Support matrix population mixing in convolution scanner - #876
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damonbayer wants to merge 15 commits into
Open
Support matrix population mixing in convolution scanner#876damonbayer wants to merge 15 commits into
damonbayer wants to merge 15 commits into
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damonbayer
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August 28, 2026 15:10
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Various wording tweaks
Co-authored-by: Dylan H. Morris <dylanhmorris@users.noreply.github.com>
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for more information, see https://pre-commit.ci
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Summary
new_convolve_scannerM[i, j]generically as the contribution of componentjto componenti, while preserving scalar and vector behaviorM[target, source], constant and time-varying mixing, and two-population figuresTesting
uv run pytest -m 'not integration'(843 passed, 35 deselected)uv run pre-commit run --files docs/index.md docs/tutorials/.pages docs/tutorials/population_mixing.qmd pyrenew/convolve.py pyrenew/latent/infection_functions.py test/test_convolve.pyQUARTO_PYTHON=.venv/bin/python quarto render docs/tutorials/population_mixing.qmd