Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

is_fastq_gz for bam file #50

Open
masarunakajima opened this issue Aug 17, 2023 · 0 comments
Open

is_fastq_gz for bam file #50

masarunakajima opened this issue Aug 17, 2023 · 0 comments
Labels
question Further information is requested

Comments

@masarunakajima
Copy link
Member

Is is_fastq_gz suppose to be false for bam files? I think it is currently set to false, which causes bam files to be read as regular file instead of binary in get_tile_split_position. I get weird-looking output when I print out the first line of bam file in this funciton.
@masarunakajima masarunakajima added the question Further information is requested label Aug 17, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
question Further information is requested
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@masarunakajima