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SooLee authored Jun 3, 2019
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Expand Up @@ -41,15 +41,17 @@ API().run_workflow(input_json='myrun.json')
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Note: Python2.7 support is deprecated now (`0.7.0` or after)! Please switch to Python3.6!
Note: Starting `0.8.2`, Tibanna supports local CWL/WDL files as well as shell commands and Snakemake workflows.

Note2: Starting `0.8.0`, one no longer needs to `git clone` the Tibanna repo.
Note2: Python2.7 support is deprecated now (`0.7.0` or after)! Please switch to Python3.6!

Note3: Starting `0.8.0`, one no longer needs to `git clone` the Tibanna repo.
* Please switch from `invoke <command>` to `tibanna <command>`!
* We also renovated the Python API as an inheritable class to allow development around tibanna.

Note3: Tibanna_4dn (extension of Tibanna) is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data.
Note4: Tibanna_4dn (extension of Tibanna) is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data.

Nore4: For more details, see Tibanna [**Documentation**](http://tibanna.readthedocs.io/en/latest).
Nore5: For more details, see Tibanna [**Documentation**](http://tibanna.readthedocs.io/en/latest).
* Also check out our [**paper in _Bioinformatics_**](https://doi.org/10.1093/bioinformatics/btz379).
* A preprint can also be found on [**biorxiv**](https://www.biorxiv.org/content/10.1101/440974v3).

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