From 0b20df18838151e4ed6cb369f724680a83b1377a Mon Sep 17 00:00:00 2001 From: PPTeam CI Date: Thu, 15 Aug 2024 18:58:54 +0000 Subject: [PATCH] v2.73.0 rust server client front container/server container/full --- CHANGELOG.md | 2 +- client/package.json | 2 +- container/full/package.json | 6 +-- container/server/package.json | 4 +- front/package.json | 4 +- package-lock.json | 76 ++++++++++++++--------------------- package.json | 2 +- rust/package.json | 4 +- server/package.json | 4 +- 9 files changed, 45 insertions(+), 59 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index a57db5bf69..147d614602 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -2,7 +2,7 @@ All notable changes to this project will be documented in this file. -## Unreleased +## 2.73.0 Features: - From custom variable -> gene expression, submit one gene will launch violin plot overlayed by the custom variable, submit two genes will launch scatter plot colored by the custom variable. diff --git a/client/package.json b/client/package.json index eb28e9dbbc..34ff5f76b8 100644 --- a/client/package.json +++ b/client/package.json @@ -1,6 +1,6 @@ { "name": "@sjcrh/proteinpaint-client", - "version": "2.72.0", + "version": "2.73.0", "description": "a genomics visualization tool for exploring a cohort's genotype and phenotype data", "main": "dist/app.js", "module": "dist/app.js", diff --git a/container/full/package.json b/container/full/package.json index 679f7ef11e..05ecfcea69 100644 --- a/container/full/package.json +++ b/container/full/package.json @@ -1,14 +1,14 @@ { "private": true, "name": "@sjcrh/ppfull", - "version": "2.72.0", + "version": "2.73.0", "bin": "app-full.js", "scripts": { "release": "" }, "dependencies": { - "@sjcrh/proteinpaint-front": "2.72.0", - "@sjcrh/proteinpaint-server": "2.72.0" + "@sjcrh/proteinpaint-front": "2.73.0", + "@sjcrh/proteinpaint-server": "2.73.0" }, "files": [ "app-full.js" diff --git a/container/server/package.json b/container/server/package.json index 3cc77fe7be..01a3484b0b 100644 --- a/container/server/package.json +++ b/container/server/package.json @@ -1,13 +1,13 @@ { "private": true, "name": "@sjcrh/ppserver", - "version": "2.72.0", + "version": "2.73.0", "bin": "app-server.js", "scripts": { "release": "" }, "dependencies": { - "@sjcrh/proteinpaint-server": "2.72.0" + "@sjcrh/proteinpaint-server": "2.73.0" }, "files": [ "app-server.js" diff --git a/front/package.json b/front/package.json index 5b090952ee..b96cfde7c5 100644 --- a/front/package.json +++ b/front/package.json @@ -1,6 +1,6 @@ { "name": "@sjcrh/proteinpaint-front", - "version": "2.72.0", + "version": "2.73.0", "browser": "src/app.js", "main": "src/index.js", "bin": "init.js", @@ -12,7 +12,7 @@ "test:integration": "echo 'TODO: front integration