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<!-- Copyright (C) 2021 MassBank consortium -->
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<!DOCTYPE html>
<html lang="en">
<head>
<title>MassBank News</title>
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<div class="w3-container w3-large">
<h4>
<b>News</b>
</h4>
<p>Dear friends of MassBank,</p>
<p style="font-size: 85%;"><i><b>Update 13 September 2023: </b></i>
Today, we updated the MassBank server to system version 2.2.4 and deployed MassBank-data release <a href="https://github.com/MassBank/MassBank-data/releases/tag/2023.09" target=_blank>2023.09</a>
with the DOI: <a href="https://zenodo.org/record/8308157 " target=_blank>10.5281/zenodo.8308157</a>. We added 810 new mass spectra provided University of Antwerp, 2072 spectra derived by UFZ, 242
new spectra from Eawag, and 56 spectra from University of Birmingham. Welcome to our new contributors!
</p>
<p style="font-size: 85%;"><i><b>Update 07 June 2023: </b></i>
Today, we updated the MassBank server to system version 2.2.3. and deployed MassBank-data release <a href="https://github.com/MassBank/MassBank-data/releases/tag/2023.06" target=_blank>2023.06</a>
with the DOI: <a href="https://zenodo.org/record/zenodo.8014263" target=_blank>10.5281/zenodo.8014263</a>. We added 63 new mass spectra provided by Agilent Technologies, 1481 spectra
of 164 compounds from Eawag, 345 new spectra from MSSJ, some updated spectra from LCSB and 1005 new spectra from US EPA Center for Computational Toxicology and Exposure (CCTE) in cooperation with
Agilent Technologies. Welcome to our new contributors!
</p>
<p style="font-size: 85%;"><i><b>Update 15 December 2022: </b></i>
We just deployed MassBank-data release <a href="https://github.com/MassBank/MassBank-data/releases/tag/2022.12" target=_blank>2022.12</a>
with the DOI: <a href="https://zenodo.org/record/7436494" target=_blank>10.5281/zenodo.7436394</a>. We added 271 new mass spectra
contributed by our new contributor Department of Environmental Science at Stockholm University and 10 new records of MSSJ.
</p>
<p tyle="font-size: 85%;"><i><b>Update 30 August 2022: </b></i>
Welcome to our latest MassBank system version 2.2. We introduced the new MassBank Accession schema.
For reference, visit the section <a href="https://github.com/MassBank/MassBank-web/blob/main/Documentation/MassBankRecordFormat.md#211-accession"
target=_blank>ACCESSION</a> in the <a href="https://github.com/MassBank/MassBank-web/blob/main/Documentation/MassBankRecordFormat.md" target=_blank>
MassBank Record Format</a>. In the case, you observe any problem with MassBank or third-party services due to the new Accession, do not hesitate to contact us.
</p>
<p style="font-size: 85%;"><i><b>Update 3 September 2021: </b></i> MassBank Europe spectra annotations
in <a href="https://pubchem.ncbi.nlm.nih.gov" target=_blank>PubChem</a> are online now.
What a great enhancement! MassBank Europe spectra go online via our new
<a href="https://zenodo.org/record/5383034" target=_blank>MassBank
<b>↔</b> PubChem deposition / annotation repository pipeline</a>
with code developed by <a href="https://git-r3lab.uni.lu/eci/pubchem/-/tree/master/massbank_eu">LCSB-ECI</a>.
Find an example for <a href="https://pubchem.ncbi.nlm.nih.gov/compound/7389#section=LC-MS" target=_blank>arsanilic acid</a> at PubChem.
See also the related <a href="https://twitter.com/ESchymanski/status/1432265879497191429?s=20" target=_blank>tweet</a>.
</p>
<p style="font-size: 85%;"><i><b>Update 5 March 2021: </b></i>
The new MassBank data release is available and deployed on MassBank Europe. We added 159 new mass spectra containing tentatative
mass spectra of pesticide metabolites. They include Markush structures for the first time, for example a mass spectra of the tentatively identified
<a href="https://massbank.eu/MassBank/RecordDisplay?id=HB002826" target=_blank>atrazine-desamine</a>.
The release version is <a href="https://github.com/MassBank/MassBank-data/releases/tag/2021.03" target=_blank>2021.03</a>
with the DOI: <a href="https://doi.org/10.5281/zenodo.4563726" target=_blank>10.5281/zenodo.4563726</a>.
The whole MassBank content is available in NIST msp format for integration in mass spectrometry software.
</p>
<p style="font-size: 85%;"><i><b>Update 8 February 2021: </b></i>
The new MassBank data release is available and deployed on MassBank Europe.
The release version is <a href="https://github.com/MassBank/MassBank-data/releases/tag/2021.02" target=_blank>2021.02</a>
with the DOI: <a href="https://doi.org/10.5281/zenodo.4506480" target=_blank>10.5281/zenodo.4506480</a>.
