added yaml directory

Aveglia · Aug 18, 2022 · 8c1ee89 · 8c1ee89
1 parent aab789a
commit 8c1ee89
Showing 1 changed file with 18 additions and 0 deletions.
diff --git a/bin/yamls/phylogeny_med.yml b/bin/yamls/phylogeny_med.yml
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+# You can use this file to create a conda environment for this pipeline:
+#   conda env create -f env.yml
+name: vAMPirus_phy_med
+channels:
+  - conda-forge
+  - bioconda
+  - anaconda
+  - defaults
+  - genomedk
+dependencies:
+  - python=3.6
+  - trimal=1.4.1
+  - iqtree=2.0.3
+  - modeltest-ng=0.1.6
+  - pip
+  - pip:
+    - oligotyping
+    - treecluster