism.mesh)": [[2, "optimism.Mesh.create_structured_mesh_data", false]], "cross() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.cross", false]], "cross2() (in module optimism.contact.edgeintersection)": [[3, "optimism.contact.EdgeIntersection.cross2", false]], "data (optimism.vtkwriter.vtkwriter.vtkfieldrecord attribute)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord.data", false]], "datatype (optimism.vtkwriter.vtkwriter.vtkfieldrecord attribute)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord.dataType", false]], "dconstraint() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.dConstraint", false]], "debug_info (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.debug_info", false]], "debug_info (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.debug_info", false]], "default_modify_element_gradient() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.default_modify_element_gradient", false]], "default_values() (in module optimism.vtkwriter)": [[2, "optimism.VTKWriter.default_values", false]], "define_pressure_projection_gradient_tranformation() (in module optimism.mechanics)": [[2, "optimism.Mechanics.define_pressure_projection_gradient_tranformation", false]], "degradation() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.degradation", false]], "degradation() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.degradation", false]], "degradation() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.degradation", false]], "degree (optimism.interpolants.parentelement attribute)": [[2, "id7", false], [2, "optimism.Interpolants.ParentElement.degree", false]], "density (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel.density", false]], "design_data (optimism.objective.params attribute)": [[2, "optimism.Objective.Params.design_data", false]], "det() (in module optimism.tensormath)": [[2, "optimism.TensorMath.det", false]], "detpim1() (in module optimism.tensormath)": [[2, "optimism.TensorMath.detpIm1", false]], "dev() (in module optimism.tensormath)": [[2, "optimism.TensorMath.dev", false]], "deviator() (in module optimism.tensormath)": [[2, "optimism.TensorMath.deviator", false]], "df() (in module optimism.test.test_minimizescalar)": [[9, "optimism.test.test_MinimizeScalar.df", false]], "disable_test_edge_conn() (optimism.test.test_surface.testsinglemeshfixture method)": [[9, "optimism.test.test_Surface.TestSingleMeshFixture.disable_test_edge_conn", false]], "dobjective() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.dObjective", false]], "dofmanager (class in optimism.functionspace)": [[2, "optimism.FunctionSpace.DofManager", false]], "dofmanagertest (class in optimism.test.test_dofmanager)": [[9, "optimism.test.test_DofManager.DofManagerTest", false]], "dogleg_step() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.dogleg_step", false]], "dot() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.dot", false]], "dot() (optimism.lu.lu method)": [[2, "optimism.LU.LU.dot", false]], "dot2() (in module optimism.contact.edgeintersection)": [[3, "optimism.contact.EdgeIntersection.dot2", false]], "dot2() (in module optimism.math)": [[2, "optimism.Math.dot2", false]], "double (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.DOUBLE", false]], "dr() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.dr", false]], "dr() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.dr", false]], "dr_dstrain_and_deqps() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.dr_dstrain_and_deqps", false]], "dr_dstrain_and_deqps() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.dr_dstrain_and_deqps", false]], "dynamic_data (optimism.objective.params attribute)": [[2, "optimism.Objective.Params.dynamic_data", false]], "dynamicpatchtest (class in optimism.test.test_newmark)": [[9, "optimism.test.test_Newmark.DynamicPatchTest", false]], "dynamicsfixture (class in optimism.test.test_newmark)": [[9, "optimism.test.test_Newmark.DynamicsFixture", false]], "dynamicsfunctions (class in optimism.mechanics)": [[2, "optimism.Mechanics.DynamicsFunctions", false]], "e (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties.E", false]], "e (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.E", false]], "edges_from_points() (in module optimism.contact.test.test_cpp)": [[4, "optimism.contact.test.test_Cpp.edges_from_points", false]], "eigen_sym33_non_unit() (in module optimism.tensormath)": [[2, "optimism.TensorMath.eigen_sym33_non_unit", false]], "eigen_sym33_unit() (in module optimism.tensormath)": [[2, "optimism.TensorMath.eigen_sym33_unit", false]], "elastic_deviatoric_free_energy() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.elastic_deviatoric_free_energy", false]], "elastic_deviatoric_free_energy() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.elastic_deviatoric_free_energy", false]], "elastic_deviatoric_free_energy() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.elastic_deviatoric_free_energy", false]], "elastic_deviatoric_free_energy() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.elastic_deviatoric_free_energy", false]], "elastic_deviatoric_free_energy() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.elastic_deviatoric_free_energy", false]], "elastic_free_energy() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.elastic_free_energy", false]], "elastic_free_energy() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.elastic_free_energy", false]], "elastic_volumetric_free_energy() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.elastic_volumetric_free_energy", false]], "elastic_volumetric_free_energy() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.elastic_volumetric_free_energy", false]], "elastic_volumetric_free_energy() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.elastic_volumetric_free_energy", false]], "elastic_volumetric_free_energy() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.elastic_volumetric_free_energy", false]], "elastic_volumetric_free_energy() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.elastic_volumetric_free_energy", false]], "elementtype (optimism.interpolants.parentelement attribute)": [[2, "id8", false], [2, "optimism.Interpolants.ParentElement.elementType", false]], "endpoints (optimism.test.test_quadraturerule.testquadraturerules attribute)": [[9, "optimism.test.test_QuadratureRule.TestQuadratureRules.endpoints", false]], "energy() (in module optimism.test.test_equationsolver)": [[9, "optimism.test.test_EquationSolver.energy", false]], "energy() (in module optimism.test.test_trustregionspg)": [[9, "optimism.test.test_TrustRegionSPG.energy", false]], "energy_density() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.energy_density", false]], "energy_density() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.energy_density", false]], "energy_density() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.energy_density", false]], "energy_density() (in module optimism.phasefield.test.test_phasefielduniaxial)": [[8, "optimism.phasefield.test.test_PhaseFieldUniaxial.energy_density", false]], "energy_density_generic() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.energy_density_generic", false]], "energy_density_generic() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.energy_density_generic", false]], "energy_density_generic() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.energy_density_generic", false]], "energy_density_to_lagrangian_density() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.energy_density_to_lagrangian_density", false]], "energyhistory (optimism.material.materialuniaxialsimulator.uniaxialoutput attribute)": [[5, "id0", false], [5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput.energyHistory", false]], "energyhistory (optimism.phasefield.materialpointsimulator.uniaxialoutput attribute)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput.energyHistory", false]], "equationsolverfixture (class in optimism.test.test_equationsolver)": [[9, "optimism.test.test_EquationSolver.EquationSolverFixture", false]], "essentialbc (class in optimism.functionspace)": [[2, "optimism.FunctionSpace.EssentialBC", false]], "eta1 (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.eta1", false]], "eta1 (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.eta1", false]], "eta2 (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.eta2", false]], "eta2 (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.eta2", false]], "eta3 (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.eta3", false]], "eta3 (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.eta3", false]], "eval_at_iso_points() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule.eval_at_iso_points", false]], "eval_field() (in module optimism.surface)": [[2, "optimism.Surface.eval_field", false]], "eval_linear_field_on_edge() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.eval_linear_field_on_edge", false]], "evaluate_contact_constraints() (in module optimism.contact.penaltycontact)": [[3, "optimism.contact.PenaltyContact.evaluate_contact_constraints", false]], "evaluate_levelset_on_edge() (in module optimism.contact.penaltycontact)": [[3, "optimism.contact.PenaltyContact.evaluate_levelset_on_edge", false]], "evaluate_on_block() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.evaluate_on_block", false]], "evaluate_on_element() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.evaluate_on_element", false]], "f() (in module optimism.test.convexityplot)": [[9, "optimism.test.ConvexityPlot.f", false]], "f() (in module optimism.test.test_minimizescalar)": [[9, "optimism.test.test_MinimizeScalar.f", false]], "f() (in module optimism.test.test_scalarrootfinder)": [[9, "optimism.test.test_ScalarRootFinder.f", false]], "facenodes (optimism.interpolants.parentelement attribute)": [[2, "id9", false], [2, "optimism.Interpolants.ParentElement.faceNodes", false]], "factorize() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.factorize", false]], "fieldtype (optimism.vtkwriter.vtkwriter.vtkfieldrecord attribute)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord.fieldType", false]], "find_generalized_cauchy_point() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.find_generalized_cauchy_point", false]], "find_root() (in module optimism.scalarrootfind)": [[2, "optimism.ScalarRootFind.find_root", false]], "fischer_burmeister() (in module optimism.constrainedobjective)": [[2, "optimism.ConstrainedObjective.fischer_burmeister", false]], "fischer_burmeister() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.fischer_burmeister", false]], "fischer_burmeister_jac_l() (in module optimism.constrainedobjective)": [[2, "optimism.ConstrainedObjective.fischer_burmeister_jac_l", false]], "float (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.FLOAT", false]], "flow_stress() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.flow_stress", false]], "function_calls (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo.function_calls", false]], "functionspace (class in optimism.functionspace)": [[2, "optimism.FunctionSpace.FunctionSpace", false]], "gamma (optimism.mechanics.newmarkparameters attribute)": [[2, "optimism.Mechanics.NewmarkParameters.gamma", false]], "gc (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties.Gc", false]], "gc (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.Gc", false]], "generate_n_random_symmetric_matrices() (in module optimism.test.test_linalg)": [[9, "optimism.test.test_LinAlg.generate_n_random_symmetric_matrices", false]], "generate_random_points_in_triangle() (in module optimism.test.test_interpolants)": [[9, "optimism.test.test_Interpolants.generate_random_points_in_triangle", false]], "get_bc_size() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager.get_bc_size", false]], "get_bc_values() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager.get_bc_values", false]], "get_best_neighbor() (in module optimism.contact.search)": [[3, "optimism.contact.Search.get_best_neighbor", false]], "get_best_neighbors() (in module optimism.contact.search)": [[3, "optimism.contact.Search.get_best_neighbors", false]], "get_best_overlap_vector() (in module optimism.contact.test.test_search)": [[4, "optimism.contact.test.test_Search.get_best_overlap_vector", false]], "get_best_overlap_vector() (in module optimism.contact.test.test_twobodycontact)": [[4, "optimism.contact.test.test_TwoBodyContact.get_best_overlap_vector", false]], "get_blocks() (in module optimism.mesh)": [[2, "optimism.Mesh.get_blocks", false]], "get_closest_distance() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.get_closest_distance", false]], "get_closest_distance_smooth() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.get_closest_distance_smooth", false]], "get_closest_neighbors() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.get_closest_neighbors", false]], "get_closest_two_edges() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.get_closest_two_edges", false]], "get_coords() (in module optimism.surface)": [[2, "optimism.Surface.get_coords", false]], "get_coords_and_distances() (in module optimism.contact.search)": [[3, "optimism.contact.Search.get_coords_and_distances", false]], "get_current_coordinates_at_quadrature_points() (in module optimism.contact.penaltycontact)": [[3, "optimism.contact.PenaltyContact.get_current_coordinates_at_quadrature_points", false]], "get_diagonal_stiffness() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.get_diagonal_stiffness", false]], "get_edge() (optimism.contact.test.test_edgeintersection.testedgeintersection method)": [[4, "optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection.get_edge", false]], "get_edge_coords() (in module optimism.mesh)": [[2, "optimism.Mesh.get_edge_coords", false]], "get_edge_field() (in module optimism.mesh)": [[2, "optimism.Mesh.get_edge_field", false]], "get_edge_node_indices() (in module optimism.mesh)": [[2, "optimism.Mesh.get_edge_node_indices", false]], "get_facet_connectivities() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.get_facet_connectivities", false]], "get_field_index() (in module optimism.surface)": [[2, "optimism.Surface.get_field_index", false]], "get_lobatto_nodes_1d() (in module optimism.interpolants)": [[2, "optimism.Interpolants.get_lobatto_nodes_1d", false]], "get_multipliers() (optimism.boundconstrainedobjective.boundconstrainedobjective method)": [[2, "optimism.BoundConstrainedObjective.BoundConstrainedObjective.get_multipliers", false]], "get_nodal_values_on_edge() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.get_nodal_values_on_edge", false]], "get_potential_interaction_list() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.get_potential_interaction_list", false]], "get_ray() (optimism.contact.test.test_edgeintersection.testedgeintersection method)": [[4, "optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection.get_ray", false]], "get_ray_length_arg_x() (optimism.contact.test.test_edgeintersection.testedgeintersection method)": [[4, "optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection.get_ray_length_arg_x", false]], "get_ray_length_arg_y() (optimism.contact.test.test_edgeintersection.testedgeintersection method)": [[4, "optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection.get_ray_length_arg_y", false]], "get_residual() (optimism.boundconstrainedobjective.boundconstrainedobjective method)": [[2, "optimism.BoundConstrainedObjective.BoundConstrainedObjective.get_residual", false]], "get_residual() (optimism.objective.scaledobjective method)": [[2, "optimism.Objective.ScaledObjective.get_residual", false]], "get_settings() (in module optimism.alsolver)": [[2, "optimism.AlSolver.get_settings", false]], "get_settings() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.get_settings", false]], "get_settings() (in module optimism.minimizescalar)": [[2, "optimism.MinimizeScalar.get_settings", false]], "get_settings() (in module optimism.scalarrootfind)": [[2, "optimism.ScalarRootFind.get_settings", false]], "get_settings() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.get_settings", false]], "get_side_coordinates() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.get_side_coordinates", false]], "get_side_set_segments() (in module optimism.contact.test.test_twobodycontact)": [[4, "optimism.contact.test.test_TwoBodyContact.get_side_set_segments", false]], "get_total_residual() (optimism.boundconstrainedobjective.boundconstrainedobjective method)": [[2, "optimism.BoundConstrainedObjective.BoundConstrainedObjective.get_total_residual", false]], "get_ubcs() (optimism.test.test_newmark.dynamicsfixture method)": [[9, "optimism.test.test_Newmark.DynamicsFixture.get_ubcs", false]], "get_unknown_size() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager.get_unknown_size", false]], "get_unknown_values() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager.get_unknown_values", false]], "get_value() (optimism.boundconstrainedobjective.boundconstrainedobjective method)": [[2, "optimism.BoundConstrainedObjective.BoundConstrainedObjective.get_value", false]], "get_value() (optimism.objective.scaledobjective method)": [[2, "optimism.Objective.ScaledObjective.get_value", false]], "globalized_newton_step() (in module optimism.newtonsolver)": [[2, "optimism.NewtonSolver.globalized_newton_step", false]], "gradient() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.gradient", false]], "gradient() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.gradient", false]], "gradient_2d_to_axisymmetric() (in module optimism.tensormath)": [[2, "optimism.TensorMath.gradient_2D_to_axisymmetric", false]], "gradient_and_tangent() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.gradient_and_tangent", false]], "gradient_l() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.gradient_l", false]], "gradient_p() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.gradient_p", false]], "gradient_p() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.gradient_p", false]], "gradients (optimism.interpolants.shapefunctions attribute)": [[2, "id12", false], [2, "optimism.Interpolants.ShapeFunctions.gradients", false]], "gradofplasticitymodelfixture (class in optimism.material.test.test_j2plastic)": [[6, "optimism.material.test.test_J2Plastic.GradOfPlasticityModelFixture", false]], "gradofplasticphasefieldmodelfixture (class in optimism.phasefield.test.test_phasefieldlorentzplastic)": [[8, "optimism.phasefield.test.test_PhaseFieldLorentzPlastic.GradOfPlasticPhaseFieldModelFixture", false]], "gradofplasticphasefieldmodelfixture (class in optimism.phasefield.test.test_phasefieldthresholdplastic)": [[8, "optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture", false]], "green_lagrange_strain() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic.green_lagrange_strain", false]], "h (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.H", false]], "hardening_energy_density() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.hardening_energy_density", false]], "hardening_energy_density() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.hardening_energy_density", false]], "hardeningmodel (class in optimism.material.hardening)": [[5, "optimism.material.Hardening.HardeningModel", false]], "hessian() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.hessian", false]], "hessian() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.hessian", false]], "hessian_vec() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.hessian_vec", false]], "hessian_vec() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.hessian_vec", false]], "hessrayleigh() (in module optimism.jaxconfig)": [[2, "optimism.JaxConfig.hessrayleigh", false]], "hessvec() (in module optimism.jaxconfig)": [[2, "optimism.JaxConfig.hessvec", false]], "hyperviscomodelfixture (class in optimism.material.test.test_hypervisco)": [[6, "optimism.material.test.test_HyperVisco.HyperViscoModelFixture", false]], "hyperviscomodelfixture (class in optimism.material.test.test_multibranchhypervisco)": [[6, "optimism.material.test.test_MultiBranchHyperVisco.HyperViscoModelFixture", false]], "hyperviscouniaxialstrain (class in optimism.material.test.test_hypervisco)": [[6, "optimism.material.test.test_HyperVisco.HyperViscoUniaxialStrain", false]], "hyperviscouniaxialstrain (class in optimism.material.test.test_multibranchhypervisco)": [[6, "optimism.material.test.test_MultiBranchHyperVisco.HyperViscoUniaxialStrain", false]], "i2() (in module optimism.tensormath)": [[2, "optimism.TensorMath.I2", false]], "if_then_else() (in module optimism.jaxconfig)": [[2, "optimism.JaxConfig.if_then_else", false]], "incremental_potential() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.incremental_potential", false]], "incremental_potential() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.incremental_potential", false]], "incremental_potential() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.incremental_potential", false]], "incremental_potential() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.incremental_potential", false]], "initial_state() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.initial_state", false]], "initialize() (optimism.boundconstrainedobjective.scaledprecondstrategy method)": [[2, "optimism.BoundConstrainedObjective.ScaledPrecondStrategy.initialize", false]], "initialize() (optimism.constrainedobjective.precondstrategy method)": [[2, "optimism.ConstrainedObjective.PrecondStrategy.initialize", false]], "initialize() (optimism.objective.precondstrategy method)": [[2, "optimism.Objective.PrecondStrategy.initialize", false]], "initialize() (optimism.objective.scaledprecondstrategy method)": [[2, "optimism.Objective.ScaledPrecondStrategy.initialize", false]], "initialize() (optimism.objective.twotryprecondstrategy method)": [[2, "optimism.Objective.TwoTryPrecondStrategy.initialize", false]], "insort() (in module optimism.test.test_patchtestpou)": [[9, "optimism.test.test_PatchTestPou.insort", false]], "int (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.INT", false]], "integrate_2d_monomial_on_triangle() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.integrate_2D_monomial_on_triangle", false]], "integrate_element() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.integrate_element", false]], "integrate_element_from_local_field() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.integrate_element_from_local_field", false]], "integrate_function() (in module optimism.surface)": [[2, "optimism.Surface.integrate_function", false]], "integrate_function_on_edge() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.integrate_function_on_edge", false]], "integrate_function_on_edge() (in module optimism.surface)": [[2, "optimism.Surface.integrate_function_on_edge", false]], "integrate_function_on_edges() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.integrate_function_on_edges", false]], "integrate_function_on_surface() (in module optimism.surface)": [[2, "optimism.Surface.integrate_function_on_surface", false]], "integrate_monomial_on_line() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.integrate_monomial_on_line", false]], "integrate_over_block() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.integrate_over_block", false]], "integrate_values() (in module optimism.surface)": [[2, "optimism.Surface.integrate_values", false]], "integrate_with_active_mortar() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.integrate_with_active_mortar", false]], "integrate_with_mortar() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.integrate_with_mortar", false]], "integrated_material_qoi (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.integrated_material_qoi", false]], "interiornodes (optimism.interpolants.parentelement attribute)": [[2, "id10", false], [2, "optimism.Interpolants.ParentElement.interiorNodes", false]], "internalvariablehistory (optimism.material.materialuniaxialsimulator.uniaxialoutput attribute)": [[5, "id1", false], [5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput.internalVariableHistory", false]], "internalvariablehistory (optimism.phasefield.materialpointsimulator.uniaxialoutput attribute)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput.internalVariableHistory", false]], "interpolate_element_kinematics() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.interpolate_element_kinematics", false]], "interpolate_kinematics() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.interpolate_kinematics", false]], "interpolate_nodal_field_on_edge() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.interpolate_nodal_field_on_edge", false]], "interpolate_nodal_field_on_edge() (in module optimism.test.test_readmesh)": [[9, "optimism.test.test_ReadMesh.interpolate_nodal_field_on_edge", false]], "interpolate_to_element_points() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.interpolate_to_element_points", false]], "interpolate_to_point() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.interpolate_to_point", false]], "interpolate_to_points() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.interpolate_to_points", false]], "inv() (in module optimism.tensormath)": [[2, "optimism.TensorMath.inv", false]], "inverse_ncp_hessian_bound (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings.inverse_ncp_hessian_bound", false]], "is_contact_edge() (optimism.contact.test.test_search.testdoublemeshfixture method)": [[4, "optimism.contact.test.test_Search.TestDoubleMeshFixture.is_contact_edge", false]], "is_converged() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.is_converged", false]], "is_converged() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.is_converged", false]], "is_initialized() (optimism.equationsolversubspace.modelproblem method)": [[2, "optimism.EquationSolverSubspace.ModelProblem.is_initialized", false]], "is_inside_triangle() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.is_inside_triangle", false]], "is_integration_edge() (optimism.contact.test.test_search.testdoublemeshfixture