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iCount demultiplex --minimum_length cannot work #207

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wjzhangiris opened this issue Sep 14, 2021 · 0 comments

wjzhangiris commented Sep 14, 2021 •

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--minimum_length with default value 15, the output fastq file also contained length 0 read.

command:
iCount demultiplex hnRNPC.fq.gz AGATCGGAAGAGCGGTTCAG NNNGGTTNN NNNTTGTNN
NNNCAATNN NNNACCTNN NNNGGCGNN --out_dir "demultiplexed"

result:

Thanks for your time and all the best,
Iris

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