setup.py

#!/usr/bin/env python
# *- coding: utf-8 -*-
# vim: set expandtab tabstop=4 shiftwidth=4 softtabstop=4 textwidth=79:

"""
Installer of Dr. Disco

[License: GNU General Public License v3 (GPLv3)]

 This file is part of Dr. Disco.

 FuMa is free software: you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
 the Free Software Foundation, either version 3 of the License, or
 (at your option) any later version.

 FuMa is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
 GNU General Public License for more details.
 You should have received a copy of the GNU General Public License
 along with this program. If not, see <http://www.gnu.org/licenses/>.
"""

import drdisco
from setuptools import setup


def get_requirements():
    with open('requirements.txt', 'r') as fh:
        content = fh.read().strip().split()
    return content


setup(name="dr-disco",
      scripts=['bin/dr-disco'],
      packages=["drdisco"],
      test_suite="tests",
      tests_require=['nose2', 'pytest', 'pytest-cov'],
      setup_requires=['scipy', 'numpy'],
      install_requires=[get_requirements()],
      version=drdisco.__version__,
      description="Makes discordant RNA-Seq alignments healthy, and tries to interpret intronic break points",
      author=drdisco.__author__,
      url=drdisco.__homepage__,
      keywords=["rna-seq", "intronic", "break point"],
      classifiers=[
          'Environment :: Console',
          'Intended Audience :: Science/Research',
          'License :: OSI Approved :: GNU General Public License v3 (GPLv3)',
          'Operating System :: OS Independent',
          'Topic :: Scientific/Engineering',
          'Topic :: Scientific/Engineering :: Bio-Informatics'
      ])