method)": [[4, "optimism.contact.test.test_Search.TestDoubleMeshFixture.is_integration_edge", false]], "is_on_boundary() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.is_on_boundary", false]], "is_on_boundary() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.is_on_boundary", false]], "isaxisymmetric (optimism.functionspace.functionspace attribute)": [[2, "id0", false], [2, "optimism.FunctionSpace.FunctionSpace.isAxisymmetric", false]], "iterations (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo.iterations", false]], "j2plasticuniaxial (class in optimism.material.test.test_j2plastic)": [[6, "optimism.material.test.test_J2Plastic.J2PlasticUniaxial", false]], "j2updatefixture (class in optimism.material.test.test_j2plastic)": [[6, "optimism.material.test.test_J2Plastic.J2UpdateFixture", false]], "jacobian_l_vec() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.jacobian_l_vec", false]], "jacobian_p2_vec() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.jacobian_p2_vec", false]], "jacobian_p_vec() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.jacobian_p_vec", false]], "jacobian_p_vec() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.jacobian_p_vec", false]], "jvp_sqrtm() (in module optimism.linalg)": [[2, "optimism.LinAlg.jvp_sqrtm", false]], "kappa (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties.kappa", false]], "kappa (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.kappa", false]], "kinetic_energy_density() (in module optimism.mechanics)": [[2, "optimism.Mechanics.kinetic_energy_density", false]], "kirchhoffstresshistory (optimism.phasefield.materialpointsimulator.uniaxialoutput attribute)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput.kirchhoffStressHistory", false]], "kouri_exact_line_search() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.kouri_exact_line_search", false]], "l (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties.l", false]], "l (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.l", false]], "line_search_backtrack() (in module optimism.minimizescalar)": [[2, "optimism.MinimizeScalar.line_search_backtrack", false]], "line_search_bidirectional() (in module optimism.minimizescalar)": [[2, "optimism.MinimizeScalar.line_search_bidirectional", false]], "line_search_forwardtrack() (in module optimism.minimizescalar)": [[2, "optimism.MinimizeScalar.line_search_forwardtrack", false]], "linear() (in module optimism.material.hardening)": [[5, "optimism.material.Hardening.linear", false]], "linear_op() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.linear_op", false]], "linear_strain() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic.linear_strain", false]], "linear_update() (in module optimism.alsolver)": [[2, "optimism.AlSolver.linear_update", false]], "linearpatchtestlinearelements (class in optimism.test.test_patchtest)": [[9, "optimism.test.test_PatchTest.LinearPatchTestLinearElements", false]], "linearpatchtestquadraticelements (class in optimism.test.test_patchtest)": [[9, "optimism.test.test_PatchTest.LinearPatchTestQuadraticElements", false]], "log_pade_pf() (in module optimism.linalg)": [[2, "optimism.LinAlg.log_pade_pf", false]], "log_sqrt_symm() (in module optimism.tensormath)": [[2, "optimism.TensorMath.log_sqrt_symm", false]], "log_strain() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic.log_strain", false]], "logger() (optimism.timer.timer method)": [[2, "optimism.Timer.Timer.logger", false]], "logm_jvp() (in module optimism.linalg)": [[2, "optimism.LinAlg.logm_jvp", false]], "long (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.LONG", false]], "lu (class in optimism.lu)": [[2, "optimism.LU.LU", false]], "make_disp_grad_from_strain() (in module optimism.material.test.test_j2plastic)": [[6, "optimism.material.test.test_J2Plastic.make_disp_grad_from_strain", false]], "make_high_order_writer_with_fields() (optimism.test.test_vtkwriter.testvtkwriterhigherorder method)": [[9, "optimism.test.test_VTKWriter.TestVTKWriterHigherOrder.make_high_order_writer_with_fields", false]], "make_initial_state() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.make_initial_state", false]], "make_initial_state() (in module optimism.material.gent)": [[5, "optimism.material.Gent.make_initial_state", false]], "make_initial_state() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic.make_initial_state", false]], "make_initial_state() (in module optimism.material.neohookean)": [[5, "optimism.material.Neohookean.make_initial_state", false]], "make_initial_state() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.make_initial_state", false]], "make_initial_state_finite_deformations() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.make_initial_state_finite_deformations", false]], "make_initial_state_finite_deformations() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.make_initial_state_finite_deformations", false]], "make_initial_state_small_deformations() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.make_initial_state_small_deformations", false]], "make_initial_state_small_deformations() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.make_initial_state_small_deformations", false]], "make_parent_element_1d() (in module optimism.interpolants)": [[2, "optimism.Interpolants.make_parent_element_1d", false]], "make_parent_element_2d() (in module optimism.interpolants)": [[2, "optimism.Interpolants.make_parent_element_2d", false]], "make_parent_element_2d_with_bubble() (in module optimism.interpolants)": [[2, "optimism.Interpolants.make_parent_element_2d_with_bubble", false]], "make_parent_elements() (in module optimism.interpolants)": [[2, "optimism.Interpolants.make_parent_elements", false]], "make_properties() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.make_properties", false]], "make_properties() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.make_properties", false]], "make_properties() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.make_properties", false]], "make_properties() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.make_properties", false]], "make_properties() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.make_properties", false]], "makekinematics() (optimism.phasefield.materialpointsimulator.materialpointsimulator static method)": [[7, "optimism.phasefield.MaterialPointSimulator.MaterialPointSimulator.makeKinematics", false]], "makestraintensor_() (in module optimism.material.materialuniaxialsimulator)": [[5, "optimism.material.MaterialUniaxialSimulator.makeStrainTensor_", false]], "map_1d_jac() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.map_1d_jac", false]], "map_affine_1d() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.map_affine_1D", false]], "map_element_shape_grads() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.map_element_shape_grads", false]], "map_to_arch() (in module optimism.test.meshfixture)": [[9, "optimism.test.MeshFixture.map_to_arch", false]], "map_to_cos() (in module optimism.test.meshfixture)": [[9, "optimism.test.MeshFixture.map_to_cos", false]], "materialmodel (class in optimism.material.materialmodel)": [[5, "optimism.material.MaterialModel.MaterialModel", false]], "materialmodel (class in optimism.phasefield.phasefieldmaterialmodel)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel", false]], "materialpointsimulator (class in optimism.phasefield.materialpointsimulator)": [[7, "optimism.phasefield.MaterialPointSimulator.MaterialPointSimulator", false]], "materialuniaxialsimulatorfixture (class in optimism.material.test.test_materialuniaxialsimulator)": [[6, "optimism.material.test.test_MaterialUniaxialSimulator.MaterialUniaxialSimulatorFixture", false]], "matprops (class in optimism.material.materialmodel)": [[5, "optimism.material.MaterialModel.MatProps", false]], "max() (in module optimism.smoothfunctions)": [[2, "optimism.SmoothFunctions.max", false]], "max_al_iters (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings.max_al_iters", false]], "max_cg_iters (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.max_cg_iters", false]], "max_cumulative_cg_iters (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.max_cumulative_cg_iters", false]], "max_cumulative_spg_iters (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.max_cumulative_spg_iters", false]], "max_degree_1d (optimism.test.test_quadraturerule.testquadraturerules attribute)": [[9, "optimism.test.test_QuadratureRule.TestQuadratureRules.max_degree_1D", false]], "max_degree_2d (optimism.test.test_quadraturerule.testquadraturerules attribute)": [[9, "optimism.test.test_QuadratureRule.TestQuadratureRules.max_degree_2D", false]], "max_gmres_iters (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings.max_gmres_iters", false]], "max_gmres_iters (optimism.newtonsolver.settings attribute)": [[2, "optimism.NewtonSolver.Settings.max_gmres_iters", false]], "max_iters (optimism.minimizescalar.settings attribute)": [[2, "optimism.MinimizeScalar.Settings.max_iters", false]], "max_iters (optimism.scalarrootfind.settings attribute)": [[2, "optimism.ScalarRootFind.Settings.max_iters", false]], "max_spectral_step_length (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.max_spectral_step_length", false]], "max_spg_iters (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.max_spg_iters", false]], "max_trust_iters (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.max_trust_iters", false]], "max_trust_iters (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.max_trust_iters", false]], "mechanicsfunctions (class in optimism.mechanics)": [[2, "optimism.Mechanics.MechanicsFunctions", false]], "mechanicsfunctionsfixture (class in optimism.test.test_mechanics)": [[9, "optimism.test.test_Mechanics.MechanicsFunctionsFixture", false]], "mesh (class in optimism.mesh)": [[2, "optimism.Mesh.Mesh", false]], "mesh (optimism.functionspace.functionspace attribute)": [[2, "id1", false], [2, "optimism.FunctionSpace.FunctionSpace.mesh", false]], "mesh_with_blocks() (in module optimism.mesh)": [[2, "optimism.Mesh.mesh_with_blocks", false]], "mesh_with_coords() (in module optimism.mesh)": [[2, "optimism.Mesh.mesh_with_coords", false]], "mesh_with_nodesets() (in module optimism.mesh)": [[2, "optimism.Mesh.mesh_with_nodesets", false]], "meshfixture (class in optimism.test.meshfixture)": [[9, "optimism.test.MeshFixture.MeshFixture", false]], "min() (in module optimism.smoothfunctions)": [[2, "optimism.SmoothFunctions.min", false]], "min_base() (in module optimism.smoothfunctions)": [[2, "optimism.SmoothFunctions.min_base", false]], "min_dist_squared() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.min_dist_squared", false]], "min_spectral_step_length (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.min_spectral_step_length", false]], "min_tr_size (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.min_tr_size", false]], "min_tr_size (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.min_tr_size", false]], "minimize_scalar() (in module optimism.minimizescalar)": [[2, "optimism.MinimizeScalar.minimize_scalar", false]], "mises_invariant() (in module optimism.tensormath)": [[2, "optimism.TensorMath.mises_invariant", false]], "modelproblem (class in optimism.equationsolversubspace)": [[2, "optimism.EquationSolverSubspace.ModelProblem", false]], "module": [[2, "module-optimism", false], [2, "module-optimism.AlSolver", false], [2, "module-optimism.BoundConstrainedObjective", false], [2, "module-optimism.BoundConstrainedSolver", false], [2, "module-optimism.ConstrainedObjective", false], [2, "module-optimism.EquationSolver", false], [2, "module-optimism.EquationSolverSubspace", false], [2, "module-optimism.FunctionSpace", false], [2, "module-optimism.Interpolants", false], [2, "module-optimism.J2PlasticPhaseField", false], [2, "module-optimism.JaxConfig", false], [2, "module-optimism.LU", false], [2, "module-optimism.LinAlg", false], [2, "module-optimism.Math", false], [2, "module-optimism.Mechanics", false], [2, "module-optimism.Mesh", false], [2, "module-optimism.MeshPlot", false], [2, "module-optimism.MinimizeScalar", false], [2, "module-optimism.NewtonSolver", false], [2, "module-optimism.Objective", false], [2, "module-optimism.QuadratureRule", false], [2, "module-optimism.ReadExodusMesh", false], [2, "module-optimism.ReadMesh", false], [2, "module-optimism.ScalarRootFind", false], [2, "module-optimism.SmoothFunctions", false], [2, "module-optimism.SparseCholesky", false], [2, "module-optimism.SparseMatrixAssembler", false], [2, "module-optimism.Surface", false], [2, "module-optimism.TensorMath", false], [2, "module-optimism.Timer", false], [2, "module-optimism.TrustRegionSPG", false], [2, "module-optimism.VTKWriter", false], [2, "module-optimism.WarmStart", false], [3, "module-optimism.contact", false], [3, "module-optimism.contact.Contact", false], [3, "module-optimism.contact.EdgeCpp", false], [3, "module-optimism.contact.EdgeIntersection", false], [3, "module-optimism.contact.Friction", false], [3, "module-optimism.contact.Levelset", false], [3, "module-optimism.contact.LevelsetConstraint", false], [3, "module-optimism.contact.MortarContact", false], [3, "module-optimism.contact.PenaltyContact", false], [3, "module-optimism.contact.Search", false], [4, "module-optimism.contact.test", false], [4, "module-optimism.contact.test.test_Contact", false], [4, "module-optimism.contact.test.test_Cpp", false], [4, "module-optimism.contact.test.test_EdgeIntersection", false], [4, "module-optimism.contact.test.test_LevelsetConstraint", false], [4, "module-optimism.contact.test.test_MortarGeom", false], [4, "module-optimism.contact.test.test_NewtonGlobalization", false], [4, "module-optimism.contact.test.test_Search", false], [4, "module-optimism.contact.test.test_TwoBodyContact", false], [4, "module-optimism.contact.test.test_TwoBodyMortarContact", false], [5, "module-optimism.material", false], [5, "module-optimism.material.Gent", false], [5, "module-optimism.material.Hardening", false], [5, "module-optimism.material.HyperViscoelastic", false], [5, "module-optimism.material.J2Plastic", false], [5, "module-optimism.material.LinearElastic", false], [5, "module-optimism.material.MaterialModel", false], [5, "module-optimism.material.MaterialUniaxialSimulator", false], [5, "module-optimism.material.MultiBranchHyperViscoelastic", false], [5, "module-optimism.material.Neohookean", false], [6, "module-optimism.material.test", false], [6, "module-optimism.material.test.test_Gent", false], [6, "module-optimism.material.test.test_Hardening", false], [6, "module-optimism.material.test.test_HyperVisco", false], [6, "module-optimism.material.test.test_J2Plastic", false], [6, "module-optimism.material.test.test_LinearElastic", false], [6, "module-optimism.material.test.test_MaterialUniaxialSimulator", false], [6, "module-optimism.material.test.test_MultiBranchHyperVisco", false], [6, "module-optimism.material.test.test_RateSensitivity", false], [7, "module-optimism.phasefield", false], [7, "module-optimism.phasefield.MaterialPointSimulator", false], [7, "module-optimism.phasefield.PhaseField", false], [7, "module-optimism.phasefield.PhaseFieldLorentzPlastic", false], [7, "module-optimism.phasefield.PhaseFieldMaterialModel", false], [7, "module-optimism.phasefield.PhaseFieldThreshold", false], [7, "module-optimism.phasefield.PhaseFieldThresholdPlastic", false], [8, "module-optimism.phasefield.test", false], [8, "module-optimism.phasefield.test.plotPhaseFieldThresholdModel", false], [8, "module-optimism.phasefield.test.test_PhaseFieldLorentzPlastic", false], [8, "module-optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch", false], [8, "module-optimism.phasefield.test.test_PhaseFieldThreshold", false], [8, "module-optimism.phasefield.test.test_PhaseFieldThresholdPatch", false], [8, "module-optimism.phasefield.test.test_PhaseFieldThresholdPlastic", false], [8, "module-optimism.phasefield.test.test_PhaseFieldUniaxial", false], [9, "module-optimism.test", false], [9, "module-optimism.test.ConvexityPlot", false], [9, "module-optimism.test.MeshFixture", false], [9, "module-optimism.test.TestFixture", false], [9, "module-optimism.test.test_AxisymmPatchTest", false], [9, "module-optimism.test.test_DofManager", false], [9, "module-optimism.test.test_EquationSolver", false], [9, "module-optimism.test.test_FunctionSpace", false], [9, "module-optimism.test.test_Interpolants", false], [9, "module-optimism.test.test_JaxConfig", false], [9, "module-optimism.test.test_LinAlg", false], [9, "module-optimism.test.test_Math", false], [9, "module-optimism.test.test_Mechanics", false], [9, "module-optimism.test.test_Mesh", false], [9, "module-optimism.test.test_MinimizeScalar", false], [9, "module-optimism.test.test_Newmark", false], [9, "module-optimism.test.test_Objective", false], [9, "module-optimism.test.test_PatchTest", false], [9, "module-optimism.test.test_PatchTestPou", false], [9, "module-optimism.test.test_QuadratureRule", false], [9, "module-optimism.test.test_ReadExodusMesh", false], [9, "module-optimism.test.test_ReadMesh", false], [9, "module-optimism.test.test_ScalarRootFinder", false], [9, "module-optimism.test.test_SmoothFunctions", false], [9, "module-optimism.test.test_SparseMatrix", false], [9, "module-optimism.test.test_SparsePreconditioner", false], [9, "module-optimism.test.test_Surface", false], [9, "module-optimism.test.test_TensorMath", false], [9, "module-optimism.test.test_Traction", false], [9, "module-optimism.test.test_TrustRegionSPG", false], [9, "module-optimism.test.test_VTKWriter", false], [9, "module-optimism.test.test_VolumeAverageJ", false]], "mu (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties.mu", false]], "mu (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.mu", false]], "multiply_by_approx_hessian() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.multiply_by_approx_hessian", false]], "multiply_by_approximate() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.multiply_by_approximate", false]], "multiply_by_transpose() (optimism.lu.lu method)": [[2, "optimism.LU.LU.multiply_by_transpose", false]], "multiply_by_transpose() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.multiply_by_transpose", false]], "my_func() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.my_func", false]], "name (optimism.timer.timer attribute)": [[2, "optimism.Timer.Timer.name", false]], "ncp() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.ncp", false]], "ncp_hessian() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.ncp_hessian", false]], "newmarkparameters (class in optimism.mechanics)": [[2, "optimism.Mechanics.NewmarkParameters", false]], "newton() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.newton", false]], "newton_solve() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.newton_solve", false]], "newton_step() (in module optimism.newtonsolver)": [[2, "optimism.NewtonSolver.newton_step", false]], "newton_step() (in module optimism.scalarrootfind)": [[2, "optimism.ScalarRootFind.newton_step", false]], "no_test_cgunbound() (optimism.test.test_trustregionspg.testtrustregionspgfixture method)": [[9, "optimism.test.test_TrustRegionSPG.TestTrustRegionSPGFixture.no_test_cgunbound", false]], "no_test_hessian() (optimism.test.test_trustregionspg.testtrustregionspgrosenbrock method)": [[9, "optimism.test.test_TrustRegionSPG.TestTrustRegionSPGRosenbrock.no_test_hessian", false]], "no_test_plastic_strain_path() (optimism.phasefield.test.test_phasefieldthresholdplastic.gradofplasticphasefieldmodelfixture method)": [[8, "optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture.no_test_plastic_strain_path", false]], "no_test_plot_high_order_nodes() (optimism.test.test_interpolants.testinterpolants method)": [[9, "optimism.test.test_Interpolants.TestInterpolants.no_test_plot_high_order_nodes", false]], "no_test_plot_shape_functions() 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[[2, "id17", false], [2, "optimism.Mesh.Mesh.nodeSets", false]], "nonlinear_equation_solve() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.nonlinear_equation_solve", false]], "nonmonotone_line_search() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.nonmonotone_line_search", false]], "norm() (in module optimism.tensormath)": [[2, "optimism.TensorMath.norm", false]], "norm_of_deviator() (in module optimism.tensormath)": [[2, "optimism.TensorMath.norm_of_deviator", false]], "norm_of_deviator_squared() (in module optimism.tensormath)": [[2, "optimism.TensorMath.norm_of_deviator_squared", false]], "norm_squared() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.norm_squared", false]], "notest_grad() (optimism.test.test_minimizescalar.testminimizescalarfixture method)": [[9, "optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture.notest_grad", false]], "notest_jit() 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false]], "num_nodes() (in module optimism.mesh)": [[2, "optimism.Mesh.num_nodes", false]], "num_props (optimism.material.materialmodel.matprops attribute)": [[5, "optimism.material.MaterialModel.MatProps.num_props", false]], "num_states (optimism.material.materialmodel.matprops attribute)": [[5, "optimism.material.MaterialModel.MatProps.num_states", false]], "numerical_grad() (in module optimism.test.test_tensormath)": [[9, "optimism.test.test_TensorMath.numerical_grad", false]], "objective (class in optimism.objective)": [[2, "optimism.Objective.Objective", false]], "objective() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.objective", false]], "optimism": [[2, "module-optimism", false]], "optimism.alsolver": [[2, "module-optimism.AlSolver", false]], "optimism.boundconstrainedobjective": [[2, "module-optimism.BoundConstrainedObjective", false]], "optimism.boundconstrainedsolver": [[2, "module-optimism.BoundConstrainedSolver", false]], "optimism.constrainedobjective": [[2, "module-optimism.ConstrainedObjective", false]], "optimism.contact": [[3, "module-optimism.contact", false]], "optimism.contact.contact": [[3, "module-optimism.contact.Contact", false]], "optimism.contact.edgecpp": [[3, "module-optimism.contact.EdgeCpp", false]], "optimism.contact.edgeintersection": [[3, "module-optimism.contact.EdgeIntersection", false]], "optimism.contact.friction": [[3, "module-optimism.contact.Friction", false]], "optimism.contact.levelset": [[3, "module-optimism.contact.Levelset", false]], "optimism.contact.levelsetconstraint": [[3, "module-optimism.contact.LevelsetConstraint", false]], "optimism.contact.mortarcontact": [[3, "module-optimism.contact.MortarContact", false]], "optimism.contact.penaltycontact": [[3, "module-optimism.contact.PenaltyContact", false]], "optimism.contact.search": [[3, "module-optimism.contact.Search", false]], "optimism.contact.test": [[4, "module-optimism.contact.test", false]], "optimism.contact.test.test_contact": [[4, "module-optimism.contact.test.test_Contact", false]], "optimism.contact.test.test_cpp": [[4, "module-optimism.contact.test.test_Cpp", false]], "optimism.contact.test.test_edgeintersection": [[4, "module-optimism.contact.test.test_EdgeIntersection", false]], "optimism.contact.test.test_levelsetconstraint": [[4, "module-optimism.contact.test.test_LevelsetConstraint", false]], "optimism.contact.test.test_mortargeom": [[4, "module-optimism.contact.test.test_MortarGeom", false]], "optimism.contact.test.test_newtonglobalization": [[4, "module-optimism.contact.test.test_NewtonGlobalization", false]], "optimism.contact.test.test_search": [[4, "module-optimism.contact.test.test_Search", false]], "optimism.contact.test.test_twobodycontact": [[4, "module-optimism.contact.test.test_TwoBodyContact", false]], "optimism.contact.test.test_twobodymortarcontact": [[4, "module-optimism.contact.test.test_TwoBodyMortarContact", false]], "optimism.equationsolver": [[2, "module-optimism.EquationSolver", false]], "optimism.equationsolversubspace": [[2, "module-optimism.EquationSolverSubspace", false]], "optimism.functionspace": [[2, "module-optimism.FunctionSpace", false]], "optimism.interpolants": [[2, "module-optimism.Interpolants", false]], "optimism.j2plasticphasefield": [[2, "module-optimism.J2PlasticPhaseField", false]], "optimism.jaxconfig": [[2, "module-optimism.JaxConfig", false]], "optimism.linalg": [[2, "module-optimism.LinAlg", false]], "optimism.lu": [[2, "module-optimism.LU", false]], "optimism.material": [[5, "module-optimism.material", false]], "optimism.material.gent": [[5, "module-optimism.material.Gent", false]], "optimism.material.hardening": [[5, "module-optimism.material.Hardening", false]], "optimism.material.hyperviscoelastic": [[5, "module-optimism.material.HyperViscoelastic", false]], "optimism.material.j2plastic": [[5, 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"module-optimism.material.test.test_J2Plastic", false]], "optimism.material.test.test_linearelastic": [[6, "module-optimism.material.test.test_LinearElastic", false]], "optimism.material.test.test_materialuniaxialsimulator": [[6, "module-optimism.material.test.test_MaterialUniaxialSimulator", false]], "optimism.material.test.test_multibranchhypervisco": [[6, "module-optimism.material.test.test_MultiBranchHyperVisco", false]], "optimism.material.test.test_ratesensitivity": [[6, "module-optimism.material.test.test_RateSensitivity", false]], "optimism.math": [[2, "module-optimism.Math", false]], "optimism.mechanics": [[2, "module-optimism.Mechanics", false]], "optimism.mesh": [[2, "module-optimism.Mesh", false]], "optimism.meshplot": [[2, "module-optimism.MeshPlot", false]], "optimism.minimizescalar": [[2, "module-optimism.MinimizeScalar", false]], "optimism.newtonsolver": [[2, "module-optimism.NewtonSolver", false]], "optimism.objective": [[2, "module-optimism.Objective", false]], "optimism.phasefield": [[7, "module-optimism.phasefield", false]], "optimism.phasefield.materialpointsimulator": [[7, "module-optimism.phasefield.MaterialPointSimulator", false]], "optimism.phasefield.phasefield": [[7, "module-optimism.phasefield.PhaseField", false]], "optimism.phasefield.phasefieldlorentzplastic": [[7, "module-optimism.phasefield.PhaseFieldLorentzPlastic", false]], "optimism.phasefield.phasefieldmaterialmodel": [[7, "module-optimism.phasefield.PhaseFieldMaterialModel", false]], "optimism.phasefield.phasefieldthreshold": [[7, "module-optimism.phasefield.PhaseFieldThreshold", false]], "optimism.phasefield.phasefieldthresholdplastic": [[7, "module-optimism.phasefield.PhaseFieldThresholdPlastic", false]], "optimism.phasefield.test": [[8, "module-optimism.phasefield.test", false]], "optimism.phasefield.test.plotphasefieldthresholdmodel": [[8, "module-optimism.phasefield.test.plotPhaseFieldThresholdModel", false]], "optimism.phasefield.test.test_phasefieldlorentzplastic": 