tests'" }, "devDependencies": { - "@sjcrh/proteinpaint-client": "2.72.0", + "@sjcrh/proteinpaint-client": "2.73.0", "webpack": "^5.76.0", "webpack-cli": "^4.9.2", "webpack-node-externals": "^3.0.0", diff --git a/package-lock.json b/package-lock.json index a918ed0647..16194ef005 100644 --- a/package-lock.json +++ b/package-lock.json @@ -1,12 +1,12 @@ { "name": "@sjcrh/proteinpaint", - "version": "2.72.0", + "version": "2.73.0", "lockfileVersion": 2, "requires": true, "packages": { "": { "name": "@sjcrh/proteinpaint", - "version": "2.72.0", + "version": "2.73.0", "license": "SEE LICENSE IN ./LICENSE", "workspaces": [ "rust", @@ -80,7 +80,7 @@ }, "client": { "name": "@sjcrh/proteinpaint-client", - "version": "2.72.0", + "version": "2.73.0", "license": "SEE LICENSE IN ./LICENSE", "devDependencies": { "@babel/core": "^7.9.6", @@ -118,8 +118,6 @@ "ol-ext": "^4.0.21", "openseadragon": "^4.1.1", "partjson": "^0.58.2", - "postcss": "^8.4.41", - "postcss-import": "^14.1.0", "prettier": "^2.8.8", "process": "^0.11.10", "read-cache": "^1.0.0", @@ -135,6 +133,10 @@ "webpack-cli": "^4.10.0", "webpack-node-externals": "^3.0.0", "webpack-notifier": "^1.15.0" + }, + "peerDependencies": { + "postcss": "^8.4.41", + "postcss-import": "^14.1.0" } }, "container": { @@ -148,10 +150,10 @@ }, "container/full": { "name": "@sjcrh/ppfull", - "version": "2.72.0", + "version": "2.73.0", "dependencies": { - "@sjcrh/proteinpaint-front": "2.72.0", - "@sjcrh/proteinpaint-server": "2.72.0" + "@sjcrh/proteinpaint-front": "2.73.0", + "@sjcrh/proteinpaint-server": "2.73.0" }, "bin": { "ppfull": "app-full.js" @@ -159,9 +161,9 @@ }, "container/server": { "name": "@sjcrh/ppserver", - "version": "2.72.0", + "version": "2.73.0", "dependencies": { - "@sjcrh/proteinpaint-server": "2.72.0" + "@sjcrh/proteinpaint-server": "2.73.0" }, "bin": { "ppserver": "app-server.js" @@ -169,13 +171,13 @@ }, "front": { "name": "@sjcrh/proteinpaint-front", - "version": "2.72.0", + "version": "2.73.0", "license": "SEE LICENSE IN ./LICENSE", "bin": { "proteinpaint-front": "init.js" }, "devDependencies": { - "@sjcrh/proteinpaint-client": "2.72.0", + "@sjcrh/proteinpaint-client": "2.73.0", "webpack": "^5.76.0", "webpack-cli": "^4.9.2", "webpack-node-externals": "^3.0.0", @@ -10591,7 +10593,6 @@ "version": "3.3.7", "resolved": "https://registry.npmjs.org/nanoid/-/nanoid-3.3.7.tgz", "integrity": "sha512-eSRppjcPIatRIMC1U6UngP8XFcz8MQWGQdt1MTBQ7NaAmvXDfvNxbvWV3x2y6CdEUciCSsDHDQZbhYaB8QEo2g==", - "dev": true, "funding": [ { "type": "github", @@ -11431,8 +11432,7 @@ "node_modules/picocolors": { "version": "1.0.1", "resolved": "https://registry.npmjs.org/picocolors/-/picocolors-1.0.1.tgz", - "integrity": "sha512-anP1Z8qwhkbmu7MFP5iTt+wQKXgwzf7zTyGlcdzabySa9vd0Xt392U0rVmz9poOaBj0uHJKyyo9/upk0HrEQew==", - "dev": true + "integrity": "sha512-anP1Z8qwhkbmu7MFP5iTt+wQKXgwzf7zTyGlcdzabySa9vd0Xt392U0rVmz9poOaBj0uHJKyyo9/upk0HrEQew==" }, "node_modules/picomatch": { "version": "2.3.1", @@ -11493,7 +11493,6 @@ "version": "8.4.41", "resolved": "https://registry.npmjs.org/postcss/-/postcss-8.4.41.tgz", "integrity": "sha512-TesUflQ0WKZqAvg52PWL6kHgLKP6xB6heTOdoYM0Wt2UHyxNa4K25EZZMgKns3BH1RLVbZCREPpLY0rhnNoHVQ==", - "dev": true, "funding": [ { "type": "opencollective", @@ -11616,7 +11615,7 @@ "version": "14.1.0", "resolved": "https://registry.npmjs.org/postcss-import/-/postcss-import-14.1.0.tgz", "integrity": "sha512-flwI+Vgm4SElObFVPpTIT7SU7R3qk2L7PyduMcokiaVKuWv9d/U+Gm/QAd8NDLuykTWTkcrjOeD2Pp1rMeBTGw==", - "dev": true, + "peer": true, "dependencies": { "postcss-value-parser": "^4.0.0", "read-cache": "^1.0.0", @@ -12062,8 +12061,7 @@ "node_modules/postcss-value-parser": { "version": "4.2.0", "resolved": "https://registry.npmjs.org/postcss-value-parser/-/postcss-value-parser-4.2.0.tgz", - "integrity": "sha512-1NNCs6uurfkVbeXG4S8JFT9t19m45ICnif8zWLd5oPSZ50QnwMfK+H3jv408d4jw/7Bttv5axS5IiHoLaVNHeQ==", - "dev": true + "integrity": "sha512-1NNCs6uurfkVbeXG4S8JFT9t19m45ICnif8zWLd5oPSZ50QnwMfK+H3jv408d4jw/7Bttv5axS5IiHoLaVNHeQ==" }, "node_modules/prebuild-install": { "version": "7.1.1", @@ -12413,7 +12411,6 @@ "version": "1.0.0", "resolved": "https://registry.npmjs.org/read-cache/-/read-cache-1.0.0.tgz", "integrity": "sha512-Owdv/Ft7IjOgm/i0xvNDZ1LrRANRfew4b2prF3OWMQLxLfu3bS8FVhCsrSCMK4lR56Y9ya+AThoTpDCTxCmpRA==", - "dev": true, "dependencies": { "pify": "^2.3.0" } @@ -12422,7 +12419,6 @@ "version": "2.3.0", "resolved": "https://registry.npmjs.org/pify/-/pify-2.3.0.tgz", "integrity": "sha512-udgsAY+fTnvv7kI7aaxbqwWNb0AHiB0qBO89PZKPkoTmGOgdbrHDKD+0B2X4uTfJ/FT1R09r9gTsjUjNJotuog==", - "dev": true, "engines": { "node": ">=0.10.0" } @@ -13441,7 +13437,6 @@ "version": "1.2.0", "resolved": "https://registry.npmjs.org/source-map-js/-/source-map-js-1.2.0.tgz", "integrity": "sha512-itJW8lvSA0TXEphiRoawsCksnlf8SyvmFzIhltqAHluXd88pkCd+cXJVHTDwdCr0IzwptSm035IHQktUu1QUMg==", - "dev": true, "engines": { "node": ">=0.10.0" } @@ -15536,7 +15531,7 @@ }, "rust": { "name": "@sjcrh/proteinpaint-rust", - "version": "2.61.1", + "version": "2.73.0", "hasInstallScript": true, "license": "SEE LICENSE IN ./LICENSE", "dependencies": { @@ -15634,11 +15629,11 @@ }, "server": { "name": "@sjcrh/proteinpaint-server", - "version": "2.72.0", + "version": "2.73.0", "license": "SEE LICENSE IN ./LICENSE", "dependencies": { "@sjcrh/augen": "2.46.0", - "@sjcrh/proteinpaint-rust": "2.61.1", + "@sjcrh/proteinpaint-rust": "2.73.0", "better-sqlite3": "^9.4.1", "body-parser": "^1.15.2", "canvas": "~2.11.2", @@ -17745,14 +17740,14 @@ "@sjcrh/ppfull": { "version": "file:container/full", "requires": { - "@sjcrh/proteinpaint-front": "2.72.0", - "@sjcrh/proteinpaint-server": "2.72.0" + "@sjcrh/proteinpaint-front": "2.73.0", + "@sjcrh/proteinpaint-server": "2.73.0" } }, "@sjcrh/ppserver": { "version": "file:container/server", "requires": { - "@sjcrh/proteinpaint-server": "2.72.0" + "@sjcrh/proteinpaint-server": "2.73.0" } }, "@sjcrh/proteinpaint-client": { @@ -17793,8 +17788,6 @@ "ol-ext": "^4.0.21", "openseadragon": "^4.1.1", "partjson": "^0.58.2", - "postcss": "^8.4.41", - "postcss-import": "^14.1.0", "prettier": "^2.8.8", "process": "^0.11.10", "read-cache": "^1.0.0", @@ -17815,7 +17808,7 @@ "@sjcrh/proteinpaint-front": { "version": "file:front", "requires": { - "@sjcrh/proteinpaint-client": "2.72.0", + "@sjcrh/proteinpaint-client": "2.73.0", "webpack": "^5.76.0", "webpack-cli": "^4.9.2", "webpack-node-externals": "^3.0.0", @@ -17891,7 +17884,7 @@ "@babel/preset-typescript": "^7.21.4", "@babel/register": "^7.14.5", "@sjcrh/augen": "2.46.0", - "@sjcrh/proteinpaint-rust": "2.61.1", + "@sjcrh/proteinpaint-rust": "2.73.0", "@types/node": "^20.11.24", "@types/tough-cookie": "^4.0.5", "@typescript-eslint/eslint-plugin": "^5.60.0", @@ -23842,8 +23835,7 @@ "nanoid": { "version": "3.3.7", "resolved": "https://registry.npmjs.org/nanoid/-/nanoid-3.3.7.tgz", - "integrity": "sha512-eSRppjcPIatRIMC1U6UngP8XFcz8MQWGQdt1MTBQ7NaAmvXDfvNxbvWV3x2y6CdEUciCSsDHDQZbhYaB8QEo2g==", - "dev": true + "integrity": "sha512-eSRppjcPIatRIMC1U6UngP8XFcz8MQWGQdt1MTBQ7NaAmvXDfvNxbvWV3x2y6CdEUciCSsDHDQZbhYaB8QEo2g==" }, "napi-build-utils": { "version": "1.0.2", @@ -24468,8 +24460,7 @@ "picocolors": { "version": "1.0.1", "resolved": "https://registry.npmjs.org/picocolors/-/picocolors-1.0.1.tgz", - "integrity": "sha512-anP1Z8qwhkbmu7MFP5iTt+wQKXgwzf7zTyGlcdzabySa9vd0Xt392U0rVmz9poOaBj0uHJKyyo9/upk0HrEQew==", - "dev": true + "integrity": "sha512-anP1Z8qwhkbmu7MFP5iTt+wQKXgwzf7zTyGlcdzabySa9vd0Xt392U0rVmz9poOaBj0uHJKyyo9/upk0HrEQew==" }, "picomatch": { "version": "2.3.1", @@ -24512,7 +24503,6 @@ "version": "8.4.41", "resolved": "https://registry.npmjs.org/postcss/-/postcss-8.4.41.tgz", "integrity": "sha512-TesUflQ0WKZqAvg52PWL6kHgLKP6xB6heTOdoYM0Wt2UHyxNa4K25EZZMgKns3BH1RLVbZCREPpLY0rhnNoHVQ==", - "dev": true, "requires": { "nanoid": "^3.3.7", "picocolors": "^1.0.1", @@ -24583,7 +24573,7 @@ "version": "14.1.0", "resolved": "https://registry.npmjs.org/postcss-import/-/postcss-import-14.1.0.tgz", "integrity": "sha512-flwI+Vgm4SElObFVPpTIT7SU7R3qk2L7PyduMcokiaVKuWv9d/U+Gm/QAd8NDLuykTWTkcrjOeD2Pp1rMeBTGw==", - "dev": true, + "peer": true, "requires": { "postcss-value-parser": "^4.0.0", "read-cache": "^1.0.0", @@ -24856,8 +24846,7 @@ "postcss-value-parser": { "version": "4.2.0", "resolved": "https://registry.npmjs.org/postcss-value-parser/-/postcss-value-parser-4.2.0.tgz", - "integrity": "sha512-1NNCs6uurfkVbeXG4S8JFT9t19m45ICnif8zWLd5oPSZ50QnwMfK+H3jv408d4jw/7Bttv5axS5IiHoLaVNHeQ==", - "dev": true + "integrity": "sha512-1NNCs6uurfkVbeXG4S8JFT9t19m45ICnif8zWLd5oPSZ50QnwMfK+H3jv408d4jw/7Bttv5axS5IiHoLaVNHeQ==" }, "prebuild-install": { "version": "7.1.1", @@ -25119,7 +25108,6 @@ "version": "1.0.0", "resolved": "https://registry.npmjs.org/read-cache/-/read-cache-1.0.0.tgz", "integrity": "sha512-Owdv/Ft7IjOgm/i0xvNDZ1LrRANRfew4b2prF3OWMQLxLfu3bS8FVhCsrSCMK4lR56Y9ya+AThoTpDCTxCmpRA==", - "dev": true, "requires": { "pify": "^2.3.0" }, @@ -25127,8 +25115,7 @@ "pify": { "version": "2.3.0", "resolved": "https://registry.npmjs.org/pify/-/pify-2.3.0.tgz", - "integrity": "sha512-udgsAY+fTnvv7kI7aaxbqwWNb0AHiB0qBO89PZKPkoTmGOgdbrHDKD+0B2X4uTfJ/FT1R09r9gTsjUjNJotuog==", - "dev": true + "integrity": "sha512-udgsAY+fTnvv7kI7aaxbqwWNb0AHiB0qBO89PZKPkoTmGOgdbrHDKD+0B2X4uTfJ/FT1R09r9gTsjUjNJotuog==" } } }, @@ -25931,8 +25918,7 @@ "source-map-js": { "version": "1.2.0", "resolved": "https://registry.npmjs.org/source-map-js/-/source-map-js-1.2.0.tgz", - "integrity": "sha512-itJW8lvSA0TXEphiRoawsCksnlf8SyvmFzIhltqAHluXd88pkCd+cXJVHTDwdCr0IzwptSm035IHQktUu1QUMg==", - "dev": true + "integrity": "sha512-itJW8lvSA0TXEphiRoawsCksnlf8SyvmFzIhltqAHluXd88pkCd+cXJVHTDwdCr0IzwptSm035IHQktUu1QUMg==" }, "source-map-loader": { "version": "4.0.1", diff --git a/package.json b/package.json index 94f626d16e..f0caadea1d 100644 --- a/package.json +++ b/package.json @@ -1,5 +1,5 @@ { - "version": "2.72.0", + "version": "2.73.0", "name": "@sjcrh/proteinpaint", "description": "a genomics visualization tool for exploring a cohort's genotype and phenotype data", "main": "server/main.js", diff --git a/rust/package.json b/rust/package.json index 18cf032b59..0f827b159b 100644 --- a/rust/package.json +++ b/rust/package.json @@ -1,5 +1,5 @@ { - "version": "2.61.1", + "version": "2.73.0", "name": "@sjcrh/proteinpaint-rust", "description": "Rust-based utilities for proteinpaint", "main": "index.js", @@ -38,5 +38,5 @@ "devDependencies": { "tape": "^5.2.2" }, - "pp_release_tag": "v2.61.1" + "pp_release_tag": "v2.73.0" } diff --git a/server/package.json b/server/package.json index ec4c5f5a04..fe0636b350 100644 --- a/server/package.json +++ b/server/package.json @@ -1,6 +1,6 @@ { "name": "@sjcrh/proteinpaint-server", - "version": "2.72.0", + "version": "2.73.0", "type": "module", "description": "a genomics visualization tool for exploring a cohort's genotype and phenotype data", "main": "src/app.js", @@ -62,7 +62,7 @@ }, "dependencies": { "@sjcrh/augen": "2.46.0", - "@sjcrh/proteinpaint-rust": "2.61.1", + "@sjcrh/proteinpaint-rust": "2.73.0", "better-sqlite3": "^9.4.1", "body-parser": "^1.15.2", "canvas": "~2.11.2",