Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

add a module for gene-set enrichment analysis #129

Open
borauyar opened this issue Apr 12, 2022 · 0 comments
Open

add a module for gene-set enrichment analysis #129

borauyar opened this issue Apr 12, 2022 · 0 comments

Comments

@borauyar
Copy link
Member

  • We could do standard gene-set enrichment analysis as done in e.g. GAGE
  • We could use single-sample gene-set scoring using (e.g. singscore)
  • A similar approach is to find out which cell types are driving the differential expression (see LRcell)
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

1 participant