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"module-optimism.ScalarRootFind", false]], "optimism.smoothfunctions": [[2, "module-optimism.SmoothFunctions", false]], "optimism.sparsecholesky": [[2, "module-optimism.SparseCholesky", false]], "optimism.sparsematrixassembler": [[2, "module-optimism.SparseMatrixAssembler", false]], "optimism.surface": [[2, "module-optimism.Surface", false]], "optimism.tensormath": [[2, "module-optimism.TensorMath", false]], "optimism.test": [[9, "module-optimism.test", false]], "optimism.test.convexityplot": [[9, "module-optimism.test.ConvexityPlot", false]], "optimism.test.meshfixture": [[9, "module-optimism.test.MeshFixture", false]], "optimism.test.test_axisymmpatchtest": [[9, "module-optimism.test.test_AxisymmPatchTest", false]], "optimism.test.test_dofmanager": [[9, "module-optimism.test.test_DofManager", false]], "optimism.test.test_equationsolver": [[9, "module-optimism.test.test_EquationSolver", false]], "optimism.test.test_functionspace": [[9, "module-optimism.test.test_FunctionSpace", false]], "optimism.test.test_interpolants": [[9, "module-optimism.test.test_Interpolants", false]], "optimism.test.test_jaxconfig": [[9, "module-optimism.test.test_JaxConfig", false]], "optimism.test.test_linalg": [[9, "module-optimism.test.test_LinAlg", false]], "optimism.test.test_math": [[9, "module-optimism.test.test_Math", false]], "optimism.test.test_mechanics": [[9, "module-optimism.test.test_Mechanics", false]], "optimism.test.test_mesh": [[9, "module-optimism.test.test_Mesh", false]], "optimism.test.test_minimizescalar": [[9, "module-optimism.test.test_MinimizeScalar", false]], "optimism.test.test_newmark": [[9, "module-optimism.test.test_Newmark", false]], "optimism.test.test_objective": [[9, "module-optimism.test.test_Objective", false]], "optimism.test.test_patchtest": [[9, "module-optimism.test.test_PatchTest", false]], "optimism.test.test_patchtestpou": [[9, "module-optimism.test.test_PatchTestPou", false]], "optimism.test.test_quadraturerule": [[9, "module-optimism.test.test_QuadratureRule", false]], "optimism.test.test_readexodusmesh": [[9, "module-optimism.test.test_ReadExodusMesh", false]], "optimism.test.test_readmesh": [[9, "module-optimism.test.test_ReadMesh", false]], "optimism.test.test_scalarrootfinder": [[9, "module-optimism.test.test_ScalarRootFinder", false]], "optimism.test.test_smoothfunctions": [[9, "module-optimism.test.test_SmoothFunctions", false]], "optimism.test.test_sparsematrix": [[9, "module-optimism.test.test_SparseMatrix", false]], "optimism.test.test_sparsepreconditioner": [[9, "module-optimism.test.test_SparsePreconditioner", false]], "optimism.test.test_surface": [[9, "module-optimism.test.test_Surface", false]], "optimism.test.test_tensormath": [[9, "module-optimism.test.test_TensorMath", false]], "optimism.test.test_traction": [[9, "module-optimism.test.test_Traction", false]], "optimism.test.test_trustregionspg": [[9, "module-optimism.test.test_TrustRegionSPG", false]], "optimism.test.test_volumeaveragej": [[9, "module-optimism.test.test_VolumeAverageJ", false]], "optimism.test.test_vtkwriter": [[9, "module-optimism.test.test_VTKWriter", false]], "optimism.test.testfixture": [[9, "module-optimism.test.TestFixture", false]], "optimism.timer": [[2, "module-optimism.Timer", false]], "optimism.trustregionspg": [[2, "module-optimism.TrustRegionSPG", false]], "optimism.vtkwriter": [[2, "module-optimism.VTKWriter", false]], "optimism.warmstart": [[2, "module-optimism.WarmStart", false]], "output_matrix() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.output_matrix", false]], "output_matrix() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.output_matrix", false]], "over_iters (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.over_iters", false]], "param_index_update() (in module optimism.objective)": [[2, "optimism.Objective.param_index_update", false]], "parameterizationtestsuite (class in optimism.test.test_functionspace)": [[9, "optimism.test.test_FunctionSpace.ParameterizationTestSuite", false]], "params (class in optimism.objective)": [[2, "optimism.Objective.Params", false]], "params (in module optimism.contact.friction)": [[3, "optimism.contact.Friction.Params", false]], "parentelement (class in optimism.interpolants)": [[2, "optimism.Interpolants.ParentElement", false]], "parentelement (optimism.mesh.mesh attribute)": [[2, "id18", false], [2, "optimism.Mesh.Mesh.parentElement", false]], "parentelement1d (optimism.mesh.mesh attribute)": [[2, "id19", false], [2, "optimism.Mesh.Mesh.parentElement1d", false]], "parse_2d_to_3d_gradient_transformation() (in module optimism.mechanics)": [[2, "optimism.Mechanics.parse_2D_to_3D_gradient_transformation", false]], "pascal_triangle_monomials() (in module optimism.interpolants)": [[2, "optimism.Interpolants.pascal_triangle_monomials", false]], "patchtestquadraticelements (class in optimism.test.test_patchtestpou)": [[9, "optimism.test.test_PatchTestPou.PatchTestQuadraticElements", false]], "penalty_scaling (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings.penalty_scaling", false]], "phase_potential_density() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.phase_potential_density", false]], "phase_potential_density() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.phase_potential_density", false]], "phase_potential_density() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.phase_potential_density", false]], "phasefieldfunctions (class in optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions", false]], "phasefieldthresholdmodelfixture (class in optimism.phasefield.test.test_phasefieldthreshold)": [[8, "optimism.phasefield.test.test_PhaseFieldThreshold.PhaseFieldThresholdModelFixture", false]], "phasefieldthresholduniaxialfixture (class in optimism.phasefield.test.plotphasefieldthresholdmodel)": [[8, "optimism.phasefield.test.plotPhaseFieldThresholdModel.PhaseFieldThresholdUniaxialFixture", false]], "phasefielduniaxialfixture (class in optimism.phasefield.test.test_phasefielduniaxial)": [[8, "optimism.phasefield.test.test_PhaseFieldUniaxial.PhaseFieldUniaxialFixture", false]], "phasehistory (optimism.phasefield.materialpointsimulator.uniaxialoutput attribute)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput.phaseHistory", false]], "plane() (in module optimism.contact.levelset)": [[3, "optimism.contact.Levelset.plane", false]], "plane_strain_element_gradient_transformation() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.plane_strain_element_gradient_transformation", false]], "plane_strain_gradient() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.plane_strain_gradient", false]], "plane_strain_gradient_transformation() (in module optimism.mechanics)": [[2, "optimism.Mechanics.plane_strain_gradient_transformation", false]], "plasticityonmesh (class in optimism.material.test.test_j2plastic)": [[6, "optimism.material.test.test_J2Plastic.PlasticityOnMesh", false]], "plot_grid() (optimism.contact.test.test_cpp.testedgeintersection method)": [[4, "optimism.contact.test.test_Cpp.TestEdgeIntersection.plot_grid", false]], "plot_mesh() (in module optimism.meshplot)": [[2, "optimism.MeshPlot.plot_mesh", false]], "plot_mesh_with_field() (in module optimism.meshplot)": [[2, "optimism.MeshPlot.plot_mesh_with_field", false]], "plot_solution() (optimism.contact.test.test_twobodycontact.twobodycontactfixture method)": [[4, "optimism.contact.test.test_TwoBodyContact.TwoBodyContactFixture.plot_solution", false]], "plot_solution() (optimism.contact.test.test_twobodymortarcontact.twobodycontactfixture method)": [[4, "optimism.contact.test.test_TwoBodyMortarContact.TwoBodyContactFixture.plot_solution", false]], "power_law() (in module optimism.material.hardening)": [[5, "optimism.material.Hardening.power_law", false]], "power_law_rate_sensitivity() (in module optimism.material.hardening)": [[5, "optimism.material.Hardening.power_law_rate_sensitivity", false]], "powerlawhardeningtestfixture (class in optimism.material.test.test_hardening)": [[6, "optimism.material.test.test_Hardening.PowerLawHardeningTestFixture", false]], "precond_at_attempt() (optimism.boundconstrainedobjective.scaledprecondstrategy method)": [[2, "optimism.BoundConstrainedObjective.ScaledPrecondStrategy.precond_at_attempt", false]], "precond_at_attempt() (optimism.constrainedobjective.precondstrategy method)": [[2, "optimism.ConstrainedObjective.PrecondStrategy.precond_at_attempt", false]], "precond_at_attempt() (optimism.objective.precondstrategy method)": [[2, "optimism.Objective.PrecondStrategy.precond_at_attempt", false]], "precond_at_attempt() (optimism.objective.scaledprecondstrategy method)": [[2, "optimism.Objective.ScaledPrecondStrategy.precond_at_attempt", false]], "precond_at_attempt() (optimism.objective.twotryprecondstrategy method)": [[2, "optimism.Objective.TwoTryPrecondStrategy.precond_at_attempt", false]], "precond_update_func() (optimism.test.test_sparsepreconditioner.sparsecholeskyfixture method)": [[9, "optimism.test.test_SparsePreconditioner.SparseCholeskyFixture.precond_update_func", false]], "preconditioned_project_to_boundary() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.preconditioned_project_to_boundary", false]], "precondstrategy (class in optimism.constrainedobjective)": [[2, "optimism.ConstrainedObjective.PrecondStrategy", false]], "precondstrategy (class in optimism.objective)": [[2, "optimism.Objective.PrecondStrategy", false]], "predict (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.predict", false]], "print_banner() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.print_banner", false]], "print_min_banner() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.print_min_banner", false]], "print_min_banner() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.print_min_banner", false]], "project() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.project", false]], "project_onto_tr() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.project_onto_tr", false]], "project_quadrature_field_to_element_field() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.project_quadrature_field_to_element_field", false]], "project_to_boundary() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.project_to_boundary", false]], "project_to_boundary_with_coefs() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.project_to_boundary_with_coefs", false]], "project_to_boundary_with_coefs() (in module optimism.equationsolversubspace)": [[2, "optimism.EquationSolverSubspace.project_to_boundary_with_coefs", false]], "properties (class in optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties", false]], "properties (class in optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties", false]], "props (optimism.material.materialmodel.matprops attribute)": [[5, "optimism.material.MaterialModel.MatProps.props", false]], "quadratic() (in module optimism.test.test_trustregionspg)": [[9, "optimism.test.test_TrustRegionSPG.quadratic", false]], "quadraticpatchtestquadraticelements (class in optimism.test.test_patchtest)": [[9, "optimism.test.test_PatchTest.QuadraticPatchTestQuadraticElements", false]], "quadraturerule (class in optimism.quadraturerule)": 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[[7, "optimism.phasefield.PhaseFieldThresholdPlastic.r_and_deqps", false]], "r_tol (optimism.scalarrootfind.settings attribute)": [[2, "optimism.ScalarRootFind.Settings.r_tol", false]], "ratesensitivityfixture (class in optimism.material.test.test_ratesensitivity)": [[6, "optimism.material.test.test_RateSensitivity.RateSensitivityFixture", false]], "ratesensitivitymodel (class in optimism.material.hardening)": [[5, "optimism.material.Hardening.RateSensitivityModel", false]], "ratesentivityinsidej2 (class in optimism.material.test.test_ratesensitivity)": [[6, "optimism.material.test.test_RateSensitivity.RateSentivityInsideJ2", false]], "read_exodus_mesh() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh.read_exodus_mesh", false]], "read_exodus_mesh_element_properties() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh.read_exodus_mesh_element_properties", false]], "read_json_mesh() (in module optimism.readmesh)": [[2, "optimism.ReadMesh.read_json_mesh", false]], "relative_gmres_tol (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings.relative_gmres_tol", false]], "relative_gmres_tol (optimism.newtonsolver.settings attribute)": [[2, "optimism.NewtonSolver.Settings.relative_gmres_tol", false]], "reset_kappa() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.reset_kappa", false]], "residual() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.residual", false]], "residual_norm (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo.residual_norm", false]], "right_polar_decomposition() (in module optimism.tensormath)": [[2, "optimism.TensorMath.right_polar_decomposition", false]], "rosenbrock() (in module optimism.test.test_trustregionspg)": [[9, "optimism.test.test_TrustRegionSPG.rosenbrock", false]], "rtsafe_() (in module optimism.scalarrootfind)": [[2, "optimism.ScalarRootFind.rtsafe_", false]], "run() (in module optimism.material.materialuniaxialsimulator)": [[5, "optimism.material.MaterialUniaxialSimulator.run", false]], "run() (optimism.phasefield.materialpointsimulator.materialpointsimulator method)": [[7, "optimism.phasefield.MaterialPointSimulator.MaterialPointSimulator.run", false]], "safe_sqrt_jvp() (in module optimism.math)": [[2, "optimism.Math.safe_sqrt_jvp", false]], "scalarrootfindtestfixture (class in optimism.test.test_scalarrootfinder)": [[9, "optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture", false]], "scalars (optimism.vtkwriter.vtkfieldtype attribute)": [[2, "optimism.VTKWriter.VTKFieldType.SCALARS", false]], "scaledobjective (class in optimism.objective)": [[2, "optimism.Objective.ScaledObjective", false]], "scaledprecondstrategy (class in optimism.boundconstrainedobjective)": [[2, "optimism.BoundConstrainedObjective.ScaledPrecondStrategy", false]], 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module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.settings_with_new_tol", false]], "setup() (optimism.contact.test.test_contact.testcontactfrictiondata method)": [[4, "optimism.contact.test.test_Contact.TestContactFrictionData.setUp", false]], "setup() (optimism.contact.test.test_cpp.testedgeintersection method)": [[4, "optimism.contact.test.test_Cpp.TestEdgeIntersection.setUp", false]], "setup() (optimism.contact.test.test_edgeintersection.testedgeintersection method)": [[4, "optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection.setUp", false]], "setup() (optimism.contact.test.test_levelsetconstraint.testlevelsetcontactconstraint method)": [[4, "optimism.contact.test.test_LevelsetConstraint.TestLevelsetContactConstraint.setUp", false]], "setup() (optimism.contact.test.test_mortargeom.testmortargeom method)": [[4, "optimism.contact.test.test_MortarGeom.TestMortarGeom.setUp", false]], "setup() (optimism.contact.test.test_newtonglobalization.testgmressolver method)": [[4, "optimism.contact.test.test_NewtonGlobalization.TestGMRESSolver.setUp", false]], "setup() (optimism.contact.test.test_newtonglobalization.testquadraticsolver method)": [[4, "optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver.setUp", false]], "setup() (optimism.contact.test.test_search.testdoublemeshfixture method)": [[4, "optimism.contact.test.test_Search.TestDoubleMeshFixture.setUp", false]], "setup() (optimism.contact.test.test_twobodycontact.twobodycontactfixture method)": [[4, "optimism.contact.test.test_TwoBodyContact.TwoBodyContactFixture.setUp", false]], "setup() (optimism.contact.test.test_twobodymortarcontact.twobodycontactfixture method)": [[4, "optimism.contact.test.test_TwoBodyMortarContact.TwoBodyContactFixture.setUp", false]], "setup() (optimism.material.test.test_gent.testgentmaterial method)": [[6, "optimism.material.test.test_Gent.TestGentMaterial.setUp", false]], "setup() (optimism.material.test.test_hardening.powerlawhardeningtestfixture method)": [[6, "optimism.material.test.test_Hardening.PowerLawHardeningTestFixture.setUp", false]], "setup() (optimism.material.test.test_hardening.vocehardeningtestfixture method)": [[6, "optimism.material.test.test_Hardening.VoceHardeningTestFixture.setUp", false]], "setup() (optimism.material.test.test_hypervisco.hyperviscomodelfixture method)": [[6, "optimism.material.test.test_HyperVisco.HyperViscoModelFixture.setUp", false]], "setup() (optimism.material.test.test_j2plastic.gradofplasticitymodelfixture method)": [[6, "optimism.material.test.test_J2Plastic.GradOfPlasticityModelFixture.setUp", false]], "setup() (optimism.material.test.test_j2plastic.j2plasticuniaxial method)": [[6, "optimism.material.test.test_J2Plastic.J2PlasticUniaxial.setUp", false]], "setup() (optimism.material.test.test_j2plastic.j2updatefixture method)": [[6, "optimism.material.test.test_J2Plastic.J2UpdateFixture.setUp", false]], "setup() (optimism.material.test.test_linearelastic.testlinearelasticmaterial method)": [[6, "optimism.material.test.test_LinearElastic.TestLinearElasticMaterial.setUp", false]], "setup() (optimism.material.test.test_multibranchhypervisco.hyperviscomodelfixture method)": [[6, "optimism.material.test.test_MultiBranchHyperVisco.HyperViscoModelFixture.setUp", false]], "setup() (optimism.phasefield.test.plotphasefieldthresholdmodel.phasefieldthresholduniaxialfixture method)": [[8, "optimism.phasefield.test.plotPhaseFieldThresholdModel.PhaseFieldThresholdUniaxialFixture.setUp", false]], "setup() (optimism.phasefield.test.test_phasefieldlorentzplastic.gradofplasticphasefieldmodelfixture method)": [[8, "optimism.phasefield.test.test_PhaseFieldLorentzPlastic.GradOfPlasticPhaseFieldModelFixture.setUp", false]], "setup() (optimism.phasefield.test.test_phasefieldlorentzplasticpatch.testsinglemeshfixture method)": [[8, 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"optimism.phasefield.test.test_PhaseFieldLorentzPlastic.GradOfPlasticPhaseFieldModelFixture.test_zero_point", false]], "test_zero_point() (optimism.phasefield.test.test_phasefieldthreshold.phasefieldthresholdmodelfixture method)": [[8, "optimism.phasefield.test.test_PhaseFieldThreshold.PhaseFieldThresholdModelFixture.test_zero_point", false]], "test_zero_point() (optimism.phasefield.test.test_phasefieldthresholdplastic.gradofplasticphasefieldmodelfixture method)": [[8, "optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture.test_zero_point", false]], "testareaintegrals() (optimism.contact.test.test_mortargeom.testmortargeom method)": [[4, "optimism.contact.test.test_MortarGeom.TestMortarGeom.testAreaIntegrals", false]], "testbubbleinterpolants (class in optimism.test.test_interpolants)": [[9, "optimism.test.test_Interpolants.TestBubbleInterpolants", false]], "testcontactfrictiondata (class in optimism.contact.test.test_contact)": [[4, "optimism.contact.test.test_Contact.TestContactFrictionData", false]], "testdoublemeshfixture (class in optimism.contact.test.test_search)": [[4, "optimism.contact.test.test_Search.TestDoubleMeshFixture", false]], "testedgeintersection (class in optimism.contact.test.test_cpp)": [[4, "optimism.contact.test.test_Cpp.TestEdgeIntersection", false]], "testedgeintersection (class in optimism.contact.test.test_edgeintersection)": [[4, "optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection", false]], "testedgeswithcommonpoint() (optimism.contact.test.test_mortargeom.testmortargeom method)": [[4, "optimism.contact.test.test_MortarGeom.TestMortarGeom.testEdgesWithCommonPoint", false]], "testedgeswithtwocommonpoints() (optimism.contact.test.test_mortargeom.testmortargeom method)": [[4, "optimism.contact.test.test_MortarGeom.TestMortarGeom.testEdgesWithTwoCommonPoints", false]], "testfixture (class in optimism.test.testfixture)": [[9, "optimism.test.TestFixture.TestFixture", false]], 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"optimism.test.test_JaxConfig.TestJaxConfiguration", false]], "testlevelsetcontactconstraint (class in optimism.contact.test.test_levelsetconstraint)": [[4, "optimism.contact.test.test_LevelsetConstraint.TestLevelsetContactConstraint", false]], "testlinalg (class in optimism.test.test_linalg)": [[9, "optimism.test.test_LinAlg.TestLinAlg", false]], "testlinearelasticmaterial (class in optimism.material.test.test_linearelastic)": [[6, "optimism.material.test.test_LinearElastic.TestLinearElasticMaterial", false]], "testmathinnerproduct (class in optimism.test.test_math)": [[9, "optimism.test.test_Math.TestMathInnerProduct", false]], "testmathsum (class in optimism.test.test_math)": [[9, "optimism.test.test_Math.TestMathSum", false]], "testmeshreaddata (class in optimism.test.test_readexodusmesh)": [[9, "optimism.test.test_ReadExodusMesh.TestMeshReadData", false]], "testmeshreaddata (class in optimism.test.test_readmesh)": [[9, "optimism.test.test_ReadMesh.TestMeshReadData", false]], 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(optimism.test.test_interpolants.testinterpolants attribute)": [[9, "optimism.test.test_Interpolants.TestInterpolants._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_jaxconfig.testjaxconfiguration attribute)": [[9, "optimism.test.test_JaxConfig.TestJaxConfiguration._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_linalg.testlinalg attribute)": [[9, "optimism.test.test_LinAlg.TestLinAlg._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_math.testmathinnerproduct attribute)": [[9, "optimism.test.test_Math.TestMathInnerProduct._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_math.testmathsum attribute)": [[9, "optimism.test.test_Math.TestMathSum._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_mechanics.mechanicsfunctionsfixture attribute)": [[9, "optimism.test.test_Mechanics.MechanicsFunctionsFixture._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_mesh.testsinglemeshfixture attribute)": [[9, "optimism.test.test_Mesh.TestSingleMeshFixture._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_minimizescalar.testminimizescalarfixture attribute)": [[9, "optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_newmark.dynamicpatchtest attribute)": [[9, "optimism.test.test_Newmark.DynamicPatchTest._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_newmark.dynamicsfixture attribute)": [[9, "optimism.test.test_Newmark.DynamicsFixture._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_objective.testobjective attribute)": [[9, "optimism.test.test_Objective.TestObjective._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_patchtest.linearpatchtestlinearelements attribute)": [[9, "optimism.test.test_PatchTest.LinearPatchTestLinearElements._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_patchtest.linearpatchtestquadraticelements attribute)": [[9, "optimism.test.test_PatchTest.LinearPatchTestQuadraticElements._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_patchtest.quadraticpatchtestquadraticelements attribute)": [[9, "optimism.test.test_PatchTest.QuadraticPatchTestQuadraticElements._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_patchtestpou.patchtestquadraticelements attribute)": [[9, "optimism.test.test_PatchTestPou.PatchTestQuadraticElements._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_quadraturerule.testquadraturerules attribute)": [[9, "optimism.test.test_QuadratureRule.TestQuadratureRules._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_readexodusmesh.testmeshreaddata attribute)": [[9, "optimism.test.test_ReadExodusMesh.TestMeshReadData._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_readexodusmesh.testmeshreadpatchtest attribute)": [[9, "optimism.test.test_ReadExodusMesh.TestMeshReadPatchTest._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_readexodusmesh.testmeshreadpropertiestest attribute)": [[9, "optimism.test.test_ReadExodusMesh.TestMeshReadPropertiesTest._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_readmesh.testmeshreaddata attribute)": [[9, "optimism.test.test_ReadMesh.TestMeshReadData._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_readmesh.testmeshreadpatchtest attribute)": [[9, "optimism.test.test_ReadMesh.TestMeshReadPatchTest._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_scalarrootfinder.scalarrootfindtestfixture attribute)": [[9, "optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_smoothfunctions.testsmoothfunctions attribute)": [[9, "optimism.test.test_SmoothFunctions.TestSmoothFunctions._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_sparsematrix.sparsepatchfixture attribute)": [[9, "optimism.test.test_SparseMatrix.SparsePatchFixture._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_sparsepreconditioner.sparsecholeskyfixture attribute)": [[9, "optimism.test.test_SparsePreconditioner.SparseCholeskyFixture._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_surface.testsinglemeshfixture attribute)": [[9, "optimism.test.test_Surface.TestSingleMeshFixture._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_tensormath.tensormathfixture attribute)": [[9, "optimism.test.test_TensorMath.TensorMathFixture._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_traction.tractionpatch