The whole MassBank content is available in NIST msp format for integration in mass spectrometry software.
The <a href="https://github.com/MassBank/MassBank-data/releases/download/2021.02/MassBank_NIST.msp" target=_blank>MassBank_NIST.msp</a>
file contains all records to be used in vendors' software library search. We also provide a msp file in RIKEN
format for integration in <a href="http://prime.psc.riken.jp/compms/msdial/main.html" target=_blank>MS DIAL</a>.
Enjoy and report your experiences, please!
</p>
<p style="font-size: 85%;"><i><b>Update 20 July 2020: </b></i>
The MassBank developers and MassBank contributors are proud to be part of the
<a href="https://archiveprogram.github.com/" target=_blank>GitHub Archive Programm</a>.
MassBank is now human code heritage as a long term and active open source community!
</p>
<p style="font-size: 85%;"><i><b>Update 16 March 2020: </b></i>
We are proud to announce the publication of new MS library related paper
<a href="https://doi.org/10.1186/s12302-020-00314-9" target=_blank>A European proposal for quality control and quality assurance of tandem mass spectral libraries</a>.
All related mass spectra are available <a href="https://massbank.eu/MassBank/Result.jsp?type=rcdidx&idxtype=site&srchkey=HBM4EU&sortKey=name&sortAction=1&pageNo=1&exec=" target=_blank>HBM4EU library</a>.
</p>
<p style="font-size: 85%;"><i><b>Update 09 March 2020: </b></i>
MassBank Europe is now on <a href="https://pubchem.ncbi.nlm.nih.gov/source/23999" target=_blank>PubChem</a>.
See also on <a href="https://twitter.com/ESchymanski/status/1236954416005160961" target=_blank>Twitter</a>.
</p>
<h4>
<b>Links</b>
</h4>
<p style="font-size: 85%;"><i><b>MassBank community on GitHub</b></i></p>
<ul style="font-size: 85%;">
<li><a href="https://github.com/MassBank" target="_blank">MassBank community on GitHub</a>: Checkout for more information on the community and how to contribute to Massbank.</li>
<li><a href="https://github.com/MassBank/MassBank-data" target=_blank>MassBank Open Access records on GitHub</a>: Contribute your mass spectra and download MassBank spectra for your purposes and re-use.</li>
<li><a href="https://github.com/MassBank/MassBank-web/issues" target=_blank>MassBank Issue Tracker on GitHub</a>: Leave your feedback and issues on MassBank to improve MassBank (GitHub account required).</li>
<li><a href="https://github.com/MassBank/MassBank-data/releases" target=_blank>MassBank Data Releases</a> are available on GitHub</li>
<li><a href="https://zenodo.org/communities/massbankeu/?page=1&size=20" target=_blank>MassBank community on zenodo</a>: Checkout for data releases, reports and presentations regarding MassBank.</li>
</ul>
<p style="font-size: 85%;"><i><b>Metabolomics Spectrum Identifier Resolver</b></i></p>
<p style="font-size: 85%;">The <a href="https:///metabolomics-usi.ucsd.edu" target=_blank>
Metabolomics Spectrum Identifier Resolver</a> is a tool for the high resolution imaging of mass spectra from <a href="https://gnps.ucsd.edu/ProteoSAFe/static/gnps-splash.jsp" target=_blank>GNPS/MassIVE</a>, <a href="https://www.ebi.ac.uk/metabolights">MetaboLights</a>, <a href = "http://ms2lda.org" target=_blank>MS2LDA</a> and <a href="https://massbank.eu/MassBank">MassBank</a> for publications and other purposes. For example <a href=
"https://massbank.eu/MassBank/RecordDisplay.jsp?id=AC000372&dsn=AAFC" target=_blank>MassBank Record: AC000372</a> resolves in
<a href="https://metabolomics-usi.ucsd.edu/spectrum/?usi=mzspec:MASSBANK:AC000372" target=_blank>metalolomics-usi-visulation of AC000372</a>.</p>
<p style="font-size: 85%;"><i><b>MassBank RESTful API</b></i></p>
<p style="font-size: 85%;">A basic RESTful API with simple search functions is available:</p>
<ul style="font-size: 85%;">
<li><a href="https://massbank.eu/MassBank/Result.jsp?splash=splash10-0002-0900000000-f236794b68cee8f6798c">Search by SPLASH</a></li>
<li><a href="https://massbank.eu/MassBank/Result.jsp?inchikey=RYYVLZVUVIJVGH-UHFFFAOYSA-N">Search by InChIKey</a></li>
<li><a href="https://massbank.eu/MassBank/Result.jsp?inchikey=RYYVLZVUVIJVGH">Search by a single block of InChIKey</a></li>
</ul>
<p style="font-size: 85%;">An improved API is in development. Your use cases and ideas for enhancements are appreciated.</p>
</div>
</html>