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Program keeps crashing when generating simulation samples on RFMIX v2.03-r0 but not RFMIX v2.02-r1 #24

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deven-n-vyas opened this issue Mar 15, 2020 · 2 comments

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@deven-n-vyas
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I am running RFMIX on our lab's server as well as the university's computing cluster. The former uses the older version RFMIX v2.02-r1 and the latter the newer RFMIX v2.03-r0

v2.02-r1 seems to work just fine, but v2.03-r0 keeps crashing when generating internal simulation samples.

Generating internal simulation samples... Warning: excessive genetic drift loss during simulated population generation. Reference panel is too unbalanced. Program may not exit simulation loop.

Is this is a bug, or has something changed between the two versions. They are using the exact same input files on both machines.

@Bennouhan
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I'm getting the same issue, happen to remember how you got past it or did you just go forward with v2.02?

@squigzzz
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I'm getting the same issue, going to try using v2.02-r1, and I will report back if that works. I am using the HGDP reference dataset, curious what reference set you all used ?

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