attribute)": [[9, "optimism.test.test_Traction.TractionPatch._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_trustregionspg.testprojectiononboundary attribute)": [[9, "optimism.test.test_TrustRegionSPG.TestProjectionOnBoundary._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_trustregionspg.testsubproblemsolvefixture attribute)": [[9, "optimism.test.test_TrustRegionSPG.TestSubproblemSolveFixture._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_trustregionspg.testtrustregionspgfixture attribute)": [[9, "optimism.test.test_TrustRegionSPG.TestTrustRegionSPGFixture._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_trustregionspg.testtrustregionspgrosenbrock attribute)": [[9, "optimism.test.test_TrustRegionSPG.TestTrustRegionSPGRosenbrock._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_trustregionspg.trspgcauchypointfixture attribute)": [[9, "optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_volumeaveragej.testvolumeaverage attribute)": [[9, "optimism.test.test_VolumeAverageJ.TestVolumeAverage._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_vtkwriter.testvtkwriter attribute)": [[9, "optimism.test.test_VTKWriter.TestVTKWriter._classSetupFailed", false]], "_classsetupfailed (optimism.test.test_vtkwriter.testvtkwriterhigherorder attribute)": [[9, "optimism.test.test_VTKWriter.TestVTKWriterHigherOrder._classSetupFailed", false]], "_classsetupfailed (optimism.test.testfixture.testfixture attribute)": [[9, "optimism.test.TestFixture.TestFixture._classSetupFailed", false]], "_compute_block_diagonal_element_stiffnesses() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField._compute_block_diagonal_element_stiffnesses", false]], "_compute_dissipated_energy() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._compute_dissipated_energy", false]], "_compute_dissipation() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic._compute_dissipation", false]], "_compute_elastic_infinitesimal_strain() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField._compute_elastic_infinitesimal_strain", false]], "_compute_elastic_linear_strain() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic._compute_elastic_linear_strain", false]], "_compute_elastic_logarithmic_strain() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._compute_elastic_logarithmic_strain", false]], "_compute_elastic_logarithmic_strain() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic._compute_elastic_logarithmic_strain", false]], "_compute_element_masses() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_element_masses", false]], "_compute_element_stiffnesses() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_element_stiffnesses", false]], "_compute_element_stiffnesses() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField._compute_element_stiffnesses", false]], "_compute_element_stiffnesses_multi_block() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_element_stiffnesses_multi_block", false]], "_compute_initial_state_multi_block() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_initial_state_multi_block", false]], "_compute_kinetic_energy() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_kinetic_energy", false]], "_compute_newmark_element_hessians() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_newmark_element_hessians", false]], "_compute_state_increment() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._compute_state_increment", false]], "_compute_state_new() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._compute_state_new", false]], "_compute_state_new() (in module optimism.material.neohookean)": [[5, "optimism.material.Neohookean._compute_state_new", false]], "_compute_strain_energy() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_strain_energy", false]], "_compute_strain_energy_multi_block() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_strain_energy_multi_block", false]], "_compute_updated_internal_variables() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_updated_internal_variables", false]], "_compute_updated_internal_variables_multi_block() (in module optimism.mechanics)": [[2, "optimism.Mechanics._compute_updated_internal_variables_multi_block", false]], "_dissipation_potential() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._dissipation_potential", false]], "_energy_density() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._energy_density", false]], "_energy_density() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic._energy_density", false]], "_eq_strain_energy() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._eq_strain_energy", false]], "_exp_relative_difference() (in module optimism.tensormath)": [[2, "optimism.TensorMath._exp_relative_difference", false]], "_exp_symm_jvp() (in module optimism.tensormath)": [[2, "optimism.TensorMath._exp_symm_jvp", false]], "_field_defaults (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings._field_defaults", false]], "_field_defaults (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings._field_defaults", false]], "_field_defaults (optimism.material.hardening.hardeningmodel attribute)": [[5, "optimism.material.Hardening.HardeningModel._field_defaults", false]], "_field_defaults (optimism.material.hardening.ratesensitivitymodel attribute)": [[5, "optimism.material.Hardening.RateSensitivityModel._field_defaults", false]], "_field_defaults (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel._field_defaults", false]], "_field_defaults (optimism.material.materialmodel.matprops attribute)": [[5, "optimism.material.MaterialModel.MatProps._field_defaults", false]], "_field_defaults (optimism.material.materialuniaxialsimulator.uniaxialoutput attribute)": [[5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput._field_defaults", false]], "_field_defaults (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions._field_defaults", false]], "_field_defaults (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions._field_defaults", false]], "_field_defaults (optimism.mechanics.newmarkparameters attribute)": [[2, "optimism.Mechanics.NewmarkParameters._field_defaults", false]], "_field_defaults (optimism.mesh.mesh attribute)": [[2, "optimism.Mesh.Mesh._field_defaults", false]], "_field_defaults (optimism.minimizescalar.settings attribute)": [[2, "optimism.MinimizeScalar.Settings._field_defaults", false]], "_field_defaults (optimism.newtonsolver.settings attribute)": [[2, "optimism.NewtonSolver.Settings._field_defaults", false]], "_field_defaults (optimism.objective.params attribute)": [[2, "optimism.Objective.Params._field_defaults", false]], "_field_defaults (optimism.phasefield.materialpointsimulator.uniaxialoutput attribute)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput._field_defaults", false]], "_field_defaults (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions._field_defaults", false]], "_field_defaults (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel._field_defaults", false]], "_field_defaults (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties._field_defaults", false]], "_field_defaults (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties._field_defaults", false]], "_field_defaults (optimism.scalarrootfind.settings attribute)": [[2, "optimism.ScalarRootFind.Settings._field_defaults", false]], "_field_defaults (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo._field_defaults", false]], "_field_defaults (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings._field_defaults", false]], "_field_defaults (optimism.vtkwriter.vtkwriter.vtkfieldrecord attribute)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord._field_defaults", false]], "_fields (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings._fields", false]], "_fields (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings._fields", false]], "_fields (optimism.material.hardening.hardeningmodel attribute)": [[5, "optimism.material.Hardening.HardeningModel._fields", false]], "_fields (optimism.material.hardening.ratesensitivitymodel attribute)": [[5, "optimism.material.Hardening.RateSensitivityModel._fields", false]], "_fields (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel._fields", false]], "_fields (optimism.material.materialmodel.matprops attribute)": [[5, "optimism.material.MaterialModel.MatProps._fields", false]], "_fields (optimism.material.materialuniaxialsimulator.uniaxialoutput attribute)": [[5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput._fields", false]], "_fields (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions._fields", false]], "_fields (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions._fields", false]], "_fields (optimism.mechanics.newmarkparameters attribute)": [[2, "optimism.Mechanics.NewmarkParameters._fields", false]], "_fields (optimism.mesh.mesh attribute)": [[2, "optimism.Mesh.Mesh._fields", false]], "_fields (optimism.minimizescalar.settings attribute)": [[2, "optimism.MinimizeScalar.Settings._fields", false]], "_fields (optimism.newtonsolver.settings attribute)": [[2, "optimism.NewtonSolver.Settings._fields", false]], "_fields (optimism.objective.params attribute)": [[2, "optimism.Objective.Params._fields", false]], "_fields (optimism.phasefield.materialpointsimulator.uniaxialoutput attribute)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput._fields", false]], "_fields (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions._fields", false]], "_fields (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel._fields", false]], "_fields (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties._fields", false]], "_fields (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties._fields", false]], "_fields (optimism.scalarrootfind.settings attribute)": [[2, "optimism.ScalarRootFind.Settings._fields", false]], "_fields (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo._fields", false]], "_fields (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings._fields", false]], "_fields (optimism.vtkwriter.vtkwriter.vtkfieldrecord attribute)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord._fields", false]], "_float_split() (in module optimism.math)": [[2, "optimism.Math._float_split", false]], "_gauss_quad_1d_1pt() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule._gauss_quad_1D_1pt", false]], "_gauss_quad_1d_2pt() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule._gauss_quad_1D_2pt", false]], "_gauss_quad_1d_3pt() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule._gauss_quad_1D_3pt", false]], "_gauss_quad_1d_4pt() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule._gauss_quad_1D_4pt", false]], "_gauss_quad_1d_5pt() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule._gauss_quad_1D_5pt", false]], "_gent_3d_energy_density() (in module optimism.material.gent)": [[5, "optimism.material.Gent._gent_3D_energy_density", false]], "_get_vertex_nodes_from_exodus_tri6_mesh() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._get_vertex_nodes_from_exodus_tri6_mesh", false]], "_linear_elastic_energy_density() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic._linear_elastic_energy_density", false]], "_log_relative_difference() (in module optimism.tensormath)": [[2, "optimism.TensorMath._log_relative_difference", false]], "_log_symm_jvp() (in module optimism.tensormath)": [[2, "optimism.TensorMath._log_symm_jvp", false]], "_logm_iss() (in module optimism.linalg)": [[2, "optimism.LinAlg._logm_iss", false]], "_make() (optimism.alsolver.settings class method)": [[2, "optimism.AlSolver.Settings._make", false]], "_make() (optimism.equationsolver.settings class method)": [[2, "optimism.EquationSolver.Settings._make", false]], "_make() (optimism.material.hardening.hardeningmodel class method)": [[5, "optimism.material.Hardening.HardeningModel._make", false]], "_make() (optimism.material.hardening.ratesensitivitymodel class method)": [[5, "optimism.material.Hardening.RateSensitivityModel._make", false]], "_make() (optimism.material.materialmodel.materialmodel class method)": [[5, "optimism.material.MaterialModel.MaterialModel._make", false]], "_make() (optimism.material.materialmodel.matprops class method)": [[5, "optimism.material.MaterialModel.MatProps._make", false]], "_make() (optimism.material.materialuniaxialsimulator.uniaxialoutput class method)": [[5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput._make", false]], "_make() (optimism.mechanics.dynamicsfunctions class method)": [[2, "optimism.Mechanics.DynamicsFunctions._make", false]], "_make() (optimism.mechanics.mechanicsfunctions class method)": [[2, "optimism.Mechanics.MechanicsFunctions._make", false]], "_make() (optimism.mechanics.newmarkparameters class method)": [[2, "optimism.Mechanics.NewmarkParameters._make", false]], "_make() (optimism.mesh.mesh class method)": [[2, "optimism.Mesh.Mesh._make", false]], "_make() (optimism.minimizescalar.settings class method)": [[2, "optimism.MinimizeScalar.Settings._make", false]], "_make() (optimism.newtonsolver.settings class method)": [[2, "optimism.NewtonSolver.Settings._make", false]], "_make() (optimism.objective.params class method)": [[2, "optimism.Objective.Params._make", false]], "_make() (optimism.phasefield.materialpointsimulator.uniaxialoutput class method)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput._make", false]], "_make() (optimism.phasefield.phasefield.phasefieldfunctions class method)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions._make", false]], "_make() (optimism.phasefield.phasefieldmaterialmodel.materialmodel class method)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel._make", false]], "_make() (optimism.phasefield.phasefieldthreshold.properties class method)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties._make", false]], "_make() (optimism.phasefield.phasefieldthresholdplastic.properties class method)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties._make", false]], "_make() (optimism.scalarrootfind.settings class method)": [[2, "optimism.ScalarRootFind.Settings._make", false]], "_make() (optimism.scalarrootfind.solutioninfo class method)": [[2, "optimism.ScalarRootFind.SolutionInfo._make", false]], "_make() (optimism.trustregionspg.settings class method)": [[2, "optimism.TrustRegionSPG.Settings._make", false]], "_make() (optimism.vtkwriter.vtkwriter.vtkfieldrecord class method)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord._make", false]], "_make_hessian_bc_mask() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager._make_hessian_bc_mask", false]], "_make_hessian_coordinates() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager._make_hessian_coordinates", false]], "_make_properties() (in module optimism.material.gent)": [[5, "optimism.material.Gent._make_properties", false]], "_make_properties() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._make_properties", false]], "_make_properties() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic._make_properties", false]], "_make_properties() (in module optimism.material.neohookean)": [[5, "optimism.material.Neohookean._make_properties", false]], "_neohookean_3d_energy_density() (in module optimism.material.neohookean)": [[5, "optimism.material.Neohookean._neohookean_3D_energy_density", false]], "_neq_strain_energy() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic._neq_strain_energy", false]], "_pow_relative_difference() (in module optimism.tensormath)": [[2, "optimism.TensorMath._pow_relative_difference", false]], "_pow_symm_jvp() (in module optimism.tensormath)": [[2, "optimism.TensorMath._pow_symm_jvp", false]], "_read_block_conns() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_block_conns", false]], "_read_block_variable_values() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_block_variable_values", false]], "_read_blocks() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_blocks", false]], "_read_coordinates() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_coordinates", false]], "_read_element_type() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_element_type", false]], "_read_names_list() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_names_list", false]], "_read_node_sets() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_node_sets", false]], "_read_side_sets() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh._read_side_sets", false]], "_relative_log_difference() (in module optimism.tensormath)": [[2, "optimism.TensorMath._relative_log_difference", false]], "_relative_log_difference_no_tolerance_check() (in module optimism.tensormath)": [[2, "optimism.TensorMath._relative_log_difference_no_tolerance_check", false]], "_relative_log_difference_taylor() (in module optimism.tensormath)": [[2, "optimism.TensorMath._relative_log_difference_taylor", false]], "_replace() (optimism.alsolver.settings method)": [[2, "optimism.AlSolver.Settings._replace", false]], "_replace() (optimism.equationsolver.settings method)": [[2, "optimism.EquationSolver.Settings._replace", false]], "_replace() (optimism.material.hardening.hardeningmodel method)": [[5, "optimism.material.Hardening.HardeningModel._replace", false]], "_replace() (optimism.material.hardening.ratesensitivitymodel method)": [[5, "optimism.material.Hardening.RateSensitivityModel._replace", false]], "_replace() (optimism.material.materialmodel.materialmodel method)": [[5, "optimism.material.MaterialModel.MaterialModel._replace", false]], "_replace() (optimism.material.materialmodel.matprops method)": [[5, "optimism.material.MaterialModel.MatProps._replace", false]], "_replace() (optimism.material.materialuniaxialsimulator.uniaxialoutput method)": [[5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput._replace", false]], "_replace() (optimism.mechanics.dynamicsfunctions method)": [[2, "optimism.Mechanics.DynamicsFunctions._replace", false]], "_replace() (optimism.mechanics.mechanicsfunctions method)": [[2, "optimism.Mechanics.MechanicsFunctions._replace", false]], "_replace() (optimism.mechanics.newmarkparameters method)": [[2, "optimism.Mechanics.NewmarkParameters._replace", false]], "_replace() (optimism.mesh.mesh method)": [[2, "optimism.Mesh.Mesh._replace", false]], "_replace() (optimism.minimizescalar.settings method)": [[2, "optimism.MinimizeScalar.Settings._replace", false]], "_replace() (optimism.newtonsolver.settings method)": [[2, "optimism.NewtonSolver.Settings._replace", false]], "_replace() (optimism.objective.params method)": [[2, "optimism.Objective.Params._replace", false]], "_replace() (optimism.phasefield.materialpointsimulator.uniaxialoutput method)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput._replace", false]], "_replace() (optimism.phasefield.phasefield.phasefieldfunctions method)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions._replace", false]], "_replace() (optimism.phasefield.phasefieldmaterialmodel.materialmodel method)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel._replace", false]], "_replace() (optimism.phasefield.phasefieldthreshold.properties method)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties._replace", false]], "_replace() (optimism.phasefield.phasefieldthresholdplastic.properties method)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties._replace", false]], "_replace() (optimism.scalarrootfind.settings method)": [[2, "optimism.ScalarRootFind.Settings._replace", false]], "_replace() (optimism.scalarrootfind.solutioninfo method)": [[2, "optimism.ScalarRootFind.SolutionInfo._replace", false]], "_replace() (optimism.trustregionspg.settings method)": [[2, "optimism.TrustRegionSPG.Settings._replace", false]], "_replace() (optimism.vtkwriter.vtkwriter.vtkfieldrecord method)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord._replace", false]], "_sqrt_relative_difference() (in module optimism.tensormath)": [[2, "optimism.TensorMath._sqrt_relative_difference", false]], "_sqrt_symm_jvp() (in module optimism.tensormath)": [[2, "optimism.TensorMath._sqrt_symm_jvp", false]], "_start_time (optimism.timer.timer attribute)": [[2, "optimism.Timer.Timer._start_time", false]], "_symmetric_matrix_function_jvp_helper() (in module optimism.tensormath)": [[2, "optimism.TensorMath._symmetric_matrix_function_jvp_helper", false]], "_two_product() (in module optimism.math)": [[2, "optimism.Math._two_product", false]], "_two_sum() (in module optimism.math)": [[2, "optimism.Math._two_sum", false]], "_write_cell_connectivity() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_cell_connectivity", false]], "_write_cell_fields() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_cell_fields", false]], "_write_cell_types() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_cell_types", false]], "_write_contact_edges() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_contact_edges", false]], "_write_coordinate_data() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_coordinate_data", false]], "_write_header() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_header", false]], "_write_nodal_fields() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_nodal_fields", false]], "_write_out_all_fields_in_dict() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter._write_out_all_fields_in_dict", false]], "abs() (in module optimism.smoothfunctions)": [[2, "optimism.SmoothFunctions.abs", false]], "add_cell_field() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter.add_cell_field", false]], "add_contact_edges() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter.add_contact_edges", false]], "add_nodal_field() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter.add_nodal_field", false]], "add_sphere() (optimism.vtkwriter.vtkwriter method)": [[2, "optimism.VTKWriter.VTKWriter.add_sphere", false]], "add_vector() (optimism.equationsolversubspace.modelproblem method)": [[2, "optimism.EquationSolverSubspace.ModelProblem.add_vector", false]], "app_data (optimism.objective.params attribute)": [[2, "optimism.Objective.Params.app_data", false]], "apply() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.apply", false]], "apply_precond() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.apply_precond", false]], "apply_transpose() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.apply_transpose", false]], "are_inside_unit_interval() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.are_inside_unit_interval", false]], "are_positive_weights() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.are_positive_weights", false]], "area() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.area", false]], "assemble_area_weighted_gaps() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.assemble_area_weighted_gaps", false]], "assemble_nodal_areas() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.assemble_nodal_areas", false]], "assemble_sparse_stiffness_matrix() (in module optimism.sparsematrixassembler)": [[2, "optimism.SparseMatrixAssembler.assemble_sparse_stiffness_matrix", false]], "assembly_mortar_integral() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.assembly_mortar_integral", false]], "assertarrayequal() (optimism.test.testfixture.testfixture method)": [[9, "optimism.test.TestFixture.TestFixture.assertArrayEqual", false]], "assertarraynear() (optimism.test.testfixture.testfixture method)": [[9, "optimism.test.TestFixture.TestFixture.assertArrayNear", false]], "assertarraynotequal() (optimism.test.testfixture.testfixture method)": [[9, "optimism.test.TestFixture.TestFixture.assertArrayNotEqual", false]], "assertnear() (optimism.test.testfixture.testfixture method)": [[9, "optimism.test.TestFixture.TestFixture.assertNear", false]], "augmented_lagrange_solve() (in module optimism.alsolver)": [[2, "optimism.AlSolver.augmented_lagrange_solve", false]], "average_quadrature_field_over_element() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.average_quadrature_field_over_element", false]], "axisymmetric_element_gradient_transformation() (in module optimism.mechanics)": [[2, "optimism.Mechanics.axisymmetric_element_gradient_transformation", false]], "axisymmetric_element_gradient_transformation() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.axisymmetric_element_gradient_transformation", false]], "axisymmetric_gradient() (in module optimism.mechanics)": [[2, "optimism.Mechanics.axisymmetric_gradient", false]], "axisymmetric_gradient() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.axisymmetric_gradient", false]], "axisymmpatchtest (class in optimism.test.test_axisymmpatchtest)": [[9, "optimism.test.test_AxisymmPatchTest.AxisymmPatchTest", false]], "basefilename (optimism.test.test_vtkwriter.testvtkwriter attribute)": [[9, "optimism.test.test_VTKWriter.TestVTKWriter.baseFileName", false]], "basefilename (optimism.test.test_vtkwriter.testvtkwriterhigherorder attribute)": [[9, "optimism.test.test_VTKWriter.TestVTKWriterHigherOrder.baseFileName", false]], "bc_data (optimism.objective.params attribute)": [[2, "optimism.Objective.Params.bc_data", false]], "bcindices (optimism.functionspace.dofmanager attribute)": [[2, "optimism.FunctionSpace.DofManager.bcIndices", false]], "beta (optimism.mechanics.newmarkparameters attribute)": [[2, "optimism.Mechanics.NewmarkParameters.beta", false]], "bisection_step() (in module optimism.scalarrootfind)": [[2, "optimism.ScalarRootFind.bisection_step", false]], "bit (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.BIT", false]], "blocks (optimism.mesh.mesh attribute)": [[2, "id14", false], [2, "optimism.Mesh.Mesh.blocks", false]], "bound_constrained_solve() (in module optimism.boundconstrainedsolver)": [[2, "optimism.BoundConstrainedSolver.bound_constrained_solve", false]], "bound_constrained_trust_region_minimize() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.bound_constrained_trust_region_minimize", false]], "boundconstrainedobjective (class in optimism.boundconstrainedobjective)": [[2, "optimism.BoundConstrainedObjective.BoundConstrainedObjective", false]], "cauchy_point_decrease_tol (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.cauchy_point_decrease_tol", false]], "cauchy_point_max_line_search_iters (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.cauchy_point_max_line_search_iters", false]], "cauchy_point_sufficient_decrease_factor (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.cauchy_point_sufficient_decrease_factor", false]], "cg_inexact_solve_ratio (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.cg_inexact_solve_ratio", false]], "cg_inner_products_preconditioned() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.cg_inner_products_preconditioned", false]], "cg_inner_products_unpreconditioned() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.cg_inner_products_unpreconditioned", false]], "cg_tol (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.cg_tol", false]], "char (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.CHAR", false]], "check_quadratic() (optimism.contact.test.test_newtonglobalization.testquadraticsolver method)": [[4, "optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver.check_quadratic", false]], "check_stability (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.check_stability", false]], "check_stability (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.check_stability", false]], "check_stability() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.check_stability", false]], "check_stability() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.check_stability", false]], "combine_blocks() (in module optimism.mesh)": [[2, "optimism.Mesh.combine_blocks", false]], "combine_mesh() (in module optimism.mesh)": [[2, "optimism.Mesh.combine_mesh", false]], "combine_nodesets() (in module optimism.mesh)": [[2, "optimism.Mesh.combine_nodesets", false]], "combine_sidesets() (in module optimism.mesh)": [[2, "optimism.Mesh.combine_sidesets", false]], "combined() (in module optimism.contact.levelset)": [[3, "optimism.contact.Levelset.combined", false]], "component (optimism.functionspace.essentialbc attribute)": [[2, "optimism.FunctionSpace.EssentialBC.component", false]], "compute_algorithmic_energy (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_algorithmic_energy", false]], "compute_average_normal() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.compute_average_normal", false]], "compute_block_diagonal_element_stiffnesses (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_block_diagonal_element_stiffnesses", false]], "compute_closest_distance_to_each_side() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_closest_distance_to_each_side", false]], "compute_closest_distance_to_each_side_smooth() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_closest_distance_to_each_side_smooth", false]], "compute_closest_edges_and_field_weights() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_closest_edges_and_field_weights", false]], "compute_constraint_hessian (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_constraint_hessian", false]], "compute_contact_point_coordinates() (in module optimism.contact.levelsetconstraint)": [[3, "optimism.contact.LevelsetConstraint.compute_contact_point_coordinates", false]], "compute_contact_point_coords_on_edge() (in module optimism.contact.levelsetconstraint)": [[3, "optimism.contact.LevelsetConstraint.compute_contact_point_coords_on_edge", false]], "compute_edge_levelset_constraints() (in module optimism.contact.levelsetconstraint)": [[3, "optimism.contact.LevelsetConstraint.compute_edge_levelset_constraints", false]], "compute_edge_penalty_contact_energy() (in module optimism.contact.penaltycontact)": [[3, "optimism.contact.PenaltyContact.compute_edge_penalty_contact_energy", false]], "compute_edge_vectors() (in module optimism.mesh)": [[2, "optimism.Mesh.compute_edge_vectors", false]], "compute_edge_vectors() (in module optimism.surface)": [[2, "optimism.Surface.compute_edge_vectors", false]], "compute_elastic_linear_strain() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_elastic_linear_strain", false]], "compute_elastic_linear_strain() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.compute_elastic_linear_strain", false]], "compute_elastic_logarithmic_strain() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_elastic_logarithmic_strain", false]], "compute_elastic_logarithmic_strain() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.compute_elastic_logarithmic_strain", false]], "compute_elastic_seth_hill_strain() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_elastic_seth_hill_strain", false]], "compute_elastic_strain() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.compute_elastic_strain", false]], "compute_element_energy() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.compute_element_energy", false]], "compute_element_field_gradient() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.compute_element_field_gradient", false]], "compute_element_hessians (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_element_hessians", false]], "compute_element_masses (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_element_masses", false]], "compute_element_stiffness_from_global_fields() (in module optimism.mechanics)": [[2, "optimism.Mechanics.compute_element_stiffness_from_global_fields", false]], "compute_element_stiffness_from_global_fields() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.compute_element_stiffness_from_global_fields", false]], "compute_element_stiffnesses (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.compute_element_stiffnesses", false]], "compute_element_stiffnesses (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_element_stiffnesses", false]], "compute_element_volumes() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.compute_element_volumes", false]], "compute_element_volumes_axisymmetric() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.compute_element_volumes_axisymmetric", false]], "compute_energy_density (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel.compute_energy_density", false]], "compute_energy_density (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel.compute_energy_density", false]], "compute_error() (in module optimism.contact.test.test_mortargeom)": [[4, "optimism.contact.test.test_MortarGeom.compute_error", false]], "compute_field_gradient() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.compute_field_gradient", false]], "compute_fisher_burmeister_linearization() (in module optimism.contact.penaltycontact)": [[3, "optimism.contact.PenaltyContact.compute_fisher_burmeister_linearization", false]], "compute_flow_direction() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.compute_flow_direction", false]], "compute_flow_direction() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_flow_direction", false]], "compute_flow_stress (optimism.material.hardening.hardeningmodel attribute)": [[5, "optimism.material.Hardening.HardeningModel.compute_flow_stress", false]], "compute_free_energy_density() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.compute_free_energy_density", false]], "compute_friction_energy_from_perp_slip() (in module optimism.contact.friction)": [[3, "optimism.contact.Friction.compute_friction_energy_from_perp_slip", false]], "compute_friction_potential() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_friction_potential", false]], "compute_friction_potential() (in module optimism.contact.levelsetconstraint)": [[3, "optimism.contact.LevelsetConstraint.compute_friction_potential", false]], "compute_friction_potential_on_edge() (in module optimism.contact.levelsetconstraint)": [[3, "optimism.contact.LevelsetConstraint.compute_friction_potential_on_edge", false]], "compute_grid_field() (in module optimism.contact.test.test_cpp)": [[4, "optimism.contact.test.test_Cpp.compute_grid_field", false]], "compute_hardening_energy_density (optimism.material.hardening.hardeningmodel attribute)": [[5, "optimism.material.Hardening.HardeningModel.compute_hardening_energy_density", false]], "compute_initial_state (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel.compute_initial_state", false]], "compute_initial_state (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_initial_state", false]], "compute_initial_state (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.compute_initial_state", false]], "compute_initial_state (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_initial_state", false]], "compute_initial_state (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel.compute_initial_state", false]], "compute_internal_energy (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_internal_energy", false]], "compute_intersection() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.compute_intersection", false]], "compute_levelset_constraints() (in module optimism.contact.levelsetconstraint)": [[3, "optimism.contact.LevelsetConstraint.compute_levelset_constraints", false]], "compute_linear_strain() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.compute_linear_strain", false]], "compute_logarithmic_elastic_strain() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.compute_logarithmic_elastic_strain", false]], "compute_logarithmic_strain() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.compute_logarithmic_strain", false]], "compute_material_qoi (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel.compute_material_qoi", false]], "compute_min_p() (in module optimism.newtonsolver)": [[2, "optimism.NewtonSolver.compute_min_p", false]], "compute_newmark_lagrangian() (in module optimism.mechanics)": [[2, "optimism.Mechanics.compute_newmark_lagrangian", false]], "compute_normal() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.compute_normal", false]], "compute_normal() (in module optimism.surface)": [[2, "optimism.Surface.compute_normal", false]], "compute_normal_from_a() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.compute_normal_from_a", false]], "compute_output_energy_densities_and_fluxes (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_output_energy_densities_and_fluxes", false]], "compute_output_energy_densities_and_stresses (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_output_energy_densities_and_stresses", false]], "compute_output_energy_densities_and_stresses (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.compute_output_energy_densities_and_stresses", false]], "compute_output_energy_density (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel.compute_output_energy_density", false]], "compute_output_kinetic_energy (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_output_kinetic_energy", false]], "compute_output_material_qoi (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.compute_output_material_qoi", false]], "compute_output_strain_energy (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_output_strain_energy", false]], "compute_overstress (optimism.material.hardening.ratesensitivitymodel attribute)": [[5, "optimism.material.Hardening.RateSensitivityModel.compute_overstress", false]], "compute_phase_field_constraint_hessian() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.compute_phase_field_constraint_hessian", false]], "compute_phase_potential_density (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel.compute_phase_potential_density", false]], "compute_phase_potential_energy (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_phase_potential_energy", false]], "compute_potential (optimism.material.hardening.ratesensitivitymodel attribute)": [[5, "optimism.material.Hardening.RateSensitivityModel.compute_potential", false]], "compute_projection_dists() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_projection_dists", false]], "compute_projection_dists_smooth() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_projection_dists_smooth", false]], "compute_q_coordinates() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_q_coordinates", false]], "compute_q_coordinates_from_field_weights() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.compute_q_coordinates_from_field_weights", false]], "compute_quadrature_point_field_gradient() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.compute_quadrature_point_field_gradient", false]], "compute_ray_trace() (optimism.contact.test.test_edgeintersection.testedgeintersection method)": [[4, "optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection.compute_ray_trace", false]], "compute_ray_trace_distance_and_location() (in module optimism.contact.edgeintersection)": [[3, "optimism.contact.EdgeIntersection.compute_ray_trace_distance_and_location", false]], "compute_residual_norm() (in module optimism.test.meshfixture)": [[9, "optimism.test.MeshFixture.compute_residual_norm", false]], "compute_shapes() (in module optimism.interpolants)": [[2, "optimism.Interpolants.compute_shapes", false]], "compute_smoothing_function() (in module optimism.contact.edgeintersection)": [[3, "optimism.contact.EdgeIntersection.compute_smoothing_function", false]], "compute_state_increment() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.compute_state_increment", false]], "compute_state_increment() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_state_increment", false]], "compute_state_increment() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.compute_state_increment", false]], "compute_state_increment() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.compute_state_increment", false]], "compute_state_new (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel.compute_state_new", false]], "compute_state_new (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel.compute_state_new", false]], "compute_state_new() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.compute_state_new", false]], "compute_state_new() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic.compute_state_new", false]], "compute_state_new() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.compute_state_new", false]], "compute_state_new_finite_deformations() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_state_new_finite_deformations", false]], "compute_state_new_finite_deformations() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.compute_state_new_finite_deformations", false]], "compute_state_new_seth_hill() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_state_new_seth_hill", false]], "compute_state_new_small_deformations() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.compute_state_new_small_deformations", false]], "compute_state_new_small_deformations() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.compute_state_new_small_deformations", false]], "compute_strain_energy (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.compute_strain_energy", false]], "compute_strain_energy_densities (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_strain_energy_densities", false]], "compute_strain_energy_density (optimism.phasefield.phasefieldmaterialmodel.materialmodel attribute)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel.compute_strain_energy_density", false]], "compute_total_energy() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.compute_total_energy", false]], "compute_total_penalty_contact_energy() (in module optimism.contact.penaltycontact)": [[3, "optimism.contact.PenaltyContact.compute_total_penalty_contact_energy", false]], "compute_traction_potential_energy() (in module optimism.mechanics)": [[2, "optimism.Mechanics.compute_traction_potential_energy", false]], "compute_traction_potential_energy() (in module optimism.test.test_readmesh)": [[9, "optimism.test.test_ReadMesh.compute_traction_potential_energy", false]], "compute_traction_potential_energy_on_edge() (in module optimism.test.test_readmesh)": [[9, "optimism.test.test_ReadMesh.compute_traction_potential_energy_on_edge", false]], "compute_updated_internal_variables (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.compute_updated_internal_variables", false]], "compute_updated_internal_variables (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.compute_updated_internal_variables", false]], "compute_updated_internal_variables (optimism.phasefield.phasefield.phasefieldfunctions attribute)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions.compute_updated_internal_variables", false]], "compute_valid_ray_trace_distance() (in module optimism.contact.edgeintersection)": [[3, "optimism.contact.EdgeIntersection.compute_valid_ray_trace_distance", false]], "compute_valid_ray_trace_distance_smoothed() (in module optimism.contact.edgeintersection)": [[3, "optimism.contact.EdgeIntersection.compute_valid_ray_trace_distance_smoothed", false]], "conns (optimism.mesh.mesh attribute)": [[2, "id15", false], [2, "optimism.Mesh.Mesh.conns", false]], "constant_body_force_potential() (optimism.test.test_newmark.dynamicsfixture method)": [[9, "optimism.test.test_Newmark.DynamicsFixture.constant_body_force_potential", false]], "constrained_jacobian_p_vec() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.constrained_jacobian_p_vec", false]], "constrained_jacobian_vec() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.constrained_jacobian_vec", false]], "constrained_residual() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.constrained_residual", false]], "constrainedobjective (class in optimism.constrainedobjective)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective", false]], "constrainedquasiobjective (class in optimism.constrainedobjective)": [[2, "optimism.ConstrainedObjective.ConstrainedQuasiObjective", false]], "constraint() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.constraint", false]], "constraint() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.constraint", false]], "construct_basis_on_poly() (in module optimism.test.test_patchtestpou)": [[9, "optimism.test.test_PatchTestPou.construct_basis_on_poly", false]], "construct_edge_neighbor_map() (in module optimism.contact.search)": [[3, "optimism.contact.Search.construct_edge_neighbor_map", false]], "construct_function_space() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.construct_function_space", false]], "construct_function_space_from_parent_element() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.construct_function_space_from_parent_element", false]], "construct_mesh_from_basic_data() (in module optimism.mesh)": [[2, "optimism.Mesh.construct_mesh_from_basic_data", false]], "construct_quadratic() (in module optimism.newtonsolver)": [[2, "optimism.NewtonSolver.construct_quadratic", false]], "construct_structured_mesh() (in module optimism.mesh)": [[2, "optimism.Mesh.construct_structured_mesh", false]], "construct_weighted_function_space() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.construct_weighted_function_space", false]], "converged (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo.converged", false]], "coordinates (optimism.interpolants.parentelement attribute)": [[2, "id6", false], [2, "optimism.Interpolants.ParentElement.coordinates", false]], "coords (optimism.mesh.mesh attribute)": [[2, "id16", false], [2, "optimism.Mesh.Mesh.coords", false]], "corner() (in module optimism.contact.levelset)": [[3, "optimism.contact.Levelset.corner", false]], "correct (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.correct", false]], "correction_norm (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo.correction_norm", false]], "cos_of_acos_divided_by_3() (in module optimism.tensormath)": [[2, "optimism.TensorMath.cos_of_acos_divided_by_3", false]], "cpp() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.cpp", false]], "cpp_distance() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.cpp_distance", false]], "cpp_line() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.cpp_line", false]], "create_arch_mesh_disp_and_edges() (optimism.test.meshfixture.meshfixture method)": [[9, "optimism.test.MeshFixture.MeshFixture.create_arch_mesh_disp_and_edges", false]], "create_augmented_lagrangian() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.create_augmented_lagrangian", false]], "create_augmented_lagrangian() (optimism.constrainedobjective.constrainedquasiobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedQuasiObjective.create_augmented_lagrangian", false]], "create_cos_mesh_disp_and_edges() (optimism.test.meshfixture.meshfixture method)": [[9, "optimism.test.MeshFixture.MeshFixture.create_cos_mesh_disp_and_edges", false]], "create_dynamics_functions() (in module optimism.mechanics)": [[2, "optimism.Mechanics.create_dynamics_functions", false]], "create_edges() (in module optimism.mesh)": [[2, "optimism.Mesh.create_edges", false]], "create_edges() (in module optimism.surface)": [[2, "optimism.Surface.create_edges", false]], "create_field() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager.create_field", false]], "create_field() (optimism.test.test_newmark.dynamicsfixture method)": [[9, "optimism.test.test_Newmark.DynamicsFixture.create_field", false]], "create_graph() (in module optimism.test.test_patchtestpou)": [[9, "optimism.test.test_PatchTestPou.create_graph", false]], "create_hardening_model() (in module optimism.material.hardening)": [[5, "optimism.material.Hardening.create_hardening_model", false]], "create_higher_order_mesh_from_simplex_mesh() (in module optimism.mesh)": [[2, "optimism.Mesh.create_higher_order_mesh_from_simplex_mesh", false]], "create_linear_op() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.create_linear_op", false]], "create_material_functions() (in module optimism.material.gent)": [[5, "optimism.material.Gent.create_material_functions", false]], "create_material_model_functions() (in module optimism.material.hyperviscoelastic)": [[5, "optimism.material.HyperViscoelastic.create_material_model_functions", false]], "create_material_model_functions() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.create_material_model_functions", false]], "create_material_model_functions() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic.create_material_model_functions", false]], "create_material_model_functions() (in module optimism.material.neohookean)": [[5, "optimism.material.Neohookean.create_material_model_functions", false]], "create_material_model_functions() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.create_material_model_functions", false]], "create_material_model_functions() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.create_material_model_functions", false]], "create_mechanics_functions() (in module optimism.mechanics)": [[2, "optimism.Mechanics.create_mechanics_functions", false]], "create_mesh_and_disp() (optimism.test.meshfixture.meshfixture method)": [[9, "optimism.test.MeshFixture.MeshFixture.create_mesh_and_disp", false]], "create_multi_block_mechanics_functions() (in module optimism.mechanics)": [[2, "optimism.Mechanics.create_multi_block_mechanics_functions", false]], "create_nodesets_from_sidesets() (in module optimism.mesh)": [[2, "optimism.Mesh.create_nodesets_from_sidesets", false]], "create_padded_quadrature_rule_1d() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule.create_padded_quadrature_rule_1D", false]], "create_partitions() (in module optimism.test.test_patchtestpou)": [[9, "optimism.test.test_PatchTestPou.create_partitions", false]], "create_phasefield_functions() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.create_phasefield_functions", false]], "create_polys() (optimism.test.test_patchtestpou.patchtestquadraticelements method)": [[9, "optimism.test.test_PatchTestPou.PatchTestQuadraticElements.create_polys", false]], "create_quadrature_rule_1d() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule.create_quadrature_rule_1D", false]], "create_quadrature_rule_on_triangle() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule.create_quadrature_rule_on_triangle", false]], "create_structured_mesh_data() (in module optimism.mesh)": [[2, "optimism.Mesh.create_structured_mesh_data", false]], "cross() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.cross", false]], "cross2() (in module optimism.contact.edgeintersection)": [[3, "optimism.contact.EdgeIntersection.cross2", false]], "data (optimism.vtkwriter.vtkwriter.vtkfieldrecord attribute)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord.data", false]], "datatype (optimism.vtkwriter.vtkwriter.vtkfieldrecord attribute)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord.dataType", false]], "dconstraint() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.dConstraint", false]], "debug_info (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.debug_info", false]], "debug_info (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.debug_info", false]], "default_modify_element_gradient() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.default_modify_element_gradient", false]], "default_values() (in module optimism.vtkwriter)": [[2, "optimism.VTKWriter.default_values", false]], "define_pressure_projection_gradient_tranformation() (in module optimism.mechanics)": [[2, "optimism.Mechanics.define_pressure_projection_gradient_tranformation", false]], "degradation() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.degradation", false]], "degradation() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.degradation", false]], "degradation() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.degradation", false]], "degree (optimism.interpolants.parentelement attribute)": [[2, "id7", false], [2, "optimism.Interpolants.ParentElement.degree", false]], "density (optimism.material.materialmodel.materialmodel attribute)": [[5, "optimism.material.MaterialModel.MaterialModel.density", false]], "design_data (optimism.objective.params attribute)": [[2, "optimism.Objective.Params.design_data", false]], "det() (in module optimism.tensormath)": [[2, "optimism.TensorMath.det", false]], "detpim1() (in module optimism.tensormath)": [[2, "optimism.TensorMath.detpIm1", false]], "dev() (in