Plots the MDS (Multi-dimensional scaling) of 3 or more FCS files.
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Updated
Dec 10, 2019 - R
Plots the MDS (Multi-dimensional scaling) of 3 or more FCS files.
Very fast method to read number of events from some / all FCS files in a directory
Work done during rotation with Coleen McNamara & Stefan Bekiranov in UVA BIMS PhD program
R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data
A Python toolbox for quantitative, reproducible flow cytometry analysis
HDStIM: High Dimensional Stimulation Immune Mapping
Profilling of Peripheral Blood Mononuclear Cells using CyTOF
Opens two or more FCS files and creates new files that contain only the Channels common to all.
A Python pipeline for CyTOF data analyses
Analysis scripts for vaccination and challenge study published in Scientific Reports.
Accurate and Efficient Simulation of CyTOF data
Lite version of the tool to analyze and visualize CyTOF data (still under development)
A handy spreadsheet for looking up elemental isotopes by symbol or mass.
A Python package for dimension reduction and evaluation workflows with CyTOF data.
Code for analysis of single cell signaling network kinetics from flow cytometry (CyTOF) datasets
Official implementation of GateNet
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