module optimism.tensormath)": [[2, "optimism.TensorMath.dev", false]], "deviator() (in module optimism.tensormath)": [[2, "optimism.TensorMath.deviator", false]], "df() (in module optimism.test.test_minimizescalar)": [[9, "optimism.test.test_MinimizeScalar.df", false]], "disable_test_edge_conn() (optimism.test.test_surface.testsinglemeshfixture method)": [[9, "optimism.test.test_Surface.TestSingleMeshFixture.disable_test_edge_conn", false]], "dobjective() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.dObjective", false]], "dofmanager (class in optimism.functionspace)": [[2, "optimism.FunctionSpace.DofManager", false]], "dofmanagertest (class in optimism.test.test_dofmanager)": [[9, "optimism.test.test_DofManager.DofManagerTest", false]], "doftounknown (optimism.functionspace.dofmanager attribute)": [[2, "optimism.FunctionSpace.DofManager.dofToUnknown", false]], "dogleg_step() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.dogleg_step", false]], "dot() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.dot", false]], "dot() (optimism.lu.lu method)": [[2, "optimism.LU.LU.dot", false]], "dot2() (in module optimism.contact.edgeintersection)": [[3, "optimism.contact.EdgeIntersection.dot2", false]], "dot2() (in module optimism.math)": [[2, "optimism.Math.dot2", false]], "double (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.DOUBLE", false]], "dr() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.dr", false]], "dr() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.dr", false]], "dr_dstrain_and_deqps() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.dr_dstrain_and_deqps", false]], "dr_dstrain_and_deqps() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.dr_dstrain_and_deqps", false]], "dynamic_data (optimism.objective.params attribute)": [[2, "optimism.Objective.Params.dynamic_data", false]], "dynamicpatchtest (class in optimism.test.test_newmark)": [[9, "optimism.test.test_Newmark.DynamicPatchTest", false]], "dynamicsfixture (class in optimism.test.test_newmark)": [[9, "optimism.test.test_Newmark.DynamicsFixture", false]], "dynamicsfunctions (class in optimism.mechanics)": [[2, "optimism.Mechanics.DynamicsFunctions", false]], "e (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties.E", false]], "e (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.E", false]], "edges_from_points() (in module optimism.contact.test.test_cpp)": [[4, "optimism.contact.test.test_Cpp.edges_from_points", false]], "eigen_sym33_non_unit() (in module optimism.tensormath)": [[2, "optimism.TensorMath.eigen_sym33_non_unit", false]], "eigen_sym33_unit() (in module optimism.tensormath)": [[2, "optimism.TensorMath.eigen_sym33_unit", false]], "elastic_deviatoric_free_energy() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.elastic_deviatoric_free_energy", false]], "elastic_deviatoric_free_energy() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.elastic_deviatoric_free_energy", false]], "elastic_deviatoric_free_energy() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.elastic_deviatoric_free_energy", false]], "elastic_deviatoric_free_energy() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.elastic_deviatoric_free_energy", false]], "elastic_deviatoric_free_energy() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.elastic_deviatoric_free_energy", false]], "elastic_free_energy() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.elastic_free_energy", false]], "elastic_free_energy() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.elastic_free_energy", false]], "elastic_volumetric_free_energy() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.elastic_volumetric_free_energy", false]], "elastic_volumetric_free_energy() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.elastic_volumetric_free_energy", false]], "elastic_volumetric_free_energy() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.elastic_volumetric_free_energy", false]], "elastic_volumetric_free_energy() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.elastic_volumetric_free_energy", false]], "elastic_volumetric_free_energy() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.elastic_volumetric_free_energy", false]], "elementtype (optimism.interpolants.parentelement attribute)": [[2, "id8", false], [2, "optimism.Interpolants.ParentElement.elementType", false]], "endpoints (optimism.test.test_quadraturerule.testquadraturerules attribute)": [[9, "optimism.test.test_QuadratureRule.TestQuadratureRules.endpoints", false]], "energy() (in module optimism.test.test_equationsolver)": [[9, "optimism.test.test_EquationSolver.energy", false]], "energy() (in module optimism.test.test_trustregionspg)": [[9, "optimism.test.test_TrustRegionSPG.energy", false]], "energy_density() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.energy_density", false]], "energy_density() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.energy_density", false]], "energy_density() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.energy_density", false]], "energy_density() (in module optimism.phasefield.test.test_phasefielduniaxial)": [[8, "optimism.phasefield.test.test_PhaseFieldUniaxial.energy_density", false]], "energy_density_generic() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.energy_density_generic", false]], "energy_density_generic() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.energy_density_generic", false]], "energy_density_generic() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.energy_density_generic", false]], "energy_density_to_lagrangian_density() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.energy_density_to_lagrangian_density", false]], "energyhistory (optimism.material.materialuniaxialsimulator.uniaxialoutput attribute)": [[5, "id0", false], [5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput.energyHistory", false]], "energyhistory (optimism.phasefield.materialpointsimulator.uniaxialoutput attribute)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput.energyHistory", false]], "equationsolverfixture (class in optimism.test.test_equationsolver)": [[9, "optimism.test.test_EquationSolver.EquationSolverFixture", false]], "essentialbc (class in optimism.functionspace)": [[2, "optimism.FunctionSpace.EssentialBC", false]], "eta1 (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.eta1", false]], "eta1 (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.eta1", false]], "eta2 (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.eta2", false]], "eta2 (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.eta2", false]], "eta3 (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.eta3", false]], "eta3 (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.eta3", false]], "eval_at_iso_points() (in module optimism.quadraturerule)": [[2, "optimism.QuadratureRule.eval_at_iso_points", false]], "eval_field() (in module optimism.surface)": [[2, "optimism.Surface.eval_field", false]], "eval_linear_field_on_edge() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.eval_linear_field_on_edge", false]], "evaluate_contact_constraints() (in module optimism.contact.penaltycontact)": [[3, "optimism.contact.PenaltyContact.evaluate_contact_constraints", false]], "evaluate_levelset_on_edge() (in module optimism.contact.penaltycontact)": [[3, "optimism.contact.PenaltyContact.evaluate_levelset_on_edge", false]], "evaluate_on_block() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.evaluate_on_block", false]], "evaluate_on_element() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.evaluate_on_element", false]], "f() (in module optimism.test.convexityplot)": [[9, "optimism.test.ConvexityPlot.f", false]], "f() (in module optimism.test.test_minimizescalar)": [[9, "optimism.test.test_MinimizeScalar.f", false]], "f() (in module optimism.test.test_scalarrootfinder)": [[9, "optimism.test.test_ScalarRootFinder.f", false]], "facenodes (optimism.interpolants.parentelement attribute)": [[2, "id9", false], [2, "optimism.Interpolants.ParentElement.faceNodes", false]], "factorize() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.factorize", false]], "fieldshape (optimism.functionspace.dofmanager attribute)": [[2, "optimism.FunctionSpace.DofManager.fieldShape", false]], "fieldtype (optimism.vtkwriter.vtkwriter.vtkfieldrecord attribute)": [[2, "optimism.VTKWriter.VTKWriter.VTKFieldRecord.fieldType", false]], "find_generalized_cauchy_point() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.find_generalized_cauchy_point", false]], "find_root() (in module optimism.scalarrootfind)": [[2, "optimism.ScalarRootFind.find_root", false]], "fischer_burmeister() (in module optimism.constrainedobjective)": [[2, "optimism.ConstrainedObjective.fischer_burmeister", false]], "fischer_burmeister() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.fischer_burmeister", false]], "fischer_burmeister_jac_l() (in module optimism.constrainedobjective)": [[2, "optimism.ConstrainedObjective.fischer_burmeister_jac_l", false]], "float (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.FLOAT", false]], "flow_stress() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.flow_stress", false]], "function_calls (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo.function_calls", false]], "functionspace (class in optimism.functionspace)": [[2, "optimism.FunctionSpace.FunctionSpace", false]], "gamma (optimism.mechanics.newmarkparameters attribute)": [[2, "optimism.Mechanics.NewmarkParameters.gamma", false]], "gc (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties.Gc", false]], "gc (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.Gc", false]], "generate_n_random_symmetric_matrices() (in module optimism.test.test_linalg)": [[9, "optimism.test.test_LinAlg.generate_n_random_symmetric_matrices", false]], "generate_random_points_in_triangle() (in module optimism.test.test_interpolants)": [[9, "optimism.test.test_Interpolants.generate_random_points_in_triangle", false]], "get_bc_size() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager.get_bc_size", false]], "get_bc_values() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager.get_bc_values", false]], "get_best_neighbor() (in module optimism.contact.search)": [[3, "optimism.contact.Search.get_best_neighbor", false]], "get_best_neighbors() (in module optimism.contact.search)": [[3, "optimism.contact.Search.get_best_neighbors", false]], "get_best_overlap_vector() (in module optimism.contact.test.test_search)": [[4, "optimism.contact.test.test_Search.get_best_overlap_vector", false]], "get_best_overlap_vector() (in module optimism.contact.test.test_twobodycontact)": [[4, "optimism.contact.test.test_TwoBodyContact.get_best_overlap_vector", false]], "get_blocks() (in module optimism.mesh)": [[2, "optimism.Mesh.get_blocks", false]], "get_closest_distance() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.get_closest_distance", false]], "get_closest_distance_smooth() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.get_closest_distance_smooth", false]], "get_closest_neighbors() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.get_closest_neighbors", false]], "get_closest_two_edges() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.get_closest_two_edges", false]], "get_coords() (in module optimism.surface)": [[2, "optimism.Surface.get_coords", false]], "get_coords_and_distances() (in module optimism.contact.search)": [[3, "optimism.contact.Search.get_coords_and_distances", false]], "get_current_coordinates_at_quadrature_points() (in module optimism.contact.penaltycontact)": [[3, "optimism.contact.PenaltyContact.get_current_coordinates_at_quadrature_points", false]], "get_diagonal_stiffness() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.get_diagonal_stiffness", false]], "get_edge() (optimism.contact.test.test_edgeintersection.testedgeintersection method)": [[4, "optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection.get_edge", false]], "get_edge_coords() (in module optimism.mesh)": [[2, "optimism.Mesh.get_edge_coords", false]], "get_edge_field() (in module optimism.mesh)": [[2, "optimism.Mesh.get_edge_field", false]], "get_edge_node_indices() (in module optimism.mesh)": [[2, "optimism.Mesh.get_edge_node_indices", false]], "get_facet_connectivities() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.get_facet_connectivities", false]], "get_field_index() (in module optimism.surface)": [[2, "optimism.Surface.get_field_index", false]], "get_lobatto_nodes_1d() (in module optimism.interpolants)": [[2, "optimism.Interpolants.get_lobatto_nodes_1d", false]], "get_multipliers() (optimism.boundconstrainedobjective.boundconstrainedobjective method)": [[2, "optimism.BoundConstrainedObjective.BoundConstrainedObjective.get_multipliers", false]], "get_nodal_values_on_edge() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.get_nodal_values_on_edge", false]], "get_potential_interaction_list() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.get_potential_interaction_list", false]], "get_ray() (optimism.contact.test.test_edgeintersection.testedgeintersection method)": [[4, "optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection.get_ray", false]], "get_ray_length_arg_x() (optimism.contact.test.test_edgeintersection.testedgeintersection method)": [[4, "optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection.get_ray_length_arg_x", false]], "get_ray_length_arg_y() (optimism.contact.test.test_edgeintersection.testedgeintersection method)": [[4, "optimism.contact.test.test_EdgeIntersection.TestEdgeIntersection.get_ray_length_arg_y", false]], "get_residual() (optimism.boundconstrainedobjective.boundconstrainedobjective method)": [[2, "optimism.BoundConstrainedObjective.BoundConstrainedObjective.get_residual", false]], "get_residual() (optimism.objective.scaledobjective method)": [[2, "optimism.Objective.ScaledObjective.get_residual", false]], "get_settings() (in module optimism.alsolver)": [[2, "optimism.AlSolver.get_settings", false]], "get_settings() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.get_settings", false]], "get_settings() (in module optimism.minimizescalar)": [[2, "optimism.MinimizeScalar.get_settings", false]], "get_settings() (in module optimism.scalarrootfind)": [[2, "optimism.ScalarRootFind.get_settings", false]], "get_settings() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.get_settings", false]], "get_side_coordinates() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.get_side_coordinates", false]], "get_side_set_segments() (in module optimism.contact.test.test_twobodycontact)": [[4, "optimism.contact.test.test_TwoBodyContact.get_side_set_segments", false]], "get_total_residual() (optimism.boundconstrainedobjective.boundconstrainedobjective method)": [[2, "optimism.BoundConstrainedObjective.BoundConstrainedObjective.get_total_residual", false]], "get_ubcs() (optimism.test.test_newmark.dynamicsfixture method)": [[9, "optimism.test.test_Newmark.DynamicsFixture.get_ubcs", false]], "get_unknown_size() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager.get_unknown_size", false]], "get_unknown_values() (optimism.functionspace.dofmanager method)": [[2, "optimism.FunctionSpace.DofManager.get_unknown_values", false]], "get_value() (optimism.boundconstrainedobjective.boundconstrainedobjective method)": [[2, "optimism.BoundConstrainedObjective.BoundConstrainedObjective.get_value", false]], "get_value() (optimism.objective.scaledobjective method)": [[2, "optimism.Objective.ScaledObjective.get_value", false]], "globalized_newton_step() (in module optimism.newtonsolver)": [[2, "optimism.NewtonSolver.globalized_newton_step", false]], "gradient() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.gradient", false]], "gradient() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.gradient", false]], "gradient_2d_to_axisymmetric() (in module optimism.tensormath)": [[2, "optimism.TensorMath.gradient_2D_to_axisymmetric", false]], "gradient_and_tangent() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.gradient_and_tangent", false]], "gradient_l() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.gradient_l", false]], "gradient_p() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.gradient_p", false]], "gradient_p() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.gradient_p", false]], "gradients (optimism.interpolants.shapefunctions attribute)": [[2, "id12", false], [2, "optimism.Interpolants.ShapeFunctions.gradients", false]], "gradofplasticitymodelfixture (class in optimism.material.test.test_j2plastic)": [[6, "optimism.material.test.test_J2Plastic.GradOfPlasticityModelFixture", false]], "gradofplasticphasefieldmodelfixture (class in optimism.phasefield.test.test_phasefieldlorentzplastic)": [[8, "optimism.phasefield.test.test_PhaseFieldLorentzPlastic.GradOfPlasticPhaseFieldModelFixture", false]], "gradofplasticphasefieldmodelfixture (class in optimism.phasefield.test.test_phasefieldthresholdplastic)": [[8, "optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture", false]], "green_lagrange_strain() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic.green_lagrange_strain", false]], "h (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.H", false]], "hardening_energy_density() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.hardening_energy_density", false]], "hardening_energy_density() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.hardening_energy_density", false]], "hardeningmodel (class in optimism.material.hardening)": [[5, "optimism.material.Hardening.HardeningModel", false]], "hesscolcoords (optimism.functionspace.dofmanager attribute)": [[2, "optimism.FunctionSpace.DofManager.HessColCoords", false]], "hessian() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.hessian", false]], "hessian() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.hessian", false]], "hessian_bc_mask (optimism.functionspace.dofmanager attribute)": [[2, "optimism.FunctionSpace.DofManager.hessian_bc_mask", false]], "hessian_vec() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.hessian_vec", false]], "hessian_vec() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.hessian_vec", false]], "hessrayleigh() (in module optimism.jaxconfig)": [[2, "optimism.JaxConfig.hessrayleigh", false]], "hessrowcoords (optimism.functionspace.dofmanager attribute)": [[2, "optimism.FunctionSpace.DofManager.HessRowCoords", false]], "hessvec() (in module optimism.jaxconfig)": [[2, "optimism.JaxConfig.hessvec", false]], "hyperviscomodelfixture (class in optimism.material.test.test_hypervisco)": [[6, "optimism.material.test.test_HyperVisco.HyperViscoModelFixture", false]], "hyperviscouniaxialstrain (class in optimism.material.test.test_hypervisco)": [[6, "optimism.material.test.test_HyperVisco.HyperViscoUniaxialStrain", false]], "i2() (in module optimism.tensormath)": [[2, "optimism.TensorMath.I2", false]], "ids (optimism.functionspace.dofmanager attribute)": [[2, "optimism.FunctionSpace.DofManager.ids", false]], "if_then_else() (in module optimism.jaxconfig)": [[2, "optimism.JaxConfig.if_then_else", false]], "incremental_potential() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.incremental_potential", false]], "incremental_potential() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.incremental_potential", false]], "incremental_potential() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.incremental_potential", false]], "incremental_potential() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.incremental_potential", false]], "initial_state() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.initial_state", false]], "initialize() (optimism.boundconstrainedobjective.scaledprecondstrategy method)": [[2, "optimism.BoundConstrainedObjective.ScaledPrecondStrategy.initialize", false]], "initialize() (optimism.constrainedobjective.precondstrategy method)": [[2, "optimism.ConstrainedObjective.PrecondStrategy.initialize", false]], "initialize() (optimism.objective.precondstrategy method)": [[2, "optimism.Objective.PrecondStrategy.initialize", false]], "initialize() (optimism.objective.scaledprecondstrategy method)": [[2, "optimism.Objective.ScaledPrecondStrategy.initialize", false]], "initialize() (optimism.objective.twotryprecondstrategy method)": [[2, "optimism.Objective.TwoTryPrecondStrategy.initialize", false]], "insort() (in module optimism.test.test_patchtestpou)": [[9, "optimism.test.test_PatchTestPou.insort", false]], "int (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.INT", false]], "integrate_2d_monomial_on_triangle() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.integrate_2D_monomial_on_triangle", false]], "integrate_element() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.integrate_element", false]], "integrate_element_from_local_field() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.integrate_element_from_local_field", false]], "integrate_function() (in module optimism.surface)": [[2, "optimism.Surface.integrate_function", false]], "integrate_function_on_edge() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.integrate_function_on_edge", false]], "integrate_function_on_edge() (in module optimism.surface)": [[2, "optimism.Surface.integrate_function_on_edge", false]], "integrate_function_on_edges() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.integrate_function_on_edges", false]], "integrate_function_on_surface() (in module optimism.surface)": [[2, "optimism.Surface.integrate_function_on_surface", false]], "integrate_monomial_on_line() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.integrate_monomial_on_line", false]], "integrate_over_block() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.integrate_over_block", false]], "integrate_values() (in module optimism.surface)": [[2, "optimism.Surface.integrate_values", false]], "integrate_with_active_mortar() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.integrate_with_active_mortar", false]], "integrate_with_mortar() (in module optimism.contact.mortarcontact)": [[3, "optimism.contact.MortarContact.integrate_with_mortar", false]], "integrated_material_qoi (optimism.mechanics.mechanicsfunctions attribute)": [[2, "optimism.Mechanics.MechanicsFunctions.integrated_material_qoi", false]], "interiornodes (optimism.interpolants.parentelement attribute)": [[2, "id10", false], [2, "optimism.Interpolants.ParentElement.interiorNodes", false]], "internalvariablehistory (optimism.material.materialuniaxialsimulator.uniaxialoutput attribute)": [[5, "id1", false], [5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput.internalVariableHistory", false]], "internalvariablehistory (optimism.phasefield.materialpointsimulator.uniaxialoutput attribute)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput.internalVariableHistory", false]], "interpolate_element_kinematics() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.interpolate_element_kinematics", false]], "interpolate_kinematics() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.interpolate_kinematics", false]], "interpolate_nodal_field_on_edge() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.interpolate_nodal_field_on_edge", false]], "interpolate_nodal_field_on_edge() (in module optimism.test.test_readmesh)": [[9, "optimism.test.test_ReadMesh.interpolate_nodal_field_on_edge", false]], "interpolate_to_element_points() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.interpolate_to_element_points", false]], "interpolate_to_point() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.interpolate_to_point", false]], "interpolate_to_points() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.interpolate_to_points", false]], "inv() (in module optimism.tensormath)": [[2, "optimism.TensorMath.inv", false]], "inverse_ncp_hessian_bound (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings.inverse_ncp_hessian_bound", false]], "is_contact_edge() (optimism.contact.test.test_search.testdoublemeshfixture method)": [[4, "optimism.contact.test.test_Search.TestDoubleMeshFixture.is_contact_edge", false]], "is_converged() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.is_converged", false]], "is_converged() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.is_converged", false]], "is_initialized() (optimism.equationsolversubspace.modelproblem method)": [[2, "optimism.EquationSolverSubspace.ModelProblem.is_initialized", false]], "is_inside_triangle() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.is_inside_triangle", false]], "is_integration_edge() (optimism.contact.test.test_search.testdoublemeshfixture method)": [[4, "optimism.contact.test.test_Search.TestDoubleMeshFixture.is_integration_edge", false]], "is_on_boundary() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.is_on_boundary", false]], "is_on_boundary() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.is_on_boundary", false]], "isaxisymmetric (optimism.functionspace.functionspace attribute)": [[2, "id0", false], [2, "optimism.FunctionSpace.FunctionSpace.isAxisymmetric", false]], "isbc (optimism.functionspace.dofmanager attribute)": [[2, "optimism.FunctionSpace.DofManager.isBc", false]], "isunknown (optimism.functionspace.dofmanager attribute)": [[2, "optimism.FunctionSpace.DofManager.isUnknown", false]], "iterations (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo.iterations", false]], "j2plasticuniaxial (class in optimism.material.test.test_j2plastic)": [[6, "optimism.material.test.test_J2Plastic.J2PlasticUniaxial", false]], "j2updatefixture (class in optimism.material.test.test_j2plastic)": [[6, "optimism.material.test.test_J2Plastic.J2UpdateFixture", false]], "jacobian_l_vec() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.jacobian_l_vec", false]], "jacobian_p2_vec() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.jacobian_p2_vec", false]], "jacobian_p_vec() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.jacobian_p_vec", false]], "jacobian_p_vec() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.jacobian_p_vec", false]], "jvp_sqrtm() (in module optimism.linalg)": [[2, "optimism.LinAlg.jvp_sqrtm", false]], "kappa (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties.kappa", false]], "kappa (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.kappa", false]], "kinetic_energy_density() (in module optimism.mechanics)": [[2, "optimism.Mechanics.kinetic_energy_density", false]], "kirchhoffstresshistory (optimism.phasefield.materialpointsimulator.uniaxialoutput attribute)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput.kirchhoffStressHistory", false]], "kouri_exact_line_search() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.kouri_exact_line_search", false]], "l (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties.l", false]], "l (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.l", false]], "line_search_backtrack() (in module optimism.minimizescalar)": [[2, "optimism.MinimizeScalar.line_search_backtrack", false]], "line_search_bidirectional() (in module optimism.minimizescalar)": [[2, "optimism.MinimizeScalar.line_search_bidirectional", false]], "line_search_forwardtrack() (in module optimism.minimizescalar)": [[2, "optimism.MinimizeScalar.line_search_forwardtrack", false]], "linear() (in module optimism.material.hardening)": [[5, "optimism.material.Hardening.linear", false]], "linear_op() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.linear_op", false]], "linear_strain() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic.linear_strain", false]], "linear_update() (in module optimism.alsolver)": [[2, "optimism.AlSolver.linear_update", false]], "linearpatchtestlinearelements (class in optimism.test.test_patchtest)": [[9, "optimism.test.test_PatchTest.LinearPatchTestLinearElements", false]], "linearpatchtestquadraticelements (class in optimism.test.test_patchtest)": [[9, "optimism.test.test_PatchTest.LinearPatchTestQuadraticElements", false]], "log_pade_pf() (in module optimism.linalg)": [[2, "optimism.LinAlg.log_pade_pf", false]], "log_sqrt_symm() (in module optimism.tensormath)": [[2, "optimism.TensorMath.log_sqrt_symm", false]], "log_strain() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic.log_strain", false]], "logger() (optimism.timer.timer method)": [[2, "optimism.Timer.Timer.logger", false]], "logm_jvp() (in module optimism.linalg)": [[2, "optimism.LinAlg.logm_jvp", false]], "long (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.LONG", false]], "lu (class in optimism.lu)": [[2, "optimism.LU.LU", false]], "make_disp_grad_from_strain() (in module optimism.material.test.test_j2plastic)": [[6, "optimism.material.test.test_J2Plastic.make_disp_grad_from_strain", false]], "make_high_order_writer_with_fields() (optimism.test.test_vtkwriter.testvtkwriterhigherorder method)": [[9, "optimism.test.test_VTKWriter.TestVTKWriterHigherOrder.make_high_order_writer_with_fields", false]], "make_initial_state() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.make_initial_state", false]], "make_initial_state() (in module optimism.material.gent)": [[5, "optimism.material.Gent.make_initial_state", false]], "make_initial_state() (in module optimism.material.linearelastic)": [[5, "optimism.material.LinearElastic.make_initial_state", false]], "make_initial_state() (in module optimism.material.neohookean)": [[5, "optimism.material.Neohookean.make_initial_state", false]], "make_initial_state() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.make_initial_state", false]], "make_initial_state_finite_deformations() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.make_initial_state_finite_deformations", false]], "make_initial_state_finite_deformations() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.make_initial_state_finite_deformations", false]], "make_initial_state_small_deformations() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.make_initial_state_small_deformations", false]], "make_initial_state_small_deformations() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.make_initial_state_small_deformations", false]], "make_parent_element_1d() (in module optimism.interpolants)": [[2, "optimism.Interpolants.make_parent_element_1d", false]], "make_parent_element_2d() (in module optimism.interpolants)": [[2, "optimism.Interpolants.make_parent_element_2d", false]], "make_parent_element_2d_with_bubble() (in module optimism.interpolants)": [[2, "optimism.Interpolants.make_parent_element_2d_with_bubble", false]], "make_parent_elements() (in module optimism.interpolants)": [[2, "optimism.Interpolants.make_parent_elements", false]], "make_properties() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.make_properties", false]], "make_properties() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.make_properties", false]], "make_properties() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.make_properties", false]], "make_properties() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.make_properties", false]], "make_properties() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.make_properties", false]], "makekinematics() (optimism.phasefield.materialpointsimulator.materialpointsimulator static method)": [[7, "optimism.phasefield.MaterialPointSimulator.MaterialPointSimulator.makeKinematics", false]], "makestraintensor_() (in module optimism.material.materialuniaxialsimulator)": [[5, "optimism.material.MaterialUniaxialSimulator.makeStrainTensor_", false]], "map_1d_jac() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.map_1d_jac", false]], "map_affine_1d() (in module optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.map_affine_1D", false]], "map_element_shape_grads() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.map_element_shape_grads", false]], "map_to_arch() (in module optimism.test.meshfixture)": [[9, "optimism.test.MeshFixture.map_to_arch", false]], "map_to_cos() (in module optimism.test.meshfixture)": [[9, "optimism.test.MeshFixture.map_to_cos", false]], "materialmodel (class in optimism.material.materialmodel)": [[5, "optimism.material.MaterialModel.MaterialModel", false]], "materialmodel (class in optimism.phasefield.phasefieldmaterialmodel)": [[7, "optimism.phasefield.PhaseFieldMaterialModel.MaterialModel", false]], "materialpointsimulator (class in optimism.phasefield.materialpointsimulator)": [[7, "optimism.phasefield.MaterialPointSimulator.MaterialPointSimulator", false]], "materialuniaxialsimulatorfixture (class in optimism.material.test.test_materialuniaxialsimulator)": [[6, "optimism.material.test.test_MaterialUniaxialSimulator.MaterialUniaxialSimulatorFixture", false]], "matprops (class in optimism.material.materialmodel)": [[5, "optimism.material.MaterialModel.MatProps", false]], "max() (in module optimism.smoothfunctions)": [[2, "optimism.SmoothFunctions.max", false]], "max_al_iters (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings.max_al_iters", false]], "max_cg_iters (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.max_cg_iters", false]], "max_cumulative_cg_iters (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.max_cumulative_cg_iters", false]], "max_cumulative_spg_iters (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.max_cumulative_spg_iters", false]], "max_degree_1d (optimism.test.test_quadraturerule.testquadraturerules attribute)": [[9, "optimism.test.test_QuadratureRule.TestQuadratureRules.max_degree_1D", false]], "max_degree_2d (optimism.test.test_quadraturerule.testquadraturerules attribute)": [[9, "optimism.test.test_QuadratureRule.TestQuadratureRules.max_degree_2D", false]], "max_gmres_iters (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings.max_gmres_iters", false]], "max_gmres_iters (optimism.newtonsolver.settings attribute)": [[2, "optimism.NewtonSolver.Settings.max_gmres_iters", false]], "max_iters (optimism.minimizescalar.settings attribute)": [[2, "optimism.MinimizeScalar.Settings.max_iters", false]], "max_iters (optimism.scalarrootfind.settings attribute)": [[2, "optimism.ScalarRootFind.Settings.max_iters", false]], "max_spectral_step_length (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.max_spectral_step_length", false]], "max_spg_iters (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.max_spg_iters", false]], "max_trust_iters (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.max_trust_iters", false]], "max_trust_iters (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.max_trust_iters", false]], "mechanicsfunctions (class in optimism.mechanics)": [[2, "optimism.Mechanics.MechanicsFunctions", false]], "mechanicsfunctionsfixture (class in optimism.test.test_mechanics)": [[9, "optimism.test.test_Mechanics.MechanicsFunctionsFixture", false]], "mesh (class in optimism.mesh)": [[2, "optimism.Mesh.Mesh", false]], "mesh (optimism.functionspace.functionspace attribute)": [[2, "id1", false], [2, "optimism.FunctionSpace.FunctionSpace.mesh", false]], "mesh_with_blocks() (in module optimism.mesh)": [[2, "optimism.Mesh.mesh_with_blocks", false]], "mesh_with_coords() (in module optimism.mesh)": [[2, "optimism.Mesh.mesh_with_coords", false]], "mesh_with_nodesets() (in module optimism.mesh)": [[2, "optimism.Mesh.mesh_with_nodesets", false]], "meshfixture (class in optimism.test.meshfixture)": [[9, "optimism.test.MeshFixture.MeshFixture", false]], "min() (in module optimism.smoothfunctions)": [[2, "optimism.SmoothFunctions.min", false]], "min_base() (in module optimism.smoothfunctions)": [[2, "optimism.SmoothFunctions.min_base", false]], "min_dist_squared() (in module optimism.contact.contact)": [[3, "optimism.contact.Contact.min_dist_squared", false]], "min_spectral_step_length (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.min_spectral_step_length", false]], "min_tr_size (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.min_tr_size", false]], "min_tr_size (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.min_tr_size", false]], "minimize_scalar() (in module optimism.minimizescalar)": [[2, "optimism.MinimizeScalar.minimize_scalar", false]], "mises_invariant() (in module optimism.tensormath)": [[2, "optimism.TensorMath.mises_invariant", false]], "modelproblem (class in optimism.equationsolversubspace)": [[2, "optimism.EquationSolverSubspace.ModelProblem", false]], "module": [[2, "module-optimism", false], [2, "module-optimism.AlSolver", false], [2, "module-optimism.BoundConstrainedObjective", false], [2, "module-optimism.BoundConstrainedSolver", false], [2, "module-optimism.ConstrainedObjective", false], [2, "module-optimism.EquationSolver", false], [2, "module-optimism.EquationSolverSubspace", false], [2, "module-optimism.FunctionSpace", false], [2, "module-optimism.Interpolants", false], [2, "module-optimism.J2PlasticPhaseField", false], [2, "module-optimism.JaxConfig", false], [2, "module-optimism.LU", false], [2, "module-optimism.LinAlg", false], [2, "module-optimism.Math", false], [2, "module-optimism.Mechanics", false], [2, "module-optimism.Mesh", false], [2, "module-optimism.MeshPlot", false], [2, "module-optimism.MinimizeScalar", false], [2, "module-optimism.NewtonSolver", false], [2, "module-optimism.Objective", false], [2, "module-optimism.QuadratureRule", false], [2, "module-optimism.ReadExodusMesh", false], [2, "module-optimism.ReadMesh", false], [2, "module-optimism.ScalarRootFind", false], [2, "module-optimism.SmoothFunctions", false], [2, "module-optimism.SparseCholesky", false], [2, "module-optimism.SparseMatrixAssembler", false], [2, "module-optimism.Surface", false], [2, "module-optimism.TensorMath", false], [2, "module-optimism.Timer", false], [2, "module-optimism.TrustRegionSPG", false], [2, "module-optimism.VTKWriter", false], [2, "module-optimism.WarmStart", false], [3, "module-optimism.contact", false], [3, "module-optimism.contact.Contact", false], [3, "module-optimism.contact.EdgeCpp", false], [3, "module-optimism.contact.EdgeIntersection", false], [3, "module-optimism.contact.Friction", false], [3, "module-optimism.contact.Levelset", false], [3, "module-optimism.contact.LevelsetConstraint", false], [3, "module-optimism.contact.MortarContact", false], [3, "module-optimism.contact.PenaltyContact", false], [3, "module-optimism.contact.Search", false], [4, "module-optimism.contact.test", false], [4, "module-optimism.contact.test.test_Contact", false], [4, "module-optimism.contact.test.test_Cpp", false], [4, "module-optimism.contact.test.test_EdgeIntersection", false], [4, "module-optimism.contact.test.test_LevelsetConstraint", false], [4, "module-optimism.contact.test.test_MortarGeom", false], [4, "module-optimism.contact.test.test_NewtonGlobalization", false], [4, "module-optimism.contact.test.test_Search", false], [4, "module-optimism.contact.test.test_TwoBodyContact", false], [4, "module-optimism.contact.test.test_TwoBodyMortarContact", false], [5, "module-optimism.material", false], [5, "module-optimism.material.Gent", false], [5, "module-optimism.material.Hardening", false], [5, "module-optimism.material.HyperViscoelastic", false], [5, "module-optimism.material.J2Plastic", false], [5, "module-optimism.material.LinearElastic", false], [5, "module-optimism.material.MaterialModel", false], [5, "module-optimism.material.MaterialUniaxialSimulator", false], [5, "module-optimism.material.Neohookean", false], [6, "module-optimism.material.test", false], [6, "module-optimism.material.test.test_Gent", false], [6, "module-optimism.material.test.test_Hardening", false], [6, "module-optimism.material.test.test_HyperVisco", false], [6, "module-optimism.material.test.test_J2Plastic", false], [6, "module-optimism.material.test.test_LinearElastic", false], [6, "module-optimism.material.test.test_MaterialUniaxialSimulator", false], [6, "module-optimism.material.test.test_RateSensitivity", false], [7, "module-optimism.phasefield", false], [7, "module-optimism.phasefield.MaterialPointSimulator", false], [7, "module-optimism.phasefield.PhaseField", false], [7, "module-optimism.phasefield.PhaseFieldLorentzPlastic", false], [7, "module-optimism.phasefield.PhaseFieldMaterialModel", false], [7, "module-optimism.phasefield.PhaseFieldThreshold", false], [7, "module-optimism.phasefield.PhaseFieldThresholdPlastic", false], [8, "module-optimism.phasefield.test", false], [8, "module-optimism.phasefield.test.plotPhaseFieldThresholdModel", false], [8, "module-optimism.phasefield.test.test_PhaseFieldLorentzPlastic", false], [8, "module-optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch", false], [8, "module-optimism.phasefield.test.test_PhaseFieldThreshold", false], [8, "module-optimism.phasefield.test.test_PhaseFieldThresholdPatch", false], [8, "module-optimism.phasefield.test.test_PhaseFieldThresholdPlastic", false], [8, "module-optimism.phasefield.test.test_PhaseFieldUniaxial", false], [9, "module-optimism.test", false], [9, "module-optimism.test.ConvexityPlot", false], [9, "module-optimism.test.MeshFixture", false], [9, "module-optimism.test.TestFixture", false], [9, "module-optimism.test.test_AxisymmPatchTest", false], [9, "module-optimism.test.test_DofManager", false], [9, "module-optimism.test.test_EquationSolver", false], [9, "module-optimism.test.test_FunctionSpace", false], [9, "module-optimism.test.test_Interpolants", false], [9, "module-optimism.test.test_JaxConfig", false], [9, "module-optimism.test.test_LinAlg", false], [9, "module-optimism.test.test_Math", false], [9, "module-optimism.test.test_Mechanics", false], [9, "module-optimism.test.test_Mesh", false], [9, "module-optimism.test.test_MinimizeScalar", false], [9, "module-optimism.test.test_Newmark", false], [9, "module-optimism.test.test_Objective", false], [9, "module-optimism.test.test_PatchTest", false], [9, "module-optimism.test.test_PatchTestPou", false], [9, "module-optimism.test.test_QuadratureRule", false], [9, "module-optimism.test.test_ReadExodusMesh", false], [9, "module-optimism.test.test_ReadMesh", false], [9, "module-optimism.test.test_ScalarRootFinder", false], [9, "module-optimism.test.test_SmoothFunctions", false], [9, "module-optimism.test.test_SparseMatrix", false], [9, "module-optimism.test.test_SparsePreconditioner", false], [9, "module-optimism.test.test_Surface", false], [9, "module-optimism.test.test_TensorMath", false], [9, "module-optimism.test.test_Traction", false], [9, "module-optimism.test.test_TrustRegionSPG", false], [9, "module-optimism.test.test_VTKWriter", false], [9, "module-optimism.test.test_VolumeAverageJ", false]], "mu (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties.mu", false]], "mu (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.mu", false]], "multiply_by_approx_hessian() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.multiply_by_approx_hessian", false]], "multiply_by_approximate() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.multiply_by_approximate", false]], "multiply_by_transpose() (optimism.lu.lu method)": [[2, "optimism.LU.LU.multiply_by_transpose", false]], "multiply_by_transpose() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.multiply_by_transpose", false]], "my_func() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.my_func", false]], "name (optimism.timer.timer attribute)": [[2, "optimism.Timer.Timer.name", false]], "ncp() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.ncp", false]], "ncp_hessian() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.ncp_hessian", false]], "newmarkparameters (class in optimism.mechanics)": [[2, "optimism.Mechanics.NewmarkParameters", false]], "newton() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.newton", false]], "newton_solve() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.newton_solve", false]], "newton_step() (in module optimism.newtonsolver)": [[2, "optimism.NewtonSolver.newton_step", false]], "newton_step() (in module optimism.scalarrootfind)": [[2, "optimism.ScalarRootFind.newton_step", false]], "no_test_cgunbound() (optimism.test.test_trustregionspg.testtrustregionspgfixture method)": [[9, "optimism.test.test_TrustRegionSPG.TestTrustRegionSPGFixture.no_test_cgunbound", false]], "no_test_hessian() (optimism.test.test_trustregionspg.testtrustregionspgrosenbrock method)": [[9, "optimism.test.test_TrustRegionSPG.TestTrustRegionSPGRosenbrock.no_test_hessian", false]], "no_test_plastic_strain_path() (optimism.phasefield.test.test_phasefieldthresholdplastic.gradofplasticphasefieldmodelfixture method)": [[8, "optimism.phasefield.test.test_PhaseFieldThresholdPlastic.GradOfPlasticPhaseFieldModelFixture.no_test_plastic_strain_path", false]], "no_test_plot_high_order_nodes() (optimism.test.test_interpolants.testinterpolants method)": [[9, "optimism.test.test_Interpolants.TestInterpolants.no_test_plot_high_order_nodes", false]], "no_test_plot_shape_functions() (optimism.test.test_interpolants.testbubbleinterpolants method)": [[9, "optimism.test.test_Interpolants.TestBubbleInterpolants.no_test_plot_shape_functions", false]], "no_test_steihaug_on_rosenbrock() (optimism.test.test_trustregionspg.testtrustregionspgrosenbrock method)": [[9, "optimism.test.test_TrustRegionSPG.TestTrustRegionSPGRosenbrock.no_test_steihaug_on_rosenbrock", false]], "no_test_trust_region_equation_solver() (optimism.test.test_trustregionspg.trspgcauchypointfixture method)": [[9, "optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture.no_test_trust_region_equation_solver", false]], "no_test_uniaxial() (optimism.phasefield.test.test_phasefieldlorentzplasticpatch.testsinglemeshfixture method)": [[8, "optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch.TestSingleMeshFixture.no_test_uniaxial", false]], "nodeset (optimism.functionspace.essentialbc attribute)": [[2, "optimism.FunctionSpace.EssentialBC.nodeSet", false]], "nodesets (optimism.mesh.mesh attribute)": [[2, "id17", false], [2, "optimism.Mesh.Mesh.nodeSets", false]], "nonlinear_equation_solve() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.nonlinear_equation_solve", false]], "nonmonotone_line_search() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.nonmonotone_line_search", false]], "norm() (in module optimism.tensormath)": [[2, "optimism.TensorMath.norm", false]], "norm_of_deviator() (in module optimism.tensormath)": [[2, "optimism.TensorMath.norm_of_deviator", false]], "norm_of_deviator_squared() (in module optimism.tensormath)": [[2, "optimism.TensorMath.norm_of_deviator_squared", false]], "norm_squared() (in module optimism.contact.edgecpp)": [[3, "optimism.contact.EdgeCpp.norm_squared", false]], "notest_grad() (optimism.test.test_minimizescalar.testminimizescalarfixture method)": [[9, "optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture.notest_grad", false]], "notest_jit() (optimism.test.test_minimizescalar.testminimizescalarfixture method)": [[9, "optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture.notest_jit", false]], "notest_stiff_problem() (optimism.test.test_minimizescalar.testminimizescalarfixture method)": [[9, "optimism.test.test_MinimizeScalar.TestMinimizeScalarFixture.notest_stiff_problem", false]], "nu (optimism.phasefield.phasefieldthreshold.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties.nu", false]], "nu (optimism.phasefield.phasefieldthresholdplastic.properties attribute)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties.nu", false]], "num_elements() (in module optimism.mesh)": [[2, "optimism.Mesh.num_elements", false]], "num_initial_low_order_iterations (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings.num_initial_low_order_iterations", false]], "num_nodes (optimism.interpolants.parentelement property)": [[2, "optimism.Interpolants.ParentElement.num_nodes", false]], "num_nodes() (in module optimism.mesh)": [[2, "optimism.Mesh.num_nodes", false]], "num_props (optimism.material.materialmodel.matprops attribute)": [[5, "optimism.material.MaterialModel.MatProps.num_props", false]], "num_states (optimism.material.materialmodel.matprops attribute)": [[5, "optimism.material.MaterialModel.MatProps.num_states", false]], "numerical_grad() (in module optimism.test.test_tensormath)": [[9, "optimism.test.test_TensorMath.numerical_grad", false]], "objective (class in optimism.objective)": [[2, "optimism.Objective.Objective", false]], "objective() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.objective", false]], "optimism": [[2, "module-optimism", false]], "optimism.alsolver": [[2, "module-optimism.AlSolver", false]], "optimism.boundconstrainedobjective": [[2, "module-optimism.BoundConstrainedObjective", false]], "optimism.boundconstrainedsolver": [[2, "module-optimism.BoundConstrainedSolver", false]], "optimism.constrainedobjective": [[2, "module-optimism.ConstrainedObjective", false]], "optimism.contact": [[3, "module-optimism.contact", false]], "optimism.contact.contact": [[3, "module-optimism.contact.Contact", false]], "optimism.contact.edgecpp": [[3, "module-optimism.contact.EdgeCpp", false]], "optimism.contact.edgeintersection": [[3, "module-optimism.contact.EdgeIntersection", false]], "optimism.contact.friction": [[3, "module-optimism.contact.Friction", false]], "optimism.contact.levelset": [[3, "module-optimism.contact.Levelset", false]], "optimism.contact.levelsetconstraint": [[3, "module-optimism.contact.LevelsetConstraint", false]], "optimism.contact.mortarcontact": [[3, "module-optimism.contact.MortarContact", false]], "optimism.contact.penaltycontact": [[3, "module-optimism.contact.PenaltyContact", false]], "optimism.contact.search": [[3, "module-optimism.contact.Search", false]], "optimism.contact.test": [[4, "module-optimism.contact.test", false]], "optimism.contact.test.test_contact": [[4, "module-optimism.contact.test.test_Contact", false]], "optimism.contact.test.test_cpp": [[4, "module-optimism.contact.test.test_Cpp", false]], "optimism.contact.test.test_edgeintersection": [[4, "module-optimism.contact.test.test_EdgeIntersection", false]], "optimism.contact.test.test_levelsetconstraint": [[4, "module-optimism.contact.test.test_LevelsetConstraint", false]], "optimism.contact.test.test_mortargeom": [[4, "module-optimism.contact.test.test_MortarGeom", false]], "optimism.contact.test.test_newtonglobalization": [[4, "module-optimism.contact.test.test_NewtonGlobalization", false]], "optimism.contact.test.test_search": [[4, "module-optimism.contact.test.test_Search", false]], "optimism.contact.test.test_twobodycontact": [[4, "module-optimism.contact.test.test_TwoBodyContact", false]], "optimism.contact.test.test_twobodymortarcontact": [[4, "module-optimism.contact.test.test_TwoBodyMortarContact", false]], "optimism.equationsolver": [[2, "module-optimism.EquationSolver", false]], "optimism.equationsolversubspace": [[2, "module-optimism.EquationSolverSubspace", false]], "optimism.functionspace": [[2, "module-optimism.FunctionSpace", false]], "optimism.interpolants": [[2, "module-optimism.Interpolants", false]], "optimism.j2plasticphasefield": [[2, "module-optimism.J2PlasticPhaseField", false]], "optimism.jaxconfig": [[2, "module-optimism.JaxConfig", false]], "optimism.linalg": [[2, "module-optimism.LinAlg", false]], "optimism.lu": [[2, "module-optimism.LU", false]], "optimism.material": [[5, "module-optimism.material", false]], "optimism.material.gent": [[5, "module-optimism.material.Gent", false]], "optimism.material.hardening": [[5, "module-optimism.material.Hardening", false]], "optimism.material.hyperviscoelastic": [[5, "module-optimism.material.HyperViscoelastic", false]], "optimism.material.j2plastic": [[5, "module-optimism.material.J2Plastic", false]], "optimism.material.linearelastic": [[5, "module-optimism.material.LinearElastic", false]], "optimism.material.materialmodel": [[5, "module-optimism.material.MaterialModel", false]], "optimism.material.materialuniaxialsimulator": [[5, "module-optimism.material.MaterialUniaxialSimulator", false]], "optimism.material.neohookean": [[5, "module-optimism.material.Neohookean", false]], "optimism.material.test": [[6, "module-optimism.material.test", false]], "optimism.material.test.test_gent": [[6, "module-optimism.material.test.test_Gent", false]], "optimism.material.test.test_hardening": [[6, "module-optimism.material.test.test_Hardening", false]], "optimism.material.test.test_hypervisco": [[6, "module-optimism.material.test.test_HyperVisco", false]], "optimism.material.test.test_j2plastic": [[6, "module-optimism.material.test.test_J2Plastic", false]], "optimism.material.test.test_linearelastic": [[6, "module-optimism.material.test.test_LinearElastic", false]], "optimism.material.test.test_materialuniaxialsimulator": [[6, "module-optimism.material.test.test_MaterialUniaxialSimulator", false]], "optimism.material.test.test_ratesensitivity": [[6, "module-optimism.material.test.test_RateSensitivity", false]], "optimism.math": [[2, "module-optimism.Math", false]], "optimism.mechanics": [[2, "module-optimism.Mechanics", false]], "optimism.mesh": [[2, "module-optimism.Mesh", false]], "optimism.meshplot": [[2, "module-optimism.MeshPlot", false]], "optimism.minimizescalar": [[2, "module-optimism.MinimizeScalar", false]], "optimism.newtonsolver": [[2, "module-optimism.NewtonSolver", false]], "optimism.objective": [[2, "module-optimism.Objective", false]], "optimism.phasefield": [[7, "module-optimism.phasefield", false]], "optimism.phasefield.materialpointsimulator": [[7, "module-optimism.phasefield.MaterialPointSimulator", false]], "optimism.phasefield.phasefield": [[7, "module-optimism.phasefield.PhaseField", false]], "optimism.phasefield.phasefieldlorentzplastic": [[7, "module-optimism.phasefield.PhaseFieldLorentzPlastic", false]], "optimism.phasefield.phasefieldmaterialmodel": [[7, "module-optimism.phasefield.PhaseFieldMaterialModel", false]], "optimism.phasefield.phasefieldthreshold": [[7, "module-optimism.phasefield.PhaseFieldThreshold", false]], "optimism.phasefield.phasefieldthresholdplastic": [[7, "module-optimism.phasefield.PhaseFieldThresholdPlastic", false]], "optimism.phasefield.test": [[8, "module-optimism.phasefield.test", false]], "optimism.phasefield.test.plotphasefieldthresholdmodel": [[8, "module-optimism.phasefield.test.plotPhaseFieldThresholdModel", false]], "optimism.phasefield.test.test_phasefieldlorentzplastic": [[8, "module-optimism.phasefield.test.test_PhaseFieldLorentzPlastic", false]], "optimism.phasefield.test.test_phasefieldlorentzplasticpatch": [[8, "module-optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch", false]], "optimism.phasefield.test.test_phasefieldthreshold": [[8, "module-optimism.phasefield.test.test_PhaseFieldThreshold", false]], "optimism.phasefield.test.test_phasefieldthresholdpatch": [[8, "module-optimism.phasefield.test.test_PhaseFieldThresholdPatch", false]], "optimism.phasefield.test.test_phasefieldthresholdplastic": [[8, "module-optimism.phasefield.test.test_PhaseFieldThresholdPlastic", false]], "optimism.phasefield.test.test_phasefielduniaxial": [[8, "module-optimism.phasefield.test.test_PhaseFieldUniaxial", false]], "optimism.quadraturerule": [[2, "module-optimism.QuadratureRule", false]], "optimism.readexodusmesh": [[2, "module-optimism.ReadExodusMesh", false]], "optimism.readmesh": [[2, "module-optimism.ReadMesh", false]], "optimism.scalarrootfind": [[2, "module-optimism.ScalarRootFind", false]], "optimism.smoothfunctions": [[2, "module-optimism.SmoothFunctions", false]], "optimism.sparsecholesky": [[2, "module-optimism.SparseCholesky", false]], "optimism.sparsematrixassembler": [[2, "module-optimism.SparseMatrixAssembler", false]], "optimism.surface": [[2, "module-optimism.Surface", false]], "optimism.tensormath": [[2, "module-optimism.TensorMath", false]], "optimism.test": [[9, "module-optimism.test", false]], "optimism.test.convexityplot": [[9, "module-optimism.test.ConvexityPlot", false]], "optimism.test.meshfixture": [[9, "module-optimism.test.MeshFixture", false]], "optimism.test.test_axisymmpatchtest": [[9, "module-optimism.test.test_AxisymmPatchTest", false]], "optimism.test.test_dofmanager": [[9, "module-optimism.test.test_DofManager", false]], "optimism.test.test_equationsolver": [[9, "module-optimism.test.test_EquationSolver", false]], "optimism.test.test_functionspace": [[9, "module-optimism.test.test_FunctionSpace", false]], "optimism.test.test_interpolants": [[9, "module-optimism.test.test_Interpolants", false]], "optimism.test.test_jaxconfig": [[9, "module-optimism.test.test_JaxConfig", false]], "optimism.test.test_linalg": [[9, "module-optimism.test.test_LinAlg", false]], "optimism.test.test_math": [[9, "module-optimism.test.test_Math", false]], "optimism.test.test_mechanics": [[9, "module-optimism.test.test_Mechanics", false]], "optimism.test.test_mesh": [[9, "module-optimism.test.test_Mesh", false]], "optimism.test.test_minimizescalar": [[9, "module-optimism.test.test_MinimizeScalar", false]], "optimism.test.test_newmark": [[9, "module-optimism.test.test_Newmark", false]], "optimism.test.test_objective": [[9, "module-optimism.test.test_Objective", false]], "optimism.test.test_patchtest": [[9, "module-optimism.test.test_PatchTest", false]], "optimism.test.test_patchtestpou": [[9, "module-optimism.test.test_PatchTestPou", false]], "optimism.test.test_quadraturerule": [[9, "module-optimism.test.test_QuadratureRule", false]], "optimism.test.test_readexodusmesh": [[9, "module-optimism.test.test_ReadExodusMesh", false]], "optimism.test.test_readmesh": [[9, "module-optimism.test.test_ReadMesh", false]], "optimism.test.test_scalarrootfinder": [[9, "module-optimism.test.test_ScalarRootFinder", false]], "optimism.test.test_smoothfunctions": [[9, "module-optimism.test.test_SmoothFunctions", false]], "optimism.test.test_sparsematrix": [[9, "module-optimism.test.test_SparseMatrix", false]], "optimism.test.test_sparsepreconditioner": [[9, "module-optimism.test.test_SparsePreconditioner", false]], "optimism.test.test_surface": [[9, "module-optimism.test.test_Surface", false]], "optimism.test.test_tensormath": [[9, "module-optimism.test.test_TensorMath", false]], "optimism.test.test_traction": [[9, "module-optimism.test.test_Traction", false]], "optimism.test.test_trustregionspg": [[9, "module-optimism.test.test_TrustRegionSPG", false]], "optimism.test.test_volumeaveragej": [[9, "module-optimism.test.test_VolumeAverageJ", false]], "optimism.test.test_vtkwriter": [[9, "module-optimism.test.test_VTKWriter", false]], "optimism.test.testfixture": [[9, "module-optimism.test.TestFixture", false]], "optimism.timer": [[2, "module-optimism.Timer", false]], "optimism.trustregionspg": [[2, "module-optimism.TrustRegionSPG", false]], "optimism.vtkwriter": [[2, "module-optimism.VTKWriter", false]], "optimism.warmstart": [[2, "module-optimism.WarmStart", false]], "output_matrix() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.output_matrix", false]], "output_matrix() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.output_matrix", false]], "over_iters (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.over_iters", false]], "param_index_update() (in module optimism.objective)": [[2, "optimism.Objective.param_index_update", false]], "parameterizationtestsuite (class in optimism.test.test_functionspace)": [[9, "optimism.test.test_FunctionSpace.ParameterizationTestSuite", false]], "params (class in optimism.objective)": [[2, "optimism.Objective.Params", false]], "params (in module optimism.contact.friction)": [[3, "optimism.contact.Friction.Params", false]], "parentelement (class in optimism.interpolants)": [[2, "optimism.Interpolants.ParentElement", false]], "parentelement (optimism.mesh.mesh attribute)": [[2, "id18", false], [2, "optimism.Mesh.Mesh.parentElement", false]], "parentelement1d (optimism.mesh.mesh attribute)": [[2, "id19", false], [2, "optimism.Mesh.Mesh.parentElement1d", false]], "parse_2d_to_3d_gradient_transformation() (in module optimism.mechanics)": [[2, "optimism.Mechanics.parse_2D_to_3D_gradient_transformation", false]], "pascal_triangle_monomials() (in module optimism.interpolants)": [[2, "optimism.Interpolants.pascal_triangle_monomials", false]], "patchtestquadraticelements (class in optimism.test.test_patchtestpou)": [[9, "optimism.test.test_PatchTestPou.PatchTestQuadraticElements", false]], "penalty_scaling (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings.penalty_scaling", false]], "phase_potential_density() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.phase_potential_density", false]], "phase_potential_density() (in module optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.phase_potential_density", false]], "phase_potential_density() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.phase_potential_density", false]], "phasefieldfunctions (class in optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.PhaseFieldFunctions", false]], "phasefieldthresholdmodelfixture (class in optimism.phasefield.test.test_phasefieldthreshold)": [[8, "optimism.phasefield.test.test_PhaseFieldThreshold.PhaseFieldThresholdModelFixture", false]], "phasefieldthresholduniaxialfixture (class in optimism.phasefield.test.plotphasefieldthresholdmodel)": [[8, 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"optimism.Mechanics.plane_strain_gradient_transformation", false]], "plasticityonmesh (class in optimism.material.test.test_j2plastic)": [[6, "optimism.material.test.test_J2Plastic.PlasticityOnMesh", false]], "plot_grid() (optimism.contact.test.test_cpp.testedgeintersection method)": [[4, "optimism.contact.test.test_Cpp.TestEdgeIntersection.plot_grid", false]], "plot_mesh() (in module optimism.meshplot)": [[2, "optimism.MeshPlot.plot_mesh", false]], "plot_mesh_with_field() (in module optimism.meshplot)": [[2, "optimism.MeshPlot.plot_mesh_with_field", false]], "plot_solution() (optimism.contact.test.test_twobodycontact.twobodycontactfixture method)": [[4, "optimism.contact.test.test_TwoBodyContact.TwoBodyContactFixture.plot_solution", false]], "plot_solution() (optimism.contact.test.test_twobodymortarcontact.twobodycontactfixture method)": [[4, "optimism.contact.test.test_TwoBodyMortarContact.TwoBodyContactFixture.plot_solution", false]], "power_law() (in module 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"optimism.Objective.ScaledPrecondStrategy.precond_at_attempt", false]], "precond_at_attempt() (optimism.objective.twotryprecondstrategy method)": [[2, "optimism.Objective.TwoTryPrecondStrategy.precond_at_attempt", false]], "precond_update_func() (optimism.test.test_sparsepreconditioner.sparsecholeskyfixture method)": [[9, "optimism.test.test_SparsePreconditioner.SparseCholeskyFixture.precond_update_func", false]], "preconditioned_project_to_boundary() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.preconditioned_project_to_boundary", false]], "precondstrategy (class in optimism.constrainedobjective)": [[2, "optimism.ConstrainedObjective.PrecondStrategy", false]], "precondstrategy (class in optimism.objective)": [[2, "optimism.Objective.PrecondStrategy", false]], "predict (optimism.mechanics.dynamicsfunctions attribute)": [[2, "optimism.Mechanics.DynamicsFunctions.predict", false]], "print_banner() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.print_banner", false]], "print_min_banner() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.print_min_banner", false]], "print_min_banner() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.print_min_banner", false]], "project() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.project", false]], "project_onto_tr() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.project_onto_tr", false]], "project_quadrature_field_to_element_field() (in module optimism.functionspace)": [[2, "optimism.FunctionSpace.project_quadrature_field_to_element_field", false]], "project_to_boundary() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.project_to_boundary", false]], "project_to_boundary_with_coefs() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.project_to_boundary_with_coefs", false]], "project_to_boundary_with_coefs() (in module optimism.equationsolversubspace)": [[2, "optimism.EquationSolverSubspace.project_to_boundary_with_coefs", false]], "properties (class in optimism.phasefield.phasefieldthreshold)": [[7, "optimism.phasefield.PhaseFieldThreshold.Properties", false]], "properties (class in optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.Properties", false]], "props (optimism.material.materialmodel.matprops attribute)": [[5, "optimism.material.MaterialModel.MatProps.props", false]], "quadratic() (in module optimism.test.test_trustregionspg)": [[9, "optimism.test.test_TrustRegionSPG.quadratic", false]], "quadraticpatchtestquadraticelements (class in optimism.test.test_patchtest)": [[9, "optimism.test.test_PatchTest.QuadraticPatchTestQuadraticElements", false]], "quadraturerule (class in optimism.quadraturerule)": [[2, "optimism.QuadratureRule.QuadratureRule", false]], "quadraturerule (optimism.functionspace.functionspace attribute)": [[2, "id2", false], [2, "optimism.FunctionSpace.FunctionSpace.quadratureRule", false]], "r() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.r", false]], "r() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.r", false]], "r() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.r", false]], "r() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.r", false]], "r_and_deqps() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.r_and_deqps", false]], "r_and_deqps() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.r_and_deqps", false]], "r_and_deqps() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.r_and_deqps", false]], "r_tol (optimism.scalarrootfind.settings attribute)": [[2, "optimism.ScalarRootFind.Settings.r_tol", false]], "ratesensitivityfixture (class in optimism.material.test.test_ratesensitivity)": [[6, "optimism.material.test.test_RateSensitivity.RateSensitivityFixture", false]], "ratesensitivitymodel (class in optimism.material.hardening)": [[5, "optimism.material.Hardening.RateSensitivityModel", false]], "ratesentivityinsidej2 (class in optimism.material.test.test_ratesensitivity)": [[6, "optimism.material.test.test_RateSensitivity.RateSentivityInsideJ2", false]], "read_exodus_mesh() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh.read_exodus_mesh", false]], "read_exodus_mesh_element_properties() (in module optimism.readexodusmesh)": [[2, "optimism.ReadExodusMesh.read_exodus_mesh_element_properties", false]], "read_json_mesh() (in module optimism.readmesh)": [[2, "optimism.ReadMesh.read_json_mesh", false]], "relative_gmres_tol (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings.relative_gmres_tol", false]], "relative_gmres_tol (optimism.newtonsolver.settings attribute)": [[2, "optimism.NewtonSolver.Settings.relative_gmres_tol", false]], "reset_kappa() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.reset_kappa", false]], "residual() (in module optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.residual", false]], "residual_norm (optimism.scalarrootfind.solutioninfo attribute)": [[2, "optimism.ScalarRootFind.SolutionInfo.residual_norm", false]], "right_polar_decomposition() (in module optimism.tensormath)": [[2, "optimism.TensorMath.right_polar_decomposition", false]], "rosenbrock() (in module optimism.test.test_trustregionspg)": [[9, "optimism.test.test_TrustRegionSPG.rosenbrock", false]], "rtsafe_() (in module optimism.scalarrootfind)": [[2, "optimism.ScalarRootFind.rtsafe_", false]], "run() (in module optimism.material.materialuniaxialsimulator)": [[5, "optimism.material.MaterialUniaxialSimulator.run", false]], "run() (optimism.phasefield.materialpointsimulator.materialpointsimulator method)": [[7, "optimism.phasefield.MaterialPointSimulator.MaterialPointSimulator.run", false]], "safe_sqrt_jvp() (in module optimism.math)": [[2, "optimism.Math.safe_sqrt_jvp", false]], "scalarrootfindtestfixture (class in optimism.test.test_scalarrootfinder)": [[9, "optimism.test.test_ScalarRootFinder.ScalarRootFindTestFixture", false]], "scalars (optimism.vtkwriter.vtkfieldtype attribute)": [[2, "optimism.VTKWriter.VTKFieldType.SCALARS", false]], "scaledobjective (class in optimism.objective)": [[2, "optimism.Objective.ScaledObjective", false]], "scaledprecondstrategy (class in optimism.boundconstrainedobjective)": [[2, "optimism.BoundConstrainedObjective.ScaledPrecondStrategy", false]], "scaledprecondstrategy (class in optimism.objective)": [[2, "optimism.Objective.ScaledPrecondStrategy", false]], "set_initial_conditions() (optimism.test.test_newmark.dynamicsfixture method)": [[9, "optimism.test.test_Newmark.DynamicsFixture.set_initial_conditions", false]], "settings (class in optimism.alsolver)": [[2, "optimism.AlSolver.Settings", false]], "settings (class in optimism.equationsolver)": [[2, "optimism.EquationSolver.Settings", false]], "settings (class in optimism.minimizescalar)": [[2, "optimism.MinimizeScalar.Settings", false]], "settings (class in optimism.newtonsolver)": [[2, "optimism.NewtonSolver.Settings", false]], "settings (class in optimism.scalarrootfind)": [[2, "optimism.ScalarRootFind.Settings", false]], "settings (class in optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.Settings", false]], "settings_with_new_tol() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.settings_with_new_tol", false]], "settings_with_new_tol() (in module optimism.trustregionspg)": [[2, "optimism.TrustRegionSPG.settings_with_new_tol", false]], "setup() 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"optimism.test.test_JaxConfig.TestJaxConfiguration", false]], "testlevelsetcontactconstraint (class in optimism.contact.test.test_levelsetconstraint)": [[4, "optimism.contact.test.test_LevelsetConstraint.TestLevelsetContactConstraint", false]], "testlinalg (class in optimism.test.test_linalg)": [[9, "optimism.test.test_LinAlg.TestLinAlg", false]], "testlinearelasticmaterial (class in optimism.material.test.test_linearelastic)": [[6, "optimism.material.test.test_LinearElastic.TestLinearElasticMaterial", false]], "testmathinnerproduct (class in optimism.test.test_math)": [[9, "optimism.test.test_Math.TestMathInnerProduct", false]], "testmathsum (class in optimism.test.test_math)": [[9, "optimism.test.test_Math.TestMathSum", false]], "testmeshreaddata (class in optimism.test.test_readexodusmesh)": [[9, "optimism.test.test_ReadExodusMesh.TestMeshReadData", false]], "testmeshreaddata (class in optimism.test.test_readmesh)": [[9, "optimism.test.test_ReadMesh.TestMeshReadData", false]], 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"optimism.test.test_Objective.TestObjective", false]], "testoffedges() (optimism.contact.test.test_mortargeom.testmortargeom method)": [[4, "optimism.contact.test.test_MortarGeom.TestMortarGeom.testOffEdges", false]], "testprojectiononboundary (class in optimism.test.test_trustregionspg)": [[9, "optimism.test.test_TrustRegionSPG.TestProjectionOnBoundary", false]], "testquadraticsolver (class in optimism.contact.test.test_newtonglobalization)": [[4, "optimism.contact.test.test_NewtonGlobalization.TestQuadraticSolver", false]], "testquadraturerules (class in optimism.test.test_quadraturerule)": [[9, "optimism.test.test_QuadratureRule.TestQuadratureRules", false]], "testsinglemeshfixture (class in optimism.phasefield.test.test_phasefieldlorentzplasticpatch)": [[8, "optimism.phasefield.test.test_PhaseFieldLorentzPlasticPatch.TestSingleMeshFixture", false]], "testsinglemeshfixture (class in optimism.phasefield.test.test_phasefieldthresholdpatch)": [[8, 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optimism.test.test_trustregionspg)": [[9, "optimism.test.test_TrustRegionSPG.TestTrustRegionSPGRosenbrock", false]], "testuniaxial() (optimism.phasefield.test.plotphasefieldthresholdmodel.phasefieldthresholduniaxialfixture method)": [[8, "optimism.phasefield.test.plotPhaseFieldThresholdModel.PhaseFieldThresholdUniaxialFixture.testUniaxial", false]], "testuniaxial() (optimism.phasefield.test.test_phasefielduniaxial.phasefielduniaxialfixture method)": [[8, "optimism.phasefield.test.test_PhaseFieldUniaxial.PhaseFieldUniaxialFixture.testUniaxial", false]], "testvolumeaverage (class in optimism.test.test_volumeaveragej)": [[9, "optimism.test.test_VolumeAverageJ.TestVolumeAverage", false]], "testvtkwriter (class in optimism.test.test_vtkwriter)": [[9, "optimism.test.test_VTKWriter.TestVTKWriter", false]], "testvtkwriterhigherorder (class in optimism.test.test_vtkwriter)": [[9, "optimism.test.test_VTKWriter.TestVTKWriterHigherOrder", false]], "text (optimism.timer.timer attribute)": [[2, "optimism.Timer.Timer.text", false]], "time (optimism.material.materialuniaxialsimulator.uniaxialoutput attribute)": [[5, "id4", false], [5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput.time", false]], "time (optimism.objective.params attribute)": [[2, "optimism.Objective.Params.time", false]], "time_step() (optimism.test.test_newmark.dynamicsfixture method)": [[9, "optimism.test.test_Newmark.DynamicsFixture.time_step", false]], "timer (class in optimism.timer)": [[2, "optimism.Timer.Timer", false]], "timererror": [[2, "optimism.Timer.TimerError", false]], "timers (optimism.timer.timer attribute)": [[2, "optimism.Timer.Timer.timers", false]], "times (optimism.phasefield.materialpointsimulator.uniaxialoutput attribute)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput.times", false]], "tol (optimism.alsolver.settings attribute)": [[2, "optimism.AlSolver.Settings.tol", false]], "tol (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.tol", false]], "tol (optimism.minimizescalar.settings attribute)": [[2, "optimism.MinimizeScalar.Settings.tol", false]], "tol (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.tol", false]], "total_residual() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.total_residual", false]], "tr_size (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.tr_size", false]], "tr_size (optimism.trustregionspg.settings attribute)": [[2, "optimism.TrustRegionSPG.Settings.tr_size", false]], "trace() (in module optimism.tensormath)": [[2, "optimism.TensorMath.trace", false]], "tractionpatch (class in optimism.test.test_traction)": [[9, "optimism.test.test_Traction.TractionPatch", false]], "triangle_inradius() (in module optimism.test.test_mesh)": [[9, "optimism.test.test_Mesh.triangle_inradius", false]], "triaxiality() (in module optimism.tensormath)": [[2, "optimism.TensorMath.triaxiality", false]], "trspgcauchypointfixture (class in optimism.test.test_trustregionspg)": [[9, "optimism.test.test_TrustRegionSPG.TRSPGCauchyPointFixture", false]], "trust_region_cg() (in module optimism.equationsolversubspace)": [[2, "optimism.EquationSolverSubspace.trust_region_cg", false]], "trust_region_least_squares_solve() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.trust_region_least_squares_solve", false]], "trust_region_minimize() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.trust_region_minimize", false]], "trust_region_subspace_minimize() (in module optimism.equationsolversubspace)": [[2, "optimism.EquationSolverSubspace.trust_region_subspace_minimize", false]], "twobodycontactfixture (class in optimism.contact.test.test_twobodycontact)": [[4, "optimism.contact.test.test_TwoBodyContact.TwoBodyContactFixture", false]], "twobodycontactfixture (class in optimism.contact.test.test_twobodymortarcontact)": [[4, "optimism.contact.test.test_TwoBodyMortarContact.TwoBodyContactFixture", false]], "twotryprecondstrategy (class in optimism.objective)": [[2, "optimism.Objective.TwoTryPrecondStrategy", false]], "uniaxialoutput (class in optimism.material.materialuniaxialsimulator)": [[5, "optimism.material.MaterialUniaxialSimulator.UniaxialOutput", false]], "uniaxialoutput (class in optimism.phasefield.materialpointsimulator)": [[7, "optimism.phasefield.MaterialPointSimulator.UniaxialOutput", false]], "unknownindices (optimism.functionspace.dofmanager attribute)": [[2, "optimism.FunctionSpace.DofManager.unknownIndices", false]], "unpack_fields_2d() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.unpack_fields_2D", false]], "unpack_gradients_2d() (in module optimism.phasefield.phasefield)": [[7, "optimism.phasefield.PhaseField.unpack_gradients_2D", false]], "unsigned_char (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.UNSIGNED_CHAR", false]], "unsigned_int (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.UNSIGNED_INT", false]], "unsigned_long (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.UNSIGNED_LONG", false]], "unsigned_short (optimism.vtkwriter.vtkdatatype attribute)": [[2, "optimism.VTKWriter.VTKDataType.UNSIGNED_SHORT", false]], "update() (in module optimism.phasefield.test.test_phasefielduniaxial)": [[8, "optimism.phasefield.test.test_PhaseFieldUniaxial.update", false]], "update() (optimism.lu.lu method)": [[2, "optimism.LU.LU.update", false]], "update() (optimism.sparsecholesky.sparsecholesky method)": [[2, "optimism.SparseCholesky.SparseCholesky.update", false]], "update_precond() (optimism.constrainedobjective.constrainedobjective method)": [[2, "optimism.ConstrainedObjective.ConstrainedObjective.update_precond", false]], "update_precond() (optimism.objective.objective method)": [[2, "optimism.Objective.Objective.update_precond", false]], "update_state() (in module optimism.j2plasticphasefield)": [[2, "optimism.J2PlasticPhaseField.update_state", false]], "update_state() (in module optimism.material.j2plastic)": [[5, "optimism.material.J2Plastic.update_state", false]], "update_state() (in module optimism.phasefield.phasefieldlorentzplastic)": [[7, "optimism.phasefield.PhaseFieldLorentzPlastic.update_state", false]], "update_state() (in module optimism.phasefield.phasefieldthresholdplastic)": [[7, "optimism.phasefield.PhaseFieldThresholdPlastic.update_state", false]], "update_step_length_squared() (in module optimism.equationsolver)": [[2, "optimism.EquationSolver.update_step_length_squared", false]], "use_incremental_objective (optimism.equationsolver.settings attribute)": [[2, "optimism.EquationSolver.Settings.use_incremental_objective", false]], "use_incremental_objective (optimism.trustregionspg.settings attribute)": [[2, 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\ No